Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 RNU6-48P-201ENST00000384161 107 ntBASIC1.23□□□□□ -2.21
CHD8Q9HCK8 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC1.23□□□□□ -2.21
CHD8Q9HCK8 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC1.23□□□□□ -2.21
CHD8Q9HCK8 SNORD116-26-201ENST00000516006 96 ntBASIC1.23□□□□□ -2.21
CHD8Q9HCK8 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.23□□□□□ -2.21
CHD8Q9HCK8 AL161912.3-201ENST00000605404 628 ntBASIC1.23□□□□□ -2.21
CHD8Q9HCK8 SNORA50A-202ENST00000629536 136 ntBASIC1.23□□□□□ -2.21
CHD8Q9HCK8 AP000553.5-201ENST00000641933 54 ntBASIC1.23□□□□□ -2.21
CHD8Q9HCK8 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC1.23□□□□□ -2.21
CHD8Q9HCK8 DYNLT3P1-201ENST00000378574 347 ntBASIC1.23□□□□□ -2.21
CHD8Q9HCK8 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
CHD8Q9HCK8 AC005517.2-201ENST00000424673 553 ntBASIC1.23□□□□□ -2.21
CHD8Q9HCK8 OR10R1P-201ENST00000441524 1141 ntBASIC1.23□□□□□ -2.21
CHD8Q9HCK8 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
CHD8Q9HCK8 AC239798.3-201ENST00000454459 408 ntBASIC1.23□□□□□ -2.21
CHD8Q9HCK8 PDCD5P1-201ENST00000543528 309 ntBASIC1.23□□□□□ -2.21
CHD8Q9HCK8 CBX3P2-202ENST00000583365 535 ntBASIC1.23□□□□□ -2.21
CHD8Q9HCK8 SNORA40.6-201ENST00000391153 128 ntBASIC1.22□□□□□ -2.21
CHD8Q9HCK8 MIR1304-201ENST00000408243 91 ntBASIC1.22□□□□□ -2.21
CHD8Q9HCK8 CYCSP33-201ENST00000414485 327 ntBASIC1.22□□□□□ -2.21
CHD8Q9HCK8 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.22□□□□□ -2.21
CHD8Q9HCK8 RPL23AP62-201ENST00000463396 453 ntBASIC1.22□□□□□ -2.21
CHD8Q9HCK8 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC1.22□□□□□ -2.21
CHD8Q9HCK8 SCARNA1-201ENST00000517138 166 ntBASIC1.22□□□□□ -2.21
CHD8Q9HCK8 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC1.22□□□□□ -2.21
CHD8Q9HCK8 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC1.22□□□□□ -2.21
CHD8Q9HCK8 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC1.22□□□□□ -2.21
CHD8Q9HCK8 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC1.22□□□□□ -2.21
CHD8Q9HCK8 AC234064.1-201ENST00000436312 247 ntBASIC1.22□□□□□ -2.21
CHD8Q9HCK8 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC1.22□□□□□ -2.21
CHD8Q9HCK8 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC1.22□□□□□ -2.21
CHD8Q9HCK8 AP003033.1-201ENST00000527244 415 ntBASIC1.22□□□□□ -2.21
CHD8Q9HCK8 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC1.22□□□□□ -2.21
CHD8Q9HCK8 AC073413.2-201ENST00000604332 360 ntBASIC1.22□□□□□ -2.21
CHD8Q9HCK8 MZT1P2-201ENST00000604387 248 ntBASIC1.22□□□□□ -2.21
CHD8Q9HCK8 MTCO1P6-201ENST00000481192 1384 ntBASIC1.22□□□□□ -2.21
CHD8Q9HCK8 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.22□□□□□ -2.21
CHD8Q9HCK8 AC018630.2-201ENST00000534866 2403 ntBASIC1.22□□□□□ -2.21
CHD8Q9HCK8 XKRY2-202ENST00000623874 1581 ntBASIC1.21□□□□□ -2.22
CHD8Q9HCK8 XKRY-202ENST00000624960 1581 ntBASIC1.21□□□□□ -2.22
CHD8Q9HCK8 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC1.21□□□□□ -2.22
CHD8Q9HCK8 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC1.21□□□□□ -2.22
CHD8Q9HCK8 SNORA62.2-201ENST00000364672 152 ntBASIC1.21□□□□□ -2.22
CHD8Q9HCK8 AC243772.1-201ENST00000451620 410 ntBASIC1.21□□□□□ -2.22
CHD8Q9HCK8 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.21□□□□□ -2.22
CHD8Q9HCK8 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC1.21□□□□□ -2.22
CHD8Q9HCK8 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC1.21□□□□□ -2.22
CHD8Q9HCK8 AC034102.8-201ENST00000615146 484 ntBASIC1.21□□□□□ -2.22
CHD8Q9HCK8 AC138649.5-201ENST00000637456 137 ntBASIC1.21□□□□□ -2.22
CHD8Q9HCK8 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC1.21□□□□□ -2.22
CHD8Q9HCK8 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC1.21□□□□□ -2.22
CHD8Q9HCK8 AC011155.1-201ENST00000316512 456 ntBASIC1.21□□□□□ -2.22
CHD8Q9HCK8 RNU6-418P-201ENST00000384035 107 ntBASIC1.21□□□□□ -2.22
CHD8Q9HCK8 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC1.21□□□□□ -2.22
CHD8Q9HCK8 RPS29P20-201ENST00000489592 171 ntBASIC1.21□□□□□ -2.22
CHD8Q9HCK8 CYCSP23-201ENST00000519781 313 ntBASIC1.21□□□□□ -2.22
CHD8Q9HCK8 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC1.21□□□□□ -2.22
CHD8Q9HCK8 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC1.21□□□□□ -2.22
CHD8Q9HCK8 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
CHD8Q9HCK8 DEFB108F-201ENST00000344638 222 ntBASIC1.2□□□□□ -2.22
CHD8Q9HCK8 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC1.2□□□□□ -2.22
CHD8Q9HCK8 RPL35AP22-201ENST00000436855 335 ntBASIC1.2□□□□□ -2.22
CHD8Q9HCK8 MTND4LP3-201ENST00000468320 276 ntBASIC1.2□□□□□ -2.22
CHD8Q9HCK8 AC009127.3-201ENST00000570531 403 ntBASIC1.2□□□□□ -2.22
CHD8Q9HCK8 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC1.2□□□□□ -2.22
CHD8Q9HCK8 AC090774.1-201ENST00000435925 246 ntBASIC1.2□□□□□ -2.22
CHD8Q9HCK8 AL161651.1-201ENST00000440882 223 ntBASIC1.2□□□□□ -2.22
CHD8Q9HCK8 MTCO1P53-201ENST00000441633 699 ntBASIC1.2□□□□□ -2.22
CHD8Q9HCK8 AC009961.3-201ENST00000449832 765 ntBASIC1.2□□□□□ -2.22
CHD8Q9HCK8 NAA50-206ENST00000493454 964 ntTSL 2 BASIC1.2□□□□□ -2.22
CHD8Q9HCK8 AC010265.1-201ENST00000513509 211 ntBASIC1.2□□□□□ -2.22
CHD8Q9HCK8 MTND5P4-201ENST00000514978 288 ntBASIC1.2□□□□□ -2.22
CHD8Q9HCK8 SNORA48.9-201ENST00000516419 162 ntBASIC1.2□□□□□ -2.22
CHD8Q9HCK8 VTA1P2-201ENST00000520205 911 ntBASIC1.2□□□□□ -2.22
CHD8Q9HCK8 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.2□□□□□ -2.22
CHD8Q9HCK8 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.2□□□□□ -2.22
CHD8Q9HCK8 AC233266.2-201ENST00000567067 528 ntBASIC1.2□□□□□ -2.22
CHD8Q9HCK8 AC006270.2-201ENST00000578523 652 ntBASIC1.2□□□□□ -2.22
CHD8Q9HCK8 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC1.2□□□□□ -2.22
CHD8Q9HCK8 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC1.2□□□□□ -2.22
CHD8Q9HCK8 AC012531.5-201ENST00000611375 151 ntBASIC1.2□□□□□ -2.22
CHD8Q9HCK8 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC1.19□□□□□ -2.22
CHD8Q9HCK8 MTND4P13-201ENST00000402078 1023 ntBASIC1.19□□□□□ -2.22
CHD8Q9HCK8 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC1.19□□□□□ -2.22
CHD8Q9HCK8 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.19□□□□□ -2.22
CHD8Q9HCK8 RNU4-60P-201ENST00000517239 135 ntBASIC1.19□□□□□ -2.22
CHD8Q9HCK8 MTND5P21-201ENST00000531961 522 ntBASIC1.19□□□□□ -2.22
CHD8Q9HCK8 AC034268.2-201ENST00000571784 482 ntBASIC1.19□□□□□ -2.22
CHD8Q9HCK8 MIR4636-201ENST00000582271 80 ntBASIC1.19□□□□□ -2.22
CHD8Q9HCK8 MIR4295-201ENST00000585286 85 ntBASIC1.19□□□□□ -2.22
CHD8Q9HCK8 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC1.19□□□□□ -2.22
CHD8Q9HCK8 RNU6-173P-201ENST00000364215 104 ntBASIC1.19□□□□□ -2.22
CHD8Q9HCK8 SEC63P1-201ENST00000425785 1258 ntBASIC1.19□□□□□ -2.22
CHD8Q9HCK8 MTCO1P43-201ENST00000431831 488 ntBASIC1.19□□□□□ -2.22
CHD8Q9HCK8 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC1.19□□□□□ -2.22
CHD8Q9HCK8 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.19□□□□□ -2.22
CHD8Q9HCK8 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC1.19□□□□□ -2.22
CHD8Q9HCK8 AL049779.4-201ENST00000604500 156 ntBASIC1.19□□□□□ -2.22
CHD8Q9HCK8 AC011890.2-201ENST00000613393 294 ntBASIC1.19□□□□□ -2.22
CHD8Q9HCK8 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.19□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms