Protein–RNA interactions for Protein: Q9UJQ4

SALL4, Sal-like protein 4, humanhuman

Predictions only

Length 1,053 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL4Q9UJQ4 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
SALL4Q9UJQ4 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.14□□□□□ -1.59
SALL4Q9UJQ4 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC5.14□□□□□ -1.59
SALL4Q9UJQ4 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SALL4Q9UJQ4 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.14□□□□□ -1.59
SALL4Q9UJQ4 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SALL4Q9UJQ4 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SALL4Q9UJQ4 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
SALL4Q9UJQ4 Y_RNA.106-201ENST00000363189 100 ntBASIC5.14□□□□□ -1.59
SALL4Q9UJQ4 RNU6-1155P-201ENST00000363554 107 ntBASIC5.14□□□□□ -1.59
SALL4Q9UJQ4 RNU6-371P-201ENST00000364283 108 ntBASIC5.14□□□□□ -1.59
SALL4Q9UJQ4 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SALL4Q9UJQ4 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SALL4Q9UJQ4 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC5.14□□□□□ -1.59
SALL4Q9UJQ4 DDX39BP1-205ENST00000422507 192 ntBASIC5.14□□□□□ -1.59
SALL4Q9UJQ4 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC5.14□□□□□ -1.59
SALL4Q9UJQ4 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SALL4Q9UJQ4 AC133473.1-201ENST00000455173 299 ntBASIC5.14□□□□□ -1.59
SALL4Q9UJQ4 RN7SL558P-201ENST00000497468 299 ntBASIC5.14□□□□□ -1.59
SALL4Q9UJQ4 AC105758.1-201ENST00000506038 399 ntBASIC5.14□□□□□ -1.59
SALL4Q9UJQ4 RN7SKP46-201ENST00000515942 234 ntBASIC5.14□□□□□ -1.59
SALL4Q9UJQ4 Y_RNA.715-201ENST00000517082 110 ntBASIC5.14□□□□□ -1.59
SALL4Q9UJQ4 RNU6-840P-201ENST00000517275 65 ntBASIC5.14□□□□□ -1.59
SALL4Q9UJQ4 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC5.14□□□□□ -1.59
SALL4Q9UJQ4 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC5.14□□□□□ -1.59
SALL4Q9UJQ4 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.14□□□□□ -1.59
SALL4Q9UJQ4 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC5.14□□□□□ -1.59
SALL4Q9UJQ4 AL390726.5-202ENST00000564800 256 ntBASIC5.14□□□□□ -1.59
SALL4Q9UJQ4 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC5.14□□□□□ -1.59
SALL4Q9UJQ4 MIR3934-201ENST00000579806 107 ntBASIC5.14□□□□□ -1.59
SALL4Q9UJQ4 MIR4691-201ENST00000583764 85 ntBASIC5.14□□□□□ -1.59
SALL4Q9UJQ4 AC125232.2-201ENST00000592457 143 ntBASIC5.14□□□□□ -1.59
SALL4Q9UJQ4 RNU6-85P-201ENST00000605989 107 ntBASIC5.14□□□□□ -1.59
SALL4Q9UJQ4 MIR6748-201ENST00000610433 71 ntBASIC5.14□□□□□ -1.59
SALL4Q9UJQ4 AC100827.5-201ENST00000615883 426 ntBASIC5.14□□□□□ -1.59
SALL4Q9UJQ4 U73479.1-201ENST00000618062 168 ntBASIC5.14□□□□□ -1.59
SALL4Q9UJQ4 AC015967.1-201ENST00000619893 476 ntBASIC5.14□□□□□ -1.59
SALL4Q9UJQ4 AC005086.4-201ENST00000623065 213 ntBASIC5.14□□□□□ -1.59
SALL4Q9UJQ4 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
SALL4Q9UJQ4 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC5.14□□□□□ -1.59
SALL4Q9UJQ4 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC5.14□□□□□ -1.59
SALL4Q9UJQ4 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.14□□□□□ -1.59
SALL4Q9UJQ4 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SALL4Q9UJQ4 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SALL4Q9UJQ4 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SALL4Q9UJQ4 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.14□□□□□ -1.59
SALL4Q9UJQ4 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC5.14□□□□□ -1.59
SALL4Q9UJQ4 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
SALL4Q9UJQ4 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.13□□□□□ -1.59
SALL4Q9UJQ4 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.13□□□□□ -1.59
SALL4Q9UJQ4 SMG1P6-201ENST00000532337 2930 ntBASIC5.13□□□□□ -1.59
SALL4Q9UJQ4 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.13□□□□□ -1.59
SALL4Q9UJQ4 RN7SKP115-201ENST00000363177 317 ntBASIC5.13□□□□□ -1.59
SALL4Q9UJQ4 RNU6-1303P-201ENST00000364841 107 ntBASIC5.13□□□□□ -1.59
SALL4Q9UJQ4 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
SALL4Q9UJQ4 RNU2-43P-201ENST00000410306 190 ntBASIC5.13□□□□□ -1.59
SALL4Q9UJQ4 RN7SKP216-201ENST00000411050 312 ntBASIC5.13□□□□□ -1.59
SALL4Q9UJQ4 PGBD4P6-201ENST00000421501 610 ntBASIC5.13□□□□□ -1.59
SALL4Q9UJQ4 PPP1R11P2-201ENST00000423543 382 ntBASIC5.13□□□□□ -1.59
SALL4Q9UJQ4 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC5.13□□□□□ -1.59
SALL4Q9UJQ4 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC5.13□□□□□ -1.59
SALL4Q9UJQ4 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC5.13□□□□□ -1.59
SALL4Q9UJQ4 AL031274.1-201ENST00000450334 232 ntBASIC5.13□□□□□ -1.59
SALL4Q9UJQ4 RPL23AP56-201ENST00000460778 453 ntBASIC5.13□□□□□ -1.59
SALL4Q9UJQ4 RPS27AP13-201ENST00000498403 237 ntBASIC5.13□□□□□ -1.59
SALL4Q9UJQ4 SNORA40.14-201ENST00000516543 86 ntBASIC5.13□□□□□ -1.59
SALL4Q9UJQ4 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC5.13□□□□□ -1.59
SALL4Q9UJQ4 MAL2-201ENST00000522112 573 ntTSL 4 BASIC5.13□□□□□ -1.59
SALL4Q9UJQ4 AC009643.1-201ENST00000532030 391 ntBASIC5.13□□□□□ -1.59
SALL4Q9UJQ4 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC5.13□□□□□ -1.59
SALL4Q9UJQ4 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC5.13□□□□□ -1.59
SALL4Q9UJQ4 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC5.13□□□□□ -1.59
SALL4Q9UJQ4 AC078899.3-201ENST00000599065 212 ntBASIC5.13□□□□□ -1.59
SALL4Q9UJQ4 AC012669.1-201ENST00000603209 283 ntBASIC5.13□□□□□ -1.59
SALL4Q9UJQ4 MIR15A-201ENST00000607334 83 ntBASIC5.13□□□□□ -1.59
SALL4Q9UJQ4 AC093799.2-201ENST00000610062 578 ntBASIC5.13□□□□□ -1.59
SALL4Q9UJQ4 AC091905.4-201ENST00000623432 202 ntBASIC5.13□□□□□ -1.59
SALL4Q9UJQ4 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC5.13□□□□□ -1.59
SALL4Q9UJQ4 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SALL4Q9UJQ4 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.13□□□□□ -1.59
SALL4Q9UJQ4 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SALL4Q9UJQ4 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SALL4Q9UJQ4 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SALL4Q9UJQ4 INTS6P1-201ENST00000504674 2530 ntBASIC5.13□□□□□ -1.59
SALL4Q9UJQ4 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC5.12□□□□□ -1.59
SALL4Q9UJQ4 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.12□□□□□ -1.59
SALL4Q9UJQ4 AC083843.3-201ENST00000623679 2186 ntBASIC5.12□□□□□ -1.59
SALL4Q9UJQ4 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC5.12□□□□□ -1.59
SALL4Q9UJQ4 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC5.12□□□□□ -1.59
SALL4Q9UJQ4 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
SALL4Q9UJQ4 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
SALL4Q9UJQ4 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SALL4Q9UJQ4 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
SALL4Q9UJQ4 RNA5SP428-201ENST00000365129 132 ntBASIC5.12□□□□□ -1.59
SALL4Q9UJQ4 Y_RNA.577-201ENST00000384794 101 ntBASIC5.12□□□□□ -1.59
SALL4Q9UJQ4 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
SALL4Q9UJQ4 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
SALL4Q9UJQ4 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
SALL4Q9UJQ4 MIR1302-6-201ENST00000408466 90 ntBASIC5.12□□□□□ -1.59
SALL4Q9UJQ4 Y_RNA.625-201ENST00000411256 107 ntBASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 216.3 ms