Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.99□□□□□ -1.77
PROM1O43490 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
PROM1O43490 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
PROM1O43490 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
PROM1O43490 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.98□□□□□ -1.77
PROM1O43490 USP8P1-201ENST00000494673 3183 ntBASIC3.98□□□□□ -1.77
PROM1O43490 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.98□□□□□ -1.77
PROM1O43490 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.98□□□□□ -1.77
PROM1O43490 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
PROM1O43490 AC244517.1-201ENST00000606030 2086 ntBASIC3.98□□□□□ -1.77
PROM1O43490 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
PROM1O43490 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.98□□□□□ -1.77
PROM1O43490 HSPE1P11-201ENST00000339579 310 ntBASIC3.98□□□□□ -1.77
PROM1O43490 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
PROM1O43490 Y_RNA.67-201ENST00000362870 100 ntBASIC3.98□□□□□ -1.77
PROM1O43490 RNU6-432P-201ENST00000384196 109 ntBASIC3.98□□□□□ -1.77
PROM1O43490 TXNP7-201ENST00000406296 293 ntBASIC3.98□□□□□ -1.77
PROM1O43490 RNU2-39P-201ENST00000410604 198 ntBASIC3.98□□□□□ -1.77
PROM1O43490 Y_RNA.615-201ENST00000410769 117 ntBASIC3.98□□□□□ -1.77
PROM1O43490 MTCO3P46-201ENST00000425787 232 ntBASIC3.98□□□□□ -1.77
PROM1O43490 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.98□□□□□ -1.77
PROM1O43490 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
PROM1O43490 RPL23AP89-201ENST00000439324 255 ntBASIC3.98□□□□□ -1.77
PROM1O43490 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC3.98□□□□□ -1.77
PROM1O43490 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.98□□□□□ -1.77
PROM1O43490 RNU7-182P-201ENST00000459009 62 ntBASIC3.98□□□□□ -1.77
PROM1O43490 MRPS17P3-201ENST00000465453 385 ntBASIC3.98□□□□□ -1.77
PROM1O43490 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.98□□□□□ -1.77
PROM1O43490 AC126389.1-201ENST00000477436 290 ntBASIC3.98□□□□□ -1.77
PROM1O43490 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.98□□□□□ -1.77
PROM1O43490 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.98□□□□□ -1.77
PROM1O43490 RNU4ATAC8P-201ENST00000516196 109 ntBASIC3.98□□□□□ -1.77
PROM1O43490 RNU6-1314P-201ENST00000517139 104 ntBASIC3.98□□□□□ -1.77
PROM1O43490 TRAPPC2P2-201ENST00000517589 409 ntBASIC3.98□□□□□ -1.77
PROM1O43490 FAM60DP-201ENST00000524174 632 ntBASIC3.98□□□□□ -1.77
PROM1O43490 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.98□□□□□ -1.77
PROM1O43490 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.98□□□□□ -1.77
PROM1O43490 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
PROM1O43490 AC025884.1-201ENST00000556034 378 ntBASIC3.98□□□□□ -1.77
PROM1O43490 TVP23BP1-201ENST00000557500 617 ntBASIC3.98□□□□□ -1.77
PROM1O43490 AL360157.1-201ENST00000565962 87 ntBASIC3.98□□□□□ -1.77
PROM1O43490 AL355375.2-201ENST00000574825 175 ntBASIC3.98□□□□□ -1.77
PROM1O43490 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.98□□□□□ -1.77
PROM1O43490 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.98□□□□□ -1.77
PROM1O43490 AL161729.3-201ENST00000603533 673 ntBASIC3.98□□□□□ -1.77
PROM1O43490 AC245389.1-201ENST00000605141 529 ntBASIC3.98□□□□□ -1.77
PROM1O43490 AL050343.2-201ENST00000607338 280 ntBASIC3.98□□□□□ -1.77
PROM1O43490 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.98□□□□□ -1.77
PROM1O43490 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
PROM1O43490 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
PROM1O43490 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
PROM1O43490 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
PROM1O43490 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
PROM1O43490 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
PROM1O43490 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
PROM1O43490 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.97□□□□□ -1.77
PROM1O43490 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
PROM1O43490 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC3.97□□□□□ -1.77
PROM1O43490 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
PROM1O43490 SYF2-202ENST00000354361 926 ntTSL 2 BASIC3.97□□□□□ -1.77
PROM1O43490 Y_RNA.231-201ENST00000364358 102 ntBASIC3.97□□□□□ -1.77
PROM1O43490 RNU4-66P-201ENST00000365199 138 ntBASIC3.97□□□□□ -1.77
PROM1O43490 RNU6-837P-201ENST00000391056 108 ntBASIC3.97□□□□□ -1.77
PROM1O43490 AL136372.1-201ENST00000403060 228 ntBASIC3.97□□□□□ -1.77
PROM1O43490 AL606923.1-201ENST00000406616 190 ntBASIC3.97□□□□□ -1.77
PROM1O43490 RPL23AP26-201ENST00000412728 464 ntBASIC3.97□□□□□ -1.77
PROM1O43490 MTND3P8-201ENST00000412909 339 ntBASIC3.97□□□□□ -1.77
PROM1O43490 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC3.97□□□□□ -1.77
PROM1O43490 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.97□□□□□ -1.77
PROM1O43490 NDUFB4P5-201ENST00000415445 361 ntBASIC3.97□□□□□ -1.77
PROM1O43490 OR2AS1P-201ENST00000427827 319 ntBASIC3.97□□□□□ -1.77
PROM1O43490 SRIP2-201ENST00000428470 166 ntBASIC3.97□□□□□ -1.77
PROM1O43490 ERLEC1P1-201ENST00000433806 578 ntBASIC3.97□□□□□ -1.77
PROM1O43490 IFNA20P-201ENST00000436840 528 ntBASIC3.97□□□□□ -1.77
PROM1O43490 RPL7P28-201ENST00000437739 740 ntBASIC3.97□□□□□ -1.77
PROM1O43490 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.97□□□□□ -1.77
PROM1O43490 MTND1P18-201ENST00000448191 573 ntBASIC3.97□□□□□ -1.77
PROM1O43490 snoU13.3-201ENST00000459441 104 ntBASIC3.97□□□□□ -1.77
PROM1O43490 AC007547.1-201ENST00000462177 490 ntBASIC3.97□□□□□ -1.77
PROM1O43490 HMGN2P26-201ENST00000463169 339 ntBASIC3.97□□□□□ -1.77
PROM1O43490 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.97□□□□□ -1.77
PROM1O43490 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
PROM1O43490 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC3.97□□□□□ -1.77
PROM1O43490 AC112206.3-201ENST00000514578 389 ntBASIC3.97□□□□□ -1.77
PROM1O43490 RNU6-64P-201ENST00000517119 105 ntBASIC3.97□□□□□ -1.77
PROM1O43490 NARSP2-201ENST00000518524 679 ntBASIC3.97□□□□□ -1.77
PROM1O43490 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.97□□□□□ -1.77
PROM1O43490 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.97□□□□□ -1.77
PROM1O43490 AP003385.6-201ENST00000531603 374 ntBASIC3.97□□□□□ -1.77
PROM1O43490 HPRT1P3-201ENST00000539521 576 ntBASIC3.97□□□□□ -1.77
PROM1O43490 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC3.97□□□□□ -1.77
PROM1O43490 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC3.97□□□□□ -1.77
PROM1O43490 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.97□□□□□ -1.77
PROM1O43490 AC063950.1-201ENST00000552036 308 ntBASIC3.97□□□□□ -1.77
PROM1O43490 SETP7-201ENST00000552169 453 ntBASIC3.97□□□□□ -1.77
PROM1O43490 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC3.97□□□□□ -1.77
PROM1O43490 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC3.97□□□□□ -1.77
PROM1O43490 AL031176.1-201ENST00000604554 466 ntBASIC3.97□□□□□ -1.77
PROM1O43490 AC064801.1-201ENST00000612025 407 ntBASIC3.97□□□□□ -1.77
PROM1O43490 MIR3653-201ENST00000625572 110 ntBASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms