Protein–RNA interactions for Protein: Q9Y5I7

CLDN16, Claudin-16, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN16Q9Y5I7 ISCA1P1-201ENST00000426679 387 ntBASIC3.54□□□□□ -1.84
CLDN16Q9Y5I7 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC3.54□□□□□ -1.84
CLDN16Q9Y5I7 ARF4P2-201ENST00000430209 526 ntBASIC3.54□□□□□ -1.84
CLDN16Q9Y5I7 RPL23AP30-201ENST00000432419 501 ntBASIC3.54□□□□□ -1.84
CLDN16Q9Y5I7 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.54□□□□□ -1.84
CLDN16Q9Y5I7 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.54□□□□□ -1.84
CLDN16Q9Y5I7 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CLDN16Q9Y5I7 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC3.54□□□□□ -1.84
CLDN16Q9Y5I7 SNORD97-201ENST00000459187 142 ntBASIC3.54□□□□□ -1.84
CLDN16Q9Y5I7 RN7SL542P-201ENST00000467147 294 ntBASIC3.54□□□□□ -1.84
CLDN16Q9Y5I7 RN7SL132P-201ENST00000478131 296 ntBASIC3.54□□□□□ -1.84
CLDN16Q9Y5I7 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC3.54□□□□□ -1.84
CLDN16Q9Y5I7 SNORA31.8-201ENST00000516327 108 ntBASIC3.54□□□□□ -1.84
CLDN16Q9Y5I7 SCARNA24.1-201ENST00000516465 137 ntBASIC3.54□□□□□ -1.84
CLDN16Q9Y5I7 RNU6-410P-201ENST00000517006 107 ntBASIC3.54□□□□□ -1.84
CLDN16Q9Y5I7 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.54□□□□□ -1.84
CLDN16Q9Y5I7 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.54□□□□□ -1.84
CLDN16Q9Y5I7 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC3.54□□□□□ -1.84
CLDN16Q9Y5I7 GLUD1P4-201ENST00000590914 418 ntBASIC3.54□□□□□ -1.84
CLDN16Q9Y5I7 AC006116.10-201ENST00000591836 581 ntBASIC3.54□□□□□ -1.84
CLDN16Q9Y5I7 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.54□□□□□ -1.84
CLDN16Q9Y5I7 AC012507.3-201ENST00000603556 477 ntBASIC3.54□□□□□ -1.84
CLDN16Q9Y5I7 AC126118.1-201ENST00000607744 628 ntBASIC3.54□□□□□ -1.84
CLDN16Q9Y5I7 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.54□□□□□ -1.84
CLDN16Q9Y5I7 AP002826.1-201ENST00000608835 315 ntBASIC3.54□□□□□ -1.84
CLDN16Q9Y5I7 AL121772.2-201ENST00000614331 297 ntBASIC3.54□□□□□ -1.84
CLDN16Q9Y5I7 SDR42E1P2-201ENST00000614861 481 ntBASIC3.54□□□□□ -1.84
CLDN16Q9Y5I7 AC010133.1-201ENST00000615809 842 ntBASIC3.54□□□□□ -1.84
CLDN16Q9Y5I7 SRP54-214ENST00000630962 162 ntTSL 5 BASIC3.54□□□□□ -1.84
CLDN16Q9Y5I7 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CLDN16Q9Y5I7 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CLDN16Q9Y5I7 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.54□□□□□ -1.84
CLDN16Q9Y5I7 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
CLDN16Q9Y5I7 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
CLDN16Q9Y5I7 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.54□□□□□ -1.84
CLDN16Q9Y5I7 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CLDN16Q9Y5I7 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CLDN16Q9Y5I7 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.53□□□□□ -1.84
CLDN16Q9Y5I7 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CLDN16Q9Y5I7 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CLDN16Q9Y5I7 DEFB108F-201ENST00000344638 222 ntBASIC3.53□□□□□ -1.84
CLDN16Q9Y5I7 RNU6-511P-201ENST00000363496 107 ntBASIC3.53□□□□□ -1.84
CLDN16Q9Y5I7 RNU6-1284P-201ENST00000363701 100 ntBASIC3.53□□□□□ -1.84
CLDN16Q9Y5I7 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CLDN16Q9Y5I7 Y_RNA.409-201ENST00000383990 98 ntBASIC3.53□□□□□ -1.84
CLDN16Q9Y5I7 RNU6-641P-201ENST00000384006 107 ntBASIC3.53□□□□□ -1.84
CLDN16Q9Y5I7 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
CLDN16Q9Y5I7 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.53□□□□□ -1.84
CLDN16Q9Y5I7 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC3.53□□□□□ -1.84
CLDN16Q9Y5I7 AC069157.1-201ENST00000421749 137 ntBASIC3.53□□□□□ -1.84
CLDN16Q9Y5I7 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC3.53□□□□□ -1.84
CLDN16Q9Y5I7 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.53□□□□□ -1.84
CLDN16Q9Y5I7 MTND3P21-201ENST00000433774 331 ntBASIC3.53□□□□□ -1.84
CLDN16Q9Y5I7 SNRPEP4-201ENST00000435815 279 ntBASIC3.53□□□□□ -1.84
CLDN16Q9Y5I7 MTATP6P13-201ENST00000438531 667 ntBASIC3.53□□□□□ -1.84
CLDN16Q9Y5I7 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC3.53□□□□□ -1.84
CLDN16Q9Y5I7 AC079781.2-201ENST00000446424 169 ntBASIC3.53□□□□□ -1.84
CLDN16Q9Y5I7 AC093392.2-201ENST00000450682 337 ntBASIC3.53□□□□□ -1.84
CLDN16Q9Y5I7 AC093899.1-201ENST00000457984 376 ntBASIC3.53□□□□□ -1.84
CLDN16Q9Y5I7 RN7SL330P-201ENST00000469709 307 ntBASIC3.53□□□□□ -1.84
CLDN16Q9Y5I7 HSPE1P6-201ENST00000479457 291 ntBASIC3.53□□□□□ -1.84
CLDN16Q9Y5I7 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC3.53□□□□□ -1.84
CLDN16Q9Y5I7 AL049874.1-201ENST00000489560 388 ntBASIC3.53□□□□□ -1.84
CLDN16Q9Y5I7 SAP18P1-201ENST00000512058 390 ntBASIC3.53□□□□□ -1.84
CLDN16Q9Y5I7 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC3.53□□□□□ -1.84
CLDN16Q9Y5I7 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.53□□□□□ -1.84
CLDN16Q9Y5I7 AC100870.1-201ENST00000522035 505 ntBASIC3.53□□□□□ -1.84
CLDN16Q9Y5I7 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC3.53□□□□□ -1.84
CLDN16Q9Y5I7 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC3.53□□□□□ -1.84
CLDN16Q9Y5I7 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.53□□□□□ -1.84
CLDN16Q9Y5I7 AC027807.1-201ENST00000559921 996 ntBASIC3.53□□□□□ -1.84
CLDN16Q9Y5I7 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.53□□□□□ -1.84
CLDN16Q9Y5I7 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.53□□□□□ -1.84
CLDN16Q9Y5I7 AC034105.4-201ENST00000568304 277 ntBASIC3.53□□□□□ -1.84
CLDN16Q9Y5I7 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.53□□□□□ -1.84
CLDN16Q9Y5I7 MIR5047-201ENST00000579212 100 ntBASIC3.53□□□□□ -1.84
CLDN16Q9Y5I7 MIR5187-201ENST00000583479 76 ntBASIC3.53□□□□□ -1.84
CLDN16Q9Y5I7 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.53□□□□□ -1.84
CLDN16Q9Y5I7 AP003465.2-201ENST00000602571 373 ntBASIC3.53□□□□□ -1.84
CLDN16Q9Y5I7 SNORA51-201ENST00000606420 132 ntBASIC3.53□□□□□ -1.84
CLDN16Q9Y5I7 AC008536.2-201ENST00000607284 349 ntBASIC3.53□□□□□ -1.84
CLDN16Q9Y5I7 AC005344.1-201ENST00000613391 459 ntBASIC3.53□□□□□ -1.84
CLDN16Q9Y5I7 U4.5-201ENST00000617137 123 ntBASIC3.53□□□□□ -1.84
CLDN16Q9Y5I7 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.53□□□□□ -1.84
CLDN16Q9Y5I7 AL157786.1-207ENST00000627771 695 ntBASIC3.53□□□□□ -1.84
CLDN16Q9Y5I7 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.53□□□□□ -1.84
CLDN16Q9Y5I7 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CLDN16Q9Y5I7 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.53□□□□□ -1.84
CLDN16Q9Y5I7 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CLDN16Q9Y5I7 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CLDN16Q9Y5I7 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC3.53□□□□□ -1.84
CLDN16Q9Y5I7 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.85
CLDN16Q9Y5I7 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CLDN16Q9Y5I7 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
CLDN16Q9Y5I7 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.52□□□□□ -1.85
CLDN16Q9Y5I7 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CLDN16Q9Y5I7 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CLDN16Q9Y5I7 HSPE1P11-201ENST00000339579 310 ntBASIC3.52□□□□□ -1.85
CLDN16Q9Y5I7 RNU6-1097P-201ENST00000363586 107 ntBASIC3.52□□□□□ -1.85
CLDN16Q9Y5I7 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 149.6 ms