Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC5.27□□□□□ -1.57
PCDHGA11Q9Y5H2 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.27□□□□□ -1.57
PCDHGA11Q9Y5H2 AL627311.1-201ENST00000431514 115 ntBASIC5.27□□□□□ -1.57
PCDHGA11Q9Y5H2 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC5.27□□□□□ -1.57
PCDHGA11Q9Y5H2 EEF1B2P6-201ENST00000445713 673 ntBASIC5.27□□□□□ -1.57
PCDHGA11Q9Y5H2 AC007998.1-201ENST00000474156 672 ntBASIC5.27□□□□□ -1.57
PCDHGA11Q9Y5H2 RPL23AP45-201ENST00000476406 468 ntBASIC5.27□□□□□ -1.57
PCDHGA11Q9Y5H2 AC098869.1-201ENST00000481627 292 ntBASIC5.27□□□□□ -1.57
PCDHGA11Q9Y5H2 AK3P2-201ENST00000507976 429 ntBASIC5.27□□□□□ -1.57
PCDHGA11Q9Y5H2 AC067942.3-201ENST00000512025 362 ntBASIC5.27□□□□□ -1.57
PCDHGA11Q9Y5H2 RNU4-71P-201ENST00000516258 113 ntBASIC5.27□□□□□ -1.57
PCDHGA11Q9Y5H2 AC107918.3-201ENST00000533272 382 ntBASIC5.27□□□□□ -1.57
PCDHGA11Q9Y5H2 AC022080.3-201ENST00000544433 482 ntBASIC5.27□□□□□ -1.57
PCDHGA11Q9Y5H2 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.27□□□□□ -1.57
PCDHGA11Q9Y5H2 FAM60BP-201ENST00000578364 658 ntBASIC5.27□□□□□ -1.57
PCDHGA11Q9Y5H2 MIR4472-2-201ENST00000582069 67 ntBASIC5.27□□□□□ -1.57
PCDHGA11Q9Y5H2 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.27□□□□□ -1.57
PCDHGA11Q9Y5H2 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.27□□□□□ -1.57
PCDHGA11Q9Y5H2 AC006557.5-201ENST00000603126 811 ntBASIC5.27□□□□□ -1.57
PCDHGA11Q9Y5H2 AC105254.2-201ENST00000603636 436 ntBASIC5.27□□□□□ -1.57
PCDHGA11Q9Y5H2 AL645944.1-201ENST00000603857 493 ntBASIC5.27□□□□□ -1.57
PCDHGA11Q9Y5H2 AC009318.2-201ENST00000610917 651 ntBASIC5.27□□□□□ -1.57
PCDHGA11Q9Y5H2 CCL14-204ENST00000622526 472 ntTSL 3 BASIC5.27□□□□□ -1.57
PCDHGA11Q9Y5H2 CU639417.4-201ENST00000623928 207 ntBASIC5.27□□□□□ -1.57
PCDHGA11Q9Y5H2 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC5.27□□□□□ -1.57
PCDHGA11Q9Y5H2 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.27□□□□□ -1.57
PCDHGA11Q9Y5H2 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PCDHGA11Q9Y5H2 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PCDHGA11Q9Y5H2 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PCDHGA11Q9Y5H2 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
PCDHGA11Q9Y5H2 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PCDHGA11Q9Y5H2 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PCDHGA11Q9Y5H2 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC5.27□□□□□ -1.57
PCDHGA11Q9Y5H2 AC100757.1-201ENST00000616872 1835 ntBASIC5.27□□□□□ -1.57
PCDHGA11Q9Y5H2 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PCDHGA11Q9Y5H2 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PCDHGA11Q9Y5H2 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.27□□□□□ -1.57
PCDHGA11Q9Y5H2 OR4G2P-202ENST00000641004 1759 ntBASIC5.27□□□□□ -1.57
PCDHGA11Q9Y5H2 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.26□□□□□ -1.57
PCDHGA11Q9Y5H2 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.26□□□□□ -1.57
PCDHGA11Q9Y5H2 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
PCDHGA11Q9Y5H2 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
PCDHGA11Q9Y5H2 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
PCDHGA11Q9Y5H2 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.26□□□□□ -1.57
PCDHGA11Q9Y5H2 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.26□□□□□ -1.57
PCDHGA11Q9Y5H2 Y_RNA.237-201ENST00000364439 102 ntBASIC5.26□□□□□ -1.57
PCDHGA11Q9Y5H2 RNA5SP510-201ENST00000364697 99 ntBASIC5.26□□□□□ -1.57
PCDHGA11Q9Y5H2 RNU6-708P-201ENST00000384217 107 ntBASIC5.26□□□□□ -1.57
PCDHGA11Q9Y5H2 AL022722.2-201ENST00000402519 180 ntBASIC5.26□□□□□ -1.57
PCDHGA11Q9Y5H2 AL592148.1-201ENST00000413568 445 ntBASIC5.26□□□□□ -1.57
PCDHGA11Q9Y5H2 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC5.26□□□□□ -1.57
PCDHGA11Q9Y5H2 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC5.26□□□□□ -1.57
PCDHGA11Q9Y5H2 AL591043.1-201ENST00000432461 424 ntBASIC5.26□□□□□ -1.57
PCDHGA11Q9Y5H2 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PCDHGA11Q9Y5H2 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.26□□□□□ -1.57
PCDHGA11Q9Y5H2 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.26□□□□□ -1.57
PCDHGA11Q9Y5H2 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC5.26□□□□□ -1.57
PCDHGA11Q9Y5H2 AL356981.1-201ENST00000454879 684 ntBASIC5.26□□□□□ -1.57
PCDHGA11Q9Y5H2 AL139109.1-201ENST00000455491 297 ntBASIC5.26□□□□□ -1.57
PCDHGA11Q9Y5H2 AC087190.1-201ENST00000484462 480 ntBASIC5.26□□□□□ -1.57
PCDHGA11Q9Y5H2 AC107032.1-201ENST00000485945 480 ntBASIC5.26□□□□□ -1.57
PCDHGA11Q9Y5H2 AC104164.2-201ENST00000496953 495 ntBASIC5.26□□□□□ -1.57
PCDHGA11Q9Y5H2 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC5.26□□□□□ -1.57
PCDHGA11Q9Y5H2 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.26□□□□□ -1.57
PCDHGA11Q9Y5H2 MIR2355-201ENST00000517199 87 ntBASIC5.26□□□□□ -1.57
PCDHGA11Q9Y5H2 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PCDHGA11Q9Y5H2 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC5.26□□□□□ -1.57
PCDHGA11Q9Y5H2 AC093023.1-201ENST00000547375 507 ntBASIC5.26□□□□□ -1.57
PCDHGA11Q9Y5H2 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC5.26□□□□□ -1.57
PCDHGA11Q9Y5H2 AL442163.3-201ENST00000554110 156 ntBASIC5.26□□□□□ -1.57
PCDHGA11Q9Y5H2 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC5.26□□□□□ -1.57
PCDHGA11Q9Y5H2 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC5.26□□□□□ -1.57
PCDHGA11Q9Y5H2 AP005403.1-201ENST00000579720 229 ntBASIC5.26□□□□□ -1.57
PCDHGA11Q9Y5H2 MIR3936-201ENST00000584304 110 ntBASIC5.26□□□□□ -1.57
PCDHGA11Q9Y5H2 AC008121.1-201ENST00000603244 268 ntBASIC5.26□□□□□ -1.57
PCDHGA11Q9Y5H2 MIR6778-201ENST00000617912 73 ntBASIC5.26□□□□□ -1.57
PCDHGA11Q9Y5H2 FTX_2.1-201ENST00000618816 94 ntBASIC5.26□□□□□ -1.57
PCDHGA11Q9Y5H2 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC5.26□□□□□ -1.57
PCDHGA11Q9Y5H2 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
PCDHGA11Q9Y5H2 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PCDHGA11Q9Y5H2 ADAM5-202ENST00000399789 1942 ntBASIC5.26□□□□□ -1.57
PCDHGA11Q9Y5H2 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PCDHGA11Q9Y5H2 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PCDHGA11Q9Y5H2 AL592437.2-201ENST00000421655 2434 ntBASIC5.26□□□□□ -1.57
PCDHGA11Q9Y5H2 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.26□□□□□ -1.57
PCDHGA11Q9Y5H2 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.26□□□□□ -1.57
PCDHGA11Q9Y5H2 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
PCDHGA11Q9Y5H2 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
PCDHGA11Q9Y5H2 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
PCDHGA11Q9Y5H2 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
PCDHGA11Q9Y5H2 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
PCDHGA11Q9Y5H2 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
PCDHGA11Q9Y5H2 SNORD81.1-201ENST00000363064 77 ntBASIC5.25□□□□□ -1.57
PCDHGA11Q9Y5H2 Y_RNA.462-201ENST00000384268 102 ntBASIC5.25□□□□□ -1.57
PCDHGA11Q9Y5H2 Y_RNA.539-201ENST00000384635 107 ntBASIC5.25□□□□□ -1.57
PCDHGA11Q9Y5H2 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
PCDHGA11Q9Y5H2 RNA5SP241-201ENST00000391326 114 ntBASIC5.25□□□□□ -1.57
PCDHGA11Q9Y5H2 MIR190B-201ENST00000401119 79 ntBASIC5.25□□□□□ -1.57
PCDHGA11Q9Y5H2 RN7SKP106-201ENST00000410832 272 ntBASIC5.25□□□□□ -1.57
PCDHGA11Q9Y5H2 Y_RNA.623-201ENST00000411128 95 ntBASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms