Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 SNORA68.1-201ENST00000364537 132 ntBASIC1.95□□□□□ -2.1
HLA-DQB2P05538 RNU6-481P-201ENST00000384194 107 ntBASIC1.95□□□□□ -2.1
HLA-DQB2P05538 SNORA51.11-201ENST00000384442 131 ntBASIC1.95□□□□□ -2.1
HLA-DQB2P05538 RNU6-878P-201ENST00000384578 110 ntBASIC1.95□□□□□ -2.1
HLA-DQB2P05538 U3.20-201ENST00000390909 217 ntBASIC1.95□□□□□ -2.1
HLA-DQB2P05538 MIR1290-201ENST00000408735 78 ntBASIC1.95□□□□□ -2.1
HLA-DQB2P05538 RNU2-43P-201ENST00000410306 190 ntBASIC1.95□□□□□ -2.1
HLA-DQB2P05538 RPL17P12-201ENST00000413391 526 ntBASIC1.95□□□□□ -2.1
HLA-DQB2P05538 AL136133.1-201ENST00000413694 376 ntBASIC1.95□□□□□ -2.1
HLA-DQB2P05538 AC092634.6-201ENST00000418558 192 ntBASIC1.95□□□□□ -2.1
HLA-DQB2P05538 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC1.95□□□□□ -2.1
HLA-DQB2P05538 EIF1AXP1-201ENST00000419267 435 ntBASIC1.95□□□□□ -2.1
HLA-DQB2P05538 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC1.95□□□□□ -2.1
HLA-DQB2P05538 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.95□□□□□ -2.1
HLA-DQB2P05538 TAAR7P-201ENST00000436141 242 ntBASIC1.95□□□□□ -2.1
HLA-DQB2P05538 AL096803.2-201ENST00000450032 677 ntBASIC1.95□□□□□ -2.1
HLA-DQB2P05538 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC1.95□□□□□ -2.1
HLA-DQB2P05538 RNU7-23P-201ENST00000459465 62 ntBASIC1.95□□□□□ -2.1
HLA-DQB2P05538 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC1.95□□□□□ -2.1
HLA-DQB2P05538 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC1.95□□□□□ -2.1
HLA-DQB2P05538 AC092436.1-201ENST00000506450 503 ntBASIC1.95□□□□□ -2.1
HLA-DQB2P05538 AC114322.1-201ENST00000506771 926 ntBASIC1.95□□□□□ -2.1
HLA-DQB2P05538 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC1.95□□□□□ -2.1
HLA-DQB2P05538 OR4H6P-202ENST00000603819 340 ntBASIC1.95□□□□□ -2.1
HLA-DQB2P05538 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC1.95□□□□□ -2.1
HLA-DQB2P05538 AC004852.3-201ENST00000614131 326 ntBASIC1.95□□□□□ -2.1
HLA-DQB2P05538 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.95□□□□□ -2.1
HLA-DQB2P05538 AC090772.4-201ENST00000623599 362 ntBASIC1.95□□□□□ -2.1
HLA-DQB2P05538 AL512506.2-201ENST00000624472 458 ntBASIC1.95□□□□□ -2.1
HLA-DQB2P05538 AC026634.1-201ENST00000634369 198 ntBASIC1.95□□□□□ -2.1
HLA-DQB2P05538 AL590396.4-201ENST00000636779 956 ntBASIC1.95□□□□□ -2.1
HLA-DQB2P05538 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
HLA-DQB2P05538 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
HLA-DQB2P05538 RNU6-839P-201ENST00000363347 108 ntBASIC1.94□□□□□ -2.1
HLA-DQB2P05538 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC1.94□□□□□ -2.1
HLA-DQB2P05538 RNU6-657P-201ENST00000383904 107 ntBASIC1.94□□□□□ -2.1
HLA-DQB2P05538 RNU6-1035P-201ENST00000384477 107 ntBASIC1.94□□□□□ -2.1
HLA-DQB2P05538 MIR524-201ENST00000385242 87 ntBASIC1.94□□□□□ -2.1
HLA-DQB2P05538 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
HLA-DQB2P05538 TMSB4XP8-201ENST00000402089 135 ntBASIC1.94□□□□□ -2.1
HLA-DQB2P05538 TMSB4XP6-201ENST00000415187 135 ntBASIC1.94□□□□□ -2.1
HLA-DQB2P05538 SFR1P2-201ENST00000421841 730 ntBASIC1.94□□□□□ -2.1
HLA-DQB2P05538 BEND7P1-201ENST00000422058 457 ntBASIC1.94□□□□□ -2.1
HLA-DQB2P05538 TMSB4XP1-201ENST00000424567 135 ntBASIC1.94□□□□□ -2.1
HLA-DQB2P05538 PSMA6P3-201ENST00000428242 164 ntBASIC1.94□□□□□ -2.1
HLA-DQB2P05538 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
HLA-DQB2P05538 AL512637.2-201ENST00000431287 1256 ntBASIC1.94□□□□□ -2.1
HLA-DQB2P05538 AC234064.1-201ENST00000436312 247 ntBASIC1.94□□□□□ -2.1
HLA-DQB2P05538 AL592447.1-201ENST00000447592 540 ntBASIC1.94□□□□□ -2.1
HLA-DQB2P05538 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC1.94□□□□□ -2.1
HLA-DQB2P05538 AC107626.1-201ENST00000471084 183 ntBASIC1.94□□□□□ -2.1
HLA-DQB2P05538 MRPL42P6-201ENST00000486397 371 ntBASIC1.94□□□□□ -2.1
HLA-DQB2P05538 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC1.94□□□□□ -2.1
HLA-DQB2P05538 HMGB1P1-201ENST00000522557 636 ntBASIC1.94□□□□□ -2.1
HLA-DQB2P05538 AC068339.2-201ENST00000534395 618 ntBASIC1.94□□□□□ -2.1
HLA-DQB2P05538 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC1.94□□□□□ -2.1
HLA-DQB2P05538 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
HLA-DQB2P05538 YWHAZP1-201ENST00000556286 722 ntBASIC1.94□□□□□ -2.1
HLA-DQB2P05538 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC1.94□□□□□ -2.1
HLA-DQB2P05538 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC1.94□□□□□ -2.1
HLA-DQB2P05538 ZNF92P2-201ENST00000600543 1059 ntBASIC1.94□□□□□ -2.1
HLA-DQB2P05538 AC013553.2-201ENST00000604244 589 ntBASIC1.94□□□□□ -2.1
HLA-DQB2P05538 AC002487.1-201ENST00000604565 994 ntBASIC1.94□□□□□ -2.1
HLA-DQB2P05538 AC087241.4-201ENST00000612441 480 ntBASIC1.94□□□□□ -2.1
HLA-DQB2P05538 AC006213.4-201ENST00000616184 634 ntBASIC1.94□□□□□ -2.1
HLA-DQB2P05538 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC1.94□□□□□ -2.1
HLA-DQB2P05538 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC1.94□□□□□ -2.1
HLA-DQB2P05538 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC1.94□□□□□ -2.1
HLA-DQB2P05538 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC1.94□□□□□ -2.1
HLA-DQB2P05538 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
HLA-DQB2P05538 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
HLA-DQB2P05538 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC1.93□□□□□ -2.1
HLA-DQB2P05538 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
HLA-DQB2P05538 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
HLA-DQB2P05538 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
HLA-DQB2P05538 RNU6-575P-201ENST00000411326 105 ntBASIC1.93□□□□□ -2.1
HLA-DQB2P05538 NDUFB4P7-201ENST00000423198 363 ntBASIC1.93□□□□□ -2.1
HLA-DQB2P05538 UBE2V1P13-201ENST00000436983 439 ntBASIC1.93□□□□□ -2.1
HLA-DQB2P05538 AL121871.1-201ENST00000443413 436 ntBASIC1.93□□□□□ -2.1
HLA-DQB2P05538 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC1.93□□□□□ -2.1
HLA-DQB2P05538 MTND2P3-201ENST00000452458 470 ntBASIC1.93□□□□□ -2.1
HLA-DQB2P05538 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC1.93□□□□□ -2.1
HLA-DQB2P05538 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC1.93□□□□□ -2.1
HLA-DQB2P05538 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC1.93□□□□□ -2.1
HLA-DQB2P05538 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC1.93□□□□□ -2.1
HLA-DQB2P05538 MRPS36P2-201ENST00000512569 299 ntBASIC1.93□□□□□ -2.1
HLA-DQB2P05538 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC1.93□□□□□ -2.1
HLA-DQB2P05538 SNORA48.9-201ENST00000516419 162 ntBASIC1.93□□□□□ -2.1
HLA-DQB2P05538 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC1.93□□□□□ -2.1
HLA-DQB2P05538 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC1.93□□□□□ -2.1
HLA-DQB2P05538 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC1.93□□□□□ -2.1
HLA-DQB2P05538 AC011611.5-201ENST00000552477 578 ntBASIC1.93□□□□□ -2.1
HLA-DQB2P05538 MTATP6P25-201ENST00000574491 261 ntBASIC1.93□□□□□ -2.1
HLA-DQB2P05538 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC1.93□□□□□ -2.1
HLA-DQB2P05538 MIR3945-201ENST00000581853 98 ntBASIC1.93□□□□□ -2.1
HLA-DQB2P05538 AL671309.1-201ENST00000603750 544 ntBASIC1.93□□□□□ -2.1
HLA-DQB2P05538 AL031176.1-201ENST00000604554 466 ntBASIC1.93□□□□□ -2.1
HLA-DQB2P05538 AP005137.2-201ENST00000609238 400 ntBASIC1.93□□□□□ -2.1
HLA-DQB2P05538 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC1.93□□□□□ -2.1
HLA-DQB2P05538 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms