Protein–RNA interactions for Protein: P10586

PTPRF, Receptor-type tyrosine-protein phosphatase F, humanhuman

Predictions only

Length 1,907 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRFP10586 RNU6-1249P-201ENST00000363237 111 ntBASIC1.75□□□□□ -2.13
PTPRFP10586 RNU6-263P-201ENST00000363811 107 ntBASIC1.75□□□□□ -2.13
PTPRFP10586 RNU6-173P-201ENST00000364215 104 ntBASIC1.75□□□□□ -2.13
PTPRFP10586 MIR499A-201ENST00000384903 122 ntBASIC1.75□□□□□ -2.13
PTPRFP10586 MIR489-201ENST00000384923 84 ntBASIC1.75□□□□□ -2.13
PTPRFP10586 RPL23AP29-201ENST00000397284 453 ntBASIC1.75□□□□□ -2.13
PTPRFP10586 RNU4-72P-201ENST00000410754 173 ntBASIC1.75□□□□□ -2.13
PTPRFP10586 RPL7P30-201ENST00000420888 709 ntBASIC1.75□□□□□ -2.13
PTPRFP10586 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC1.75□□□□□ -2.13
PTPRFP10586 GTF2IP7-202ENST00000436677 309 ntBASIC1.75□□□□□ -2.13
PTPRFP10586 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.75□□□□□ -2.13
PTPRFP10586 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC1.75□□□□□ -2.13
PTPRFP10586 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC1.75□□□□□ -2.13
PTPRFP10586 KLRA1P-201ENST00000503499 986 ntBASIC1.75□□□□□ -2.13
PTPRFP10586 SNORA31.8-201ENST00000516327 108 ntBASIC1.75□□□□□ -2.13
PTPRFP10586 NDUFA5P6-201ENST00000542110 379 ntBASIC1.75□□□□□ -2.13
PTPRFP10586 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC1.75□□□□□ -2.13
PTPRFP10586 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.75□□□□□ -2.13
PTPRFP10586 AL590282.1-201ENST00000610379 1136 ntBASIC1.75□□□□□ -2.13
PTPRFP10586 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
PTPRFP10586 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
PTPRFP10586 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
PTPRFP10586 RPS15AP40-201ENST00000419621 391 ntBASIC1.74□□□□□ -2.13
PTPRFP10586 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC1.74□□□□□ -2.13
PTPRFP10586 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC1.74□□□□□ -2.13
PTPRFP10586 AC008427.1-201ENST00000503102 655 ntBASIC1.74□□□□□ -2.13
PTPRFP10586 OR5BM1P-201ENST00000512021 366 ntBASIC1.74□□□□□ -2.13
PTPRFP10586 SNORA31.23-201ENST00000517219 133 ntBASIC1.74□□□□□ -2.13
PTPRFP10586 HMGB1P46-201ENST00000520062 610 ntBASIC1.74□□□□□ -2.13
PTPRFP10586 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC1.74□□□□□ -2.13
PTPRFP10586 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC1.74□□□□□ -2.13
PTPRFP10586 MIR6504-201ENST00000613520 61 ntBASIC1.74□□□□□ -2.13
PTPRFP10586 AL355810.1-201ENST00000614629 552 ntBASIC1.74□□□□□ -2.13
PTPRFP10586 HPVC1-201ENST00000629899 1198 ntBASIC1.74□□□□□ -2.13
PTPRFP10586 AC027514.1-201ENST00000588561 1603 ntBASIC1.74□□□□□ -2.13
PTPRFP10586 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
PTPRFP10586 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
PTPRFP10586 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
PTPRFP10586 RNU6-670P-201ENST00000364312 104 ntBASIC1.74□□□□□ -2.13
PTPRFP10586 AC096632.1-201ENST00000427395 310 ntBASIC1.74□□□□□ -2.13
PTPRFP10586 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC1.74□□□□□ -2.13
PTPRFP10586 RPL7P29-201ENST00000437151 728 ntBASIC1.74□□□□□ -2.13
PTPRFP10586 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC1.74□□□□□ -2.13
PTPRFP10586 CCNB1IP1P3-201ENST00000454702 829 ntBASIC1.74□□□□□ -2.13
PTPRFP10586 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC1.74□□□□□ -2.13
PTPRFP10586 LY96-202ENST00000518893 430 ntTSL 3 BASIC1.74□□□□□ -2.13
PTPRFP10586 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
PTPRFP10586 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC1.74□□□□□ -2.13
PTPRFP10586 COX6CP3-201ENST00000580869 223 ntBASIC1.74□□□□□ -2.13
PTPRFP10586 AL353770.2-201ENST00000620024 78 ntBASIC1.74□□□□□ -2.13
PTPRFP10586 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC1.74□□□□□ -2.13
PTPRFP10586 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.74□□□□□ -2.13
PTPRFP10586 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC1.73□□□□□ -2.13
PTPRFP10586 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC1.73□□□□□ -2.13
PTPRFP10586 AC092798.1-201ENST00000458542 409 ntBASIC1.73□□□□□ -2.13
PTPRFP10586 AC104685.1-201ENST00000502445 371 ntBASIC1.73□□□□□ -2.13
PTPRFP10586 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.73□□□□□ -2.13
PTPRFP10586 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC1.73□□□□□ -2.13
PTPRFP10586 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC1.73□□□□□ -2.13
PTPRFP10586 AC004923.2-201ENST00000529649 369 ntBASIC1.73□□□□□ -2.13
PTPRFP10586 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC1.73□□□□□ -2.13
PTPRFP10586 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC1.73□□□□□ -2.13
PTPRFP10586 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC1.73□□□□□ -2.13
PTPRFP10586 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
PTPRFP10586 AC007342.9-201ENST00000623877 1385 ntBASIC1.73□□□□□ -2.13
PTPRFP10586 IL33-203ENST00000456383 2501 ntTSL 5 BASIC1.73□□□□□ -2.13
PTPRFP10586 MIR96-201ENST00000362288 78 ntBASIC1.72□□□□□ -2.13
PTPRFP10586 Y_RNA.540-201ENST00000384638 111 ntBASIC1.72□□□□□ -2.13
PTPRFP10586 AL136372.1-201ENST00000403060 228 ntBASIC1.72□□□□□ -2.13
PTPRFP10586 TRAPPC2P4-201ENST00000421750 331 ntBASIC1.72□□□□□ -2.13
PTPRFP10586 AL354695.1-201ENST00000427935 228 ntBASIC1.72□□□□□ -2.13
PTPRFP10586 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC1.72□□□□□ -2.13
PTPRFP10586 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC1.72□□□□□ -2.13
PTPRFP10586 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
PTPRFP10586 RN7SL274P-201ENST00000492268 272 ntBASIC1.72□□□□□ -2.13
PTPRFP10586 RNU6-889P-201ENST00000517189 103 ntBASIC1.72□□□□□ -2.13
PTPRFP10586 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC1.72□□□□□ -2.13
PTPRFP10586 AC074029.2-201ENST00000551045 634 ntBASIC1.72□□□□□ -2.13
PTPRFP10586 AC090897.2-201ENST00000581715 130 ntBASIC1.72□□□□□ -2.13
PTPRFP10586 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC1.72□□□□□ -2.13
PTPRFP10586 AC018755.4-201ENST00000619715 454 ntBASIC1.72□□□□□ -2.13
PTPRFP10586 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC1.72□□□□□ -2.13
PTPRFP10586 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.72□□□□□ -2.13
PTPRFP10586 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
PTPRFP10586 MTND5P35-201ENST00000557537 1720 ntBASIC1.72□□□□□ -2.13
PTPRFP10586 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
PTPRFP10586 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC1.72□□□□□ -2.13
PTPRFP10586 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
PTPRFP10586 RNU6-234P-201ENST00000365229 104 ntBASIC1.72□□□□□ -2.13
PTPRFP10586 RNU6-452P-201ENST00000384406 107 ntBASIC1.72□□□□□ -2.13
PTPRFP10586 RNA5SP38-201ENST00000410750 119 ntBASIC1.72□□□□□ -2.13
PTPRFP10586 TATDN1P1-201ENST00000414123 891 ntBASIC1.72□□□□□ -2.13
PTPRFP10586 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.72□□□□□ -2.13
PTPRFP10586 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC1.72□□□□□ -2.13
PTPRFP10586 RPL35AP22-201ENST00000436855 335 ntBASIC1.72□□□□□ -2.13
PTPRFP10586 AL645638.1-201ENST00000440519 361 ntBASIC1.72□□□□□ -2.13
PTPRFP10586 RPS29P29-201ENST00000456396 171 ntBASIC1.72□□□□□ -2.13
PTPRFP10586 RPS27P21-201ENST00000486977 252 ntBASIC1.72□□□□□ -2.13
PTPRFP10586 HMGB1P22-201ENST00000505315 124 ntBASIC1.72□□□□□ -2.13
PTPRFP10586 RNA5SP490-201ENST00000517141 136 ntBASIC1.72□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 142.9 ms