Protein–RNA interactions for Protein: P13612

ITGA4, Integrin alpha-4, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4P13612 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
ITGA4P13612 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
ITGA4P13612 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
ITGA4P13612 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
ITGA4P13612 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.76□□□□□ -1.65
ITGA4P13612 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
ITGA4P13612 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
ITGA4P13612 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.75□□□□□ -1.65
ITGA4P13612 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.75□□□□□ -1.65
ITGA4P13612 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.75□□□□□ -1.65
ITGA4P13612 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.75□□□□□ -1.65
ITGA4P13612 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.75□□□□□ -1.65
ITGA4P13612 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
ITGA4P13612 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
ITGA4P13612 MIR383-201ENST00000362257 73 ntBASIC4.75□□□□□ -1.65
ITGA4P13612 SNORA23-201ENST00000365128 182 ntBASIC4.75□□□□□ -1.65
ITGA4P13612 SNORA33.2-201ENST00000365413 134 ntBASIC4.75□□□□□ -1.65
ITGA4P13612 Y_RNA.422-201ENST00000384054 114 ntBASIC4.75□□□□□ -1.65
ITGA4P13612 SNORA68.2-201ENST00000391263 128 ntBASIC4.75□□□□□ -1.65
ITGA4P13612 RPS26P8-201ENST00000393490 348 ntBASIC4.75□□□□□ -1.65
ITGA4P13612 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
ITGA4P13612 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC4.75□□□□□ -1.65
ITGA4P13612 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.75□□□□□ -1.65
ITGA4P13612 AC004866.2-201ENST00000438285 481 ntBASIC4.75□□□□□ -1.65
ITGA4P13612 RPL23AP89-201ENST00000439324 255 ntBASIC4.75□□□□□ -1.65
ITGA4P13612 AC009963.2-201ENST00000453431 138 ntBASIC4.75□□□□□ -1.65
ITGA4P13612 DYNLL1P5-201ENST00000467158 270 ntBASIC4.75□□□□□ -1.65
ITGA4P13612 AC093303.1-201ENST00000514549 295 ntBASIC4.75□□□□□ -1.65
ITGA4P13612 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
ITGA4P13612 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC4.75□□□□□ -1.65
ITGA4P13612 RGS4-209ENST00000531057 544 ntTSL 4 BASIC4.75□□□□□ -1.65
ITGA4P13612 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC4.75□□□□□ -1.65
ITGA4P13612 AC126177.3-201ENST00000551839 688 ntBASIC4.75□□□□□ -1.65
ITGA4P13612 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.75□□□□□ -1.65
ITGA4P13612 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.75□□□□□ -1.65
ITGA4P13612 AC007224.1-201ENST00000564410 144 ntBASIC4.75□□□□□ -1.65
ITGA4P13612 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC4.75□□□□□ -1.65
ITGA4P13612 AC138761.3-201ENST00000579993 334 ntBASIC4.75□□□□□ -1.65
ITGA4P13612 AC023043.2-201ENST00000589678 1026 ntBASIC4.75□□□□□ -1.65
ITGA4P13612 AL138889.2-201ENST00000603883 242 ntBASIC4.75□□□□□ -1.65
ITGA4P13612 ATP1B3P1-201ENST00000605365 821 ntBASIC4.75□□□□□ -1.65
ITGA4P13612 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
ITGA4P13612 AC244517.12-201ENST00000623581 663 ntBASIC4.75□□□□□ -1.65
ITGA4P13612 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
ITGA4P13612 AL137003.2-201ENST00000606924 2538 ntBASIC4.75□□□□□ -1.65
ITGA4P13612 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
ITGA4P13612 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.74□□□□□ -1.65
ITGA4P13612 FAM91A3P-201ENST00000456826 2544 ntBASIC4.74□□□□□ -1.65
ITGA4P13612 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.74□□□□□ -1.65
ITGA4P13612 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
ITGA4P13612 Y_RNA.146-201ENST00000363549 102 ntBASIC4.74□□□□□ -1.65
ITGA4P13612 AC110754.1-201ENST00000399740 601 ntBASIC4.74□□□□□ -1.65
ITGA4P13612 MIR1193-201ENST00000408109 78 ntBASIC4.74□□□□□ -1.65
ITGA4P13612 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC4.74□□□□□ -1.65
ITGA4P13612 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC4.74□□□□□ -1.65
ITGA4P13612 AL132765.1-201ENST00000434165 553 ntBASIC4.74□□□□□ -1.65
ITGA4P13612 FABP5P14-201ENST00000437273 393 ntBASIC4.74□□□□□ -1.65
ITGA4P13612 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
ITGA4P13612 MRPS31P2-201ENST00000451581 518 ntBASIC4.74□□□□□ -1.65
ITGA4P13612 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC4.74□□□□□ -1.65
ITGA4P13612 RPS27P27-201ENST00000498779 255 ntBASIC4.74□□□□□ -1.65
ITGA4P13612 TBCAP3-201ENST00000512475 312 ntBASIC4.74□□□□□ -1.65
ITGA4P13612 AC008694.2-201ENST00000517591 306 ntBASIC4.74□□□□□ -1.65
ITGA4P13612 IMMP1LP2-201ENST00000552954 492 ntBASIC4.74□□□□□ -1.65
ITGA4P13612 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC4.74□□□□□ -1.65
ITGA4P13612 AC025884.1-201ENST00000556034 378 ntBASIC4.74□□□□□ -1.65
ITGA4P13612 TVP23BP1-201ENST00000557500 617 ntBASIC4.74□□□□□ -1.65
ITGA4P13612 MTND6P33-201ENST00000571794 183 ntBASIC4.74□□□□□ -1.65
ITGA4P13612 AC016925.2-201ENST00000605108 242 ntBASIC4.74□□□□□ -1.65
ITGA4P13612 AC009570.1-201ENST00000609599 745 ntBASIC4.74□□□□□ -1.65
ITGA4P13612 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
ITGA4P13612 AL445363.3-201ENST00000623080 671 ntBASIC4.74□□□□□ -1.65
ITGA4P13612 AC008013.2-202ENST00000637965 364 ntBASIC4.74□□□□□ -1.65
ITGA4P13612 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
ITGA4P13612 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.74□□□□□ -1.65
ITGA4P13612 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC4.74□□□□□ -1.65
ITGA4P13612 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
ITGA4P13612 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC4.74□□□□□ -1.65
ITGA4P13612 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.74□□□□□ -1.65
ITGA4P13612 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
ITGA4P13612 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.73□□□□□ -1.65
ITGA4P13612 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.73□□□□□ -1.65
ITGA4P13612 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
ITGA4P13612 Y_RNA.212-201ENST00000364177 102 ntBASIC4.73□□□□□ -1.65
ITGA4P13612 RNA5SP175-201ENST00000364275 119 ntBASIC4.73□□□□□ -1.65
ITGA4P13612 Y_RNA.395-201ENST00000383945 109 ntBASIC4.73□□□□□ -1.65
ITGA4P13612 RNU1-44P-201ENST00000384453 163 ntBASIC4.73□□□□□ -1.65
ITGA4P13612 SNORD70.1-201ENST00000391007 85 ntBASIC4.73□□□□□ -1.65
ITGA4P13612 RNA5SP111-201ENST00000411386 101 ntBASIC4.73□□□□□ -1.65
ITGA4P13612 SKA2P1-201ENST00000425592 390 ntBASIC4.73□□□□□ -1.65
ITGA4P13612 AC090774.1-201ENST00000435925 246 ntBASIC4.73□□□□□ -1.65
ITGA4P13612 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC4.73□□□□□ -1.65
ITGA4P13612 AC104058.1-201ENST00000448028 297 ntBASIC4.73□□□□□ -1.65
ITGA4P13612 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC4.73□□□□□ -1.65
ITGA4P13612 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC4.73□□□□□ -1.65
ITGA4P13612 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC4.73□□□□□ -1.65
ITGA4P13612 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC4.73□□□□□ -1.65
ITGA4P13612 AP006587.4-201ENST00000526053 529 ntBASIC4.73□□□□□ -1.65
ITGA4P13612 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.73□□□□□ -1.65
ITGA4P13612 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms