Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 RPS20P20-201ENST00000460498 340 ntBASIC3.9□□□□□ -1.79
TOP3BO95985 AP001992.1-205ENST00000462248 379 ntBASIC3.9□□□□□ -1.79
TOP3BO95985 RPS4XP10-201ENST00000465034 731 ntBASIC3.9□□□□□ -1.79
TOP3BO95985 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC3.9□□□□□ -1.79
TOP3BO95985 AC034222.1-201ENST00000494052 532 ntBASIC3.9□□□□□ -1.79
TOP3BO95985 NAF1-205ENST00000509434 385 ntTSL 3 BASIC3.9□□□□□ -1.79
TOP3BO95985 FGF7P4-201ENST00000509595 295 ntBASIC3.9□□□□□ -1.79
TOP3BO95985 TXNP6-201ENST00000510190 310 ntBASIC3.9□□□□□ -1.79
TOP3BO95985 AC010486.1-201ENST00000511793 424 ntBASIC3.9□□□□□ -1.79
TOP3BO95985 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC3.9□□□□□ -1.79
TOP3BO95985 Vault.3-201ENST00000516676 95 ntBASIC3.9□□□□□ -1.79
TOP3BO95985 RNU6-201P-201ENST00000517100 61 ntBASIC3.9□□□□□ -1.79
TOP3BO95985 IGKV2D-36-201ENST00000518643 226 ntBASIC3.9□□□□□ -1.79
TOP3BO95985 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.9□□□□□ -1.79
TOP3BO95985 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC3.9□□□□□ -1.79
TOP3BO95985 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.9□□□□□ -1.79
TOP3BO95985 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.9□□□□□ -1.79
TOP3BO95985 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.9□□□□□ -1.79
TOP3BO95985 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
TOP3BO95985 AP001429.1-201ENST00000602568 530 ntBASIC3.9□□□□□ -1.79
TOP3BO95985 LLPHP1-201ENST00000603571 367 ntBASIC3.9□□□□□ -1.79
TOP3BO95985 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.9□□□□□ -1.79
TOP3BO95985 uc_338.32-201ENST00000615087 172 ntBASIC3.9□□□□□ -1.79
TOP3BO95985 YWHAEP7-203ENST00000622054 312 ntBASIC3.9□□□□□ -1.79
TOP3BO95985 AC090574.1-201ENST00000623186 233 ntBASIC3.9□□□□□ -1.79
TOP3BO95985 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.9□□□□□ -1.79
TOP3BO95985 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
TOP3BO95985 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.9□□□□□ -1.79
TOP3BO95985 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.9□□□□□ -1.79
TOP3BO95985 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.9□□□□□ -1.79
TOP3BO95985 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
TOP3BO95985 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.9□□□□□ -1.79
TOP3BO95985 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
TOP3BO95985 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.9□□□□□ -1.79
TOP3BO95985 PRO1804-201ENST00000623780 2050 ntBASIC3.9□□□□□ -1.79
TOP3BO95985 AL049780.3-201ENST00000624612 1583 ntBASIC3.89□□□□□ -1.79
TOP3BO95985 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
TOP3BO95985 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
TOP3BO95985 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
TOP3BO95985 RNU6-853P-201ENST00000364306 107 ntBASIC3.89□□□□□ -1.79
TOP3BO95985 RNU6-767P-201ENST00000384132 107 ntBASIC3.89□□□□□ -1.79
TOP3BO95985 SNORA70E-201ENST00000384492 135 ntBASIC3.89□□□□□ -1.79
TOP3BO95985 MIR153-1-201ENST00000384914 90 ntBASIC3.89□□□□□ -1.79
TOP3BO95985 RPL23AP32-201ENST00000395315 459 ntBASIC3.89□□□□□ -1.79
TOP3BO95985 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
TOP3BO95985 MRPL42P2-201ENST00000403169 426 ntBASIC3.89□□□□□ -1.79
TOP3BO95985 OR9R1P-201ENST00000412200 877 ntBASIC3.89□□□□□ -1.79
TOP3BO95985 RPS12P23-201ENST00000419579 400 ntBASIC3.89□□□□□ -1.79
TOP3BO95985 AL035423.1-201ENST00000420331 213 ntBASIC3.89□□□□□ -1.79
TOP3BO95985 AC236972.1-201ENST00000433225 199 ntBASIC3.89□□□□□ -1.79
TOP3BO95985 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
TOP3BO95985 SEPT14P3-201ENST00000439401 183 ntBASIC3.89□□□□□ -1.79
TOP3BO95985 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.89□□□□□ -1.79
TOP3BO95985 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.89□□□□□ -1.79
TOP3BO95985 AL732372.2-207ENST00000445840 183 ntBASIC3.89□□□□□ -1.79
TOP3BO95985 SEPT14P2-201ENST00000453405 183 ntBASIC3.89□□□□□ -1.79
TOP3BO95985 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.89□□□□□ -1.79
TOP3BO95985 RPL21P103-201ENST00000479921 488 ntBASIC3.89□□□□□ -1.79
TOP3BO95985 RN7SL271P-201ENST00000487601 295 ntBASIC3.89□□□□□ -1.79
TOP3BO95985 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.89□□□□□ -1.79
TOP3BO95985 HMGN1P13-201ENST00000505795 138 ntBASIC3.89□□□□□ -1.79
TOP3BO95985 AC117522.3-201ENST00000507974 584 ntBASIC3.89□□□□□ -1.79
TOP3BO95985 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC3.89□□□□□ -1.79
TOP3BO95985 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC3.89□□□□□ -1.79
TOP3BO95985 FTH1P9-201ENST00000513251 355 ntBASIC3.89□□□□□ -1.79
TOP3BO95985 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.89□□□□□ -1.79
TOP3BO95985 SEPT14P4-201ENST00000513445 186 ntBASIC3.89□□□□□ -1.79
TOP3BO95985 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC3.89□□□□□ -1.79
TOP3BO95985 AC087369.1-201ENST00000520775 996 ntBASIC3.89□□□□□ -1.79
TOP3BO95985 FO082796.1-201ENST00000523795 183 ntBASIC3.89□□□□□ -1.79
TOP3BO95985 CYCSP30-201ENST00000546447 172 ntBASIC3.89□□□□□ -1.79
TOP3BO95985 AL442663.2-201ENST00000554385 511 ntBASIC3.89□□□□□ -1.79
TOP3BO95985 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC3.89□□□□□ -1.79
TOP3BO95985 AC090877.1-201ENST00000561418 344 ntBASIC3.89□□□□□ -1.79
TOP3BO95985 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.89□□□□□ -1.79
TOP3BO95985 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC3.89□□□□□ -1.79
TOP3BO95985 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.89□□□□□ -1.79
TOP3BO95985 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC3.89□□□□□ -1.79
TOP3BO95985 AC011712.1-201ENST00000588959 234 ntBASIC3.89□□□□□ -1.79
TOP3BO95985 AC011468.4-201ENST00000603942 409 ntBASIC3.89□□□□□ -1.79
TOP3BO95985 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.89□□□□□ -1.79
TOP3BO95985 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.89□□□□□ -1.79
TOP3BO95985 AC010149.2-201ENST00000637608 315 ntBASIC3.89□□□□□ -1.79
TOP3BO95985 NMD3P1-201ENST00000439704 1488 ntBASIC3.89□□□□□ -1.79
TOP3BO95985 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.89□□□□□ -1.79
TOP3BO95985 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
TOP3BO95985 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
TOP3BO95985 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.89□□□□□ -1.79
TOP3BO95985 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.89□□□□□ -1.79
TOP3BO95985 AL359893.1-201ENST00000447628 1580 ntBASIC3.89□□□□□ -1.79
TOP3BO95985 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
TOP3BO95985 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
TOP3BO95985 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.88□□□□□ -1.79
TOP3BO95985 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.88□□□□□ -1.79
TOP3BO95985 AC092447.10-201ENST00000620607 1652 ntBASIC3.88□□□□□ -1.79
TOP3BO95985 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
TOP3BO95985 SNORA60-201ENST00000362396 134 ntBASIC3.88□□□□□ -1.79
TOP3BO95985 RNU6-845P-201ENST00000362578 103 ntBASIC3.88□□□□□ -1.79
TOP3BO95985 SNORA63-201ENST00000363450 132 ntBASIC3.88□□□□□ -1.79
TOP3BO95985 Y_RNA.381-201ENST00000365666 102 ntBASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 124.4 ms