Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.18□□□□□ -1.9
RAB40ALP0C0E4 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
RAB40ALP0C0E4 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
RAB40ALP0C0E4 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
RAB40ALP0C0E4 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
RAB40ALP0C0E4 AC093908.1-201ENST00000623125 8092 ntBASIC3.17□□□□□ -1.9
RAB40ALP0C0E4 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.17□□□□□ -1.9
RAB40ALP0C0E4 RPL7P26-201ENST00000333817 754 ntBASIC3.17□□□□□ -1.9
RAB40ALP0C0E4 U3.4-201ENST00000363352 213 ntBASIC3.17□□□□□ -1.9
RAB40ALP0C0E4 RNY3P10-201ENST00000384764 102 ntBASIC3.17□□□□□ -1.9
RAB40ALP0C0E4 MIR591-201ENST00000385290 95 ntBASIC3.17□□□□□ -1.9
RAB40ALP0C0E4 RNU4-47P-201ENST00000410876 114 ntBASIC3.17□□□□□ -1.9
RAB40ALP0C0E4 ELOCP17-201ENST00000414751 326 ntBASIC3.17□□□□□ -1.9
RAB40ALP0C0E4 AC098826.1-201ENST00000433943 471 ntBASIC3.17□□□□□ -1.9
RAB40ALP0C0E4 AC092573.2-201ENST00000434546 243 ntBASIC3.17□□□□□ -1.9
RAB40ALP0C0E4 MTND2P22-201ENST00000444325 1033 ntBASIC3.17□□□□□ -1.9
RAB40ALP0C0E4 AL357552.1-201ENST00000445254 415 ntBASIC3.17□□□□□ -1.9
RAB40ALP0C0E4 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC3.17□□□□□ -1.9
RAB40ALP0C0E4 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC3.17□□□□□ -1.9
RAB40ALP0C0E4 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC3.17□□□□□ -1.9
RAB40ALP0C0E4 PHBP14-201ENST00000512887 367 ntBASIC3.17□□□□□ -1.9
RAB40ALP0C0E4 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
RAB40ALP0C0E4 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC3.17□□□□□ -1.9
RAB40ALP0C0E4 AL356057.1-201ENST00000533798 831 ntBASIC3.17□□□□□ -1.9
RAB40ALP0C0E4 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC3.17□□□□□ -1.9
RAB40ALP0C0E4 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC3.17□□□□□ -1.9
RAB40ALP0C0E4 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.17□□□□□ -1.9
RAB40ALP0C0E4 AL157394.1-201ENST00000562983 1224 ntBASIC3.17□□□□□ -1.9
RAB40ALP0C0E4 MIR5004-201ENST00000579078 107 ntBASIC3.17□□□□□ -1.9
RAB40ALP0C0E4 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.17□□□□□ -1.9
RAB40ALP0C0E4 AC110760.3-201ENST00000598794 467 ntBASIC3.17□□□□□ -1.9
RAB40ALP0C0E4 AC010620.1-201ENST00000601088 1102 ntBASIC3.17□□□□□ -1.9
RAB40ALP0C0E4 AC008277.2-201ENST00000605196 797 ntBASIC3.17□□□□□ -1.9
RAB40ALP0C0E4 AC073657.2-201ENST00000605661 303 ntBASIC3.17□□□□□ -1.9
RAB40ALP0C0E4 AC239868.4-201ENST00000608318 671 ntBASIC3.17□□□□□ -1.9
RAB40ALP0C0E4 AC004696.1-201ENST00000614345 607 ntBASIC3.17□□□□□ -1.9
RAB40ALP0C0E4 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.17□□□□□ -1.9
RAB40ALP0C0E4 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.17□□□□□ -1.9
RAB40ALP0C0E4 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
RAB40ALP0C0E4 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
RAB40ALP0C0E4 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
RAB40ALP0C0E4 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
RAB40ALP0C0E4 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.16□□□□□ -1.9
RAB40ALP0C0E4 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.16□□□□□ -1.9
RAB40ALP0C0E4 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
RAB40ALP0C0E4 RNY4P16-201ENST00000364768 94 ntBASIC3.16□□□□□ -1.9
RAB40ALP0C0E4 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.16□□□□□ -1.9
RAB40ALP0C0E4 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
RAB40ALP0C0E4 RPS4XP3-201ENST00000398541 413 ntBASIC3.16□□□□□ -1.9
RAB40ALP0C0E4 RN7SKP140-201ENST00000411196 284 ntBASIC3.16□□□□□ -1.9
RAB40ALP0C0E4 AC096664.2-201ENST00000411843 406 ntBASIC3.16□□□□□ -1.9
RAB40ALP0C0E4 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC3.16□□□□□ -1.9
RAB40ALP0C0E4 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.16□□□□□ -1.9
RAB40ALP0C0E4 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC3.16□□□□□ -1.9
RAB40ALP0C0E4 USP12PX-201ENST00000432383 1057 ntBASIC3.16□□□□□ -1.9
RAB40ALP0C0E4 BX679664.1-201ENST00000434429 253 ntBASIC3.16□□□□□ -1.9
RAB40ALP0C0E4 HMGN2P20-201ENST00000437531 273 ntBASIC3.16□□□□□ -1.9
RAB40ALP0C0E4 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.16□□□□□ -1.9
RAB40ALP0C0E4 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.16□□□□□ -1.9
RAB40ALP0C0E4 AC009237.8-201ENST00000445492 379 ntBASIC3.16□□□□□ -1.9
RAB40ALP0C0E4 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.16□□□□□ -1.9
RAB40ALP0C0E4 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC3.16□□□□□ -1.9
RAB40ALP0C0E4 HMGB3P8-201ENST00000449709 577 ntBASIC3.16□□□□□ -1.9
RAB40ALP0C0E4 AC009961.3-201ENST00000449832 765 ntBASIC3.16□□□□□ -1.9
RAB40ALP0C0E4 AC115115.1-201ENST00000449927 248 ntBASIC3.16□□□□□ -1.9
RAB40ALP0C0E4 SSXP1-201ENST00000453640 473 ntBASIC3.16□□□□□ -1.9
RAB40ALP0C0E4 RN7SL330P-201ENST00000469709 307 ntBASIC3.16□□□□□ -1.9
RAB40ALP0C0E4 AC010631.1-201ENST00000474150 156 ntBASIC3.16□□□□□ -1.9
RAB40ALP0C0E4 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.16□□□□□ -1.9
RAB40ALP0C0E4 AC114797.1-201ENST00000514003 728 ntBASIC3.16□□□□□ -1.9
RAB40ALP0C0E4 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.16□□□□□ -1.9
RAB40ALP0C0E4 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC3.16□□□□□ -1.9
RAB40ALP0C0E4 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.16□□□□□ -1.9
RAB40ALP0C0E4 SNORA70.19-201ENST00000516717 90 ntBASIC3.16□□□□□ -1.9
RAB40ALP0C0E4 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.16□□□□□ -1.9
RAB40ALP0C0E4 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.16□□□□□ -1.9
RAB40ALP0C0E4 AC004024.1-201ENST00000549244 247 ntBASIC3.16□□□□□ -1.9
RAB40ALP0C0E4 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC3.16□□□□□ -1.9
RAB40ALP0C0E4 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.16□□□□□ -1.9
RAB40ALP0C0E4 AC012414.6-201ENST00000568241 401 ntBASIC3.16□□□□□ -1.9
RAB40ALP0C0E4 MIR5047-201ENST00000579212 100 ntBASIC3.16□□□□□ -1.9
RAB40ALP0C0E4 BNIP3P8-201ENST00000597863 560 ntBASIC3.16□□□□□ -1.9
RAB40ALP0C0E4 RNU6-87P-201ENST00000607561 108 ntBASIC3.16□□□□□ -1.9
RAB40ALP0C0E4 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC3.16□□□□□ -1.9
RAB40ALP0C0E4 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC3.16□□□□□ -1.9
RAB40ALP0C0E4 AL158063.1-201ENST00000615349 536 ntBASIC3.16□□□□□ -1.9
RAB40ALP0C0E4 SNHG22-203ENST00000617833 660 ntBASIC3.16□□□□□ -1.9
RAB40ALP0C0E4 Z69908.1-201ENST00000622603 247 ntBASIC3.16□□□□□ -1.9
RAB40ALP0C0E4 AC118273.1-201ENST00000525324 3006 ntBASIC3.16□□□□□ -1.9
RAB40ALP0C0E4 AC005183.1-201ENST00000603687 1979 ntBASIC3.16□□□□□ -1.9
RAB40ALP0C0E4 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.15□□□□□ -1.9
RAB40ALP0C0E4 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
RAB40ALP0C0E4 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.15□□□□□ -1.9
RAB40ALP0C0E4 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
RAB40ALP0C0E4 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.15□□□□□ -1.9
RAB40ALP0C0E4 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.91
RAB40ALP0C0E4 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
RAB40ALP0C0E4 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
RAB40ALP0C0E4 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
RAB40ALP0C0E4 FGF7P2-201ENST00000332473 296 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms