Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PTCD1O75127 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PTCD1O75127 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PTCD1O75127 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
PTCD1O75127 AC107068.1-201ENST00000563286 4218 ntBASIC5.69□□□□□ -1.5
PTCD1O75127 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
PTCD1O75127 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
PTCD1O75127 RNU6-562P-201ENST00000362731 107 ntBASIC5.69□□□□□ -1.5
PTCD1O75127 RNU6-238P-201ENST00000363313 106 ntBASIC5.69□□□□□ -1.5
PTCD1O75127 Y_RNA.153-201ENST00000363615 91 ntBASIC5.69□□□□□ -1.5
PTCD1O75127 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
PTCD1O75127 AC117470.1-201ENST00000381974 330 ntBASIC5.69□□□□□ -1.5
PTCD1O75127 Y_RNA.512-201ENST00000384518 102 ntBASIC5.69□□□□□ -1.5
PTCD1O75127 Y_RNA.646-201ENST00000410980 101 ntBASIC5.69□□□□□ -1.5
PTCD1O75127 AC096644.2-201ENST00000429278 159 ntBASIC5.69□□□□□ -1.5
PTCD1O75127 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC5.69□□□□□ -1.5
PTCD1O75127 AL035666.1-201ENST00000446195 348 ntBASIC5.69□□□□□ -1.5
PTCD1O75127 HMGB3P21-201ENST00000452483 547 ntBASIC5.69□□□□□ -1.5
PTCD1O75127 AC002553.2-201ENST00000453217 340 ntBASIC5.69□□□□□ -1.5
PTCD1O75127 AC104472.2-201ENST00000469035 601 ntBASIC5.69□□□□□ -1.5
PTCD1O75127 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC5.69□□□□□ -1.5
PTCD1O75127 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.69□□□□□ -1.5
PTCD1O75127 RNU6-635P-201ENST00000516651 102 ntBASIC5.69□□□□□ -1.5
PTCD1O75127 AC009812.2-201ENST00000517657 457 ntBASIC5.69□□□□□ -1.5
PTCD1O75127 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC5.69□□□□□ -1.5
PTCD1O75127 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.69□□□□□ -1.5
PTCD1O75127 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC5.69□□□□□ -1.5
PTCD1O75127 RN7SL600P-201ENST00000581811 299 ntBASIC5.69□□□□□ -1.5
PTCD1O75127 MIR3941-201ENST00000582572 103 ntBASIC5.69□□□□□ -1.5
PTCD1O75127 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC5.69□□□□□ -1.5
PTCD1O75127 BPIFA4P-203ENST00000603168 689 ntBASIC5.69□□□□□ -1.5
PTCD1O75127 ATP5A1P2-202ENST00000616464 443 ntBASIC5.69□□□□□ -1.5
PTCD1O75127 AC015914.2-201ENST00000618167 288 ntBASIC5.69□□□□□ -1.5
PTCD1O75127 MIR8059-201ENST00000620427 81 ntBASIC5.69□□□□□ -1.5
PTCD1O75127 AC243312.2-201ENST00000623340 601 ntBASIC5.69□□□□□ -1.5
PTCD1O75127 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
PTCD1O75127 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
PTCD1O75127 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC5.69□□□□□ -1.5
PTCD1O75127 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC5.69□□□□□ -1.5
PTCD1O75127 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
PTCD1O75127 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
PTCD1O75127 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
PTCD1O75127 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.68□□□□□ -1.5
PTCD1O75127 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PTCD1O75127 AC116667.1-201ENST00000604855 2072 ntBASIC5.68□□□□□ -1.5
PTCD1O75127 AC139769.1-204ENST00000472297 1931 ntBASIC5.68□□□□□ -1.5
PTCD1O75127 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PTCD1O75127 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PTCD1O75127 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC5.68□□□□□ -1.5
PTCD1O75127 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
PTCD1O75127 RNU6-393P-201ENST00000384475 107 ntBASIC5.68□□□□□ -1.5
PTCD1O75127 MIR135A2-201ENST00000384854 100 ntBASIC5.68□□□□□ -1.5
PTCD1O75127 SNORA16.2-201ENST00000390991 127 ntBASIC5.68□□□□□ -1.5
PTCD1O75127 AL139039.1-201ENST00000401900 692 ntBASIC5.68□□□□□ -1.5
PTCD1O75127 MTCO2P33-201ENST00000402100 465 ntBASIC5.68□□□□□ -1.5
PTCD1O75127 AL391417.1-201ENST00000404100 426 ntBASIC5.68□□□□□ -1.5
PTCD1O75127 AL445189.1-201ENST00000405722 338 ntBASIC5.68□□□□□ -1.5
PTCD1O75127 RNU6-628P-201ENST00000410675 107 ntBASIC5.68□□□□□ -1.5
PTCD1O75127 SDAD1P3-201ENST00000427380 333 ntBASIC5.68□□□□□ -1.5
PTCD1O75127 VTI1BP4-201ENST00000427516 527 ntBASIC5.68□□□□□ -1.5
PTCD1O75127 ARL5AP4-201ENST00000430731 512 ntBASIC5.68□□□□□ -1.5
PTCD1O75127 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC5.68□□□□□ -1.5
PTCD1O75127 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC5.68□□□□□ -1.5
PTCD1O75127 RN7SL691P-201ENST00000494487 301 ntBASIC5.68□□□□□ -1.5
PTCD1O75127 AP001086.1-201ENST00000494882 321 ntBASIC5.68□□□□□ -1.5
PTCD1O75127 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC5.68□□□□□ -1.5
PTCD1O75127 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC5.68□□□□□ -1.5
PTCD1O75127 AC110794.1-201ENST00000505816 425 ntBASIC5.68□□□□□ -1.5
PTCD1O75127 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC5.68□□□□□ -1.5
PTCD1O75127 RNU6-976P-201ENST00000516086 111 ntBASIC5.68□□□□□ -1.5
PTCD1O75127 RNA5SP49-201ENST00000516450 115 ntBASIC5.68□□□□□ -1.5
PTCD1O75127 AC009902.1-201ENST00000519351 183 ntBASIC5.68□□□□□ -1.5
PTCD1O75127 DYNLL1P4-201ENST00000549314 266 ntBASIC5.68□□□□□ -1.5
PTCD1O75127 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC5.68□□□□□ -1.5
PTCD1O75127 AC090115.3-201ENST00000553218 849 ntBASIC5.68□□□□□ -1.5
PTCD1O75127 AL359219.2-201ENST00000555184 348 ntBASIC5.68□□□□□ -1.5
PTCD1O75127 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC5.68□□□□□ -1.5
PTCD1O75127 AC006130.2-201ENST00000586202 326 ntBASIC5.68□□□□□ -1.5
PTCD1O75127 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC5.68□□□□□ -1.5
PTCD1O75127 MIR6867-201ENST00000610636 67 ntBASIC5.68□□□□□ -1.5
PTCD1O75127 AC007998.5-201ENST00000622938 237 ntBASIC5.68□□□□□ -1.5
PTCD1O75127 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC5.68□□□□□ -1.5
PTCD1O75127 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
PTCD1O75127 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
PTCD1O75127 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PTCD1O75127 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.68□□□□□ -1.5
PTCD1O75127 AL022322.2-201ENST00000624072 20397 ntBASIC5.68□□□□□ -1.5
PTCD1O75127 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
PTCD1O75127 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC5.67□□□□□ -1.5
PTCD1O75127 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
PTCD1O75127 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
PTCD1O75127 AL672167.1-204ENST00000641875 3017 ntBASIC5.67□□□□□ -1.5
PTCD1O75127 AC107027.3-201ENST00000565095 3473 ntBASIC5.67□□□□□ -1.5
PTCD1O75127 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PTCD1O75127 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PTCD1O75127 RNU6-1115P-201ENST00000362490 106 ntBASIC5.67□□□□□ -1.5
PTCD1O75127 CRP-202ENST00000368110 667 ntTSL 3 BASIC5.67□□□□□ -1.5
PTCD1O75127 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PTCD1O75127 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
PTCD1O75127 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms