Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC7.19□□□□□ -1.26
RNF39Q9H2S5 MYL6P5-201ENST00000412707 459 ntBASIC7.19□□□□□ -1.26
RNF39Q9H2S5 FAR2P2-201ENST00000413041 594 ntBASIC7.19□□□□□ -1.26
RNF39Q9H2S5 AC007919.1-201ENST00000429380 217 ntBASIC7.19□□□□□ -1.26
RNF39Q9H2S5 AL356867.1-201ENST00000429623 299 ntBASIC7.19□□□□□ -1.26
RNF39Q9H2S5 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC7.19□□□□□ -1.26
RNF39Q9H2S5 TIMM8BP2-201ENST00000445940 251 ntBASIC7.19□□□□□ -1.26
RNF39Q9H2S5 RPSAP50-201ENST00000481955 852 ntBASIC7.19□□□□□ -1.26
RNF39Q9H2S5 IGHV7-34-1-201ENST00000519200 350 ntBASIC7.19□□□□□ -1.26
RNF39Q9H2S5 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
RNF39Q9H2S5 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC7.19□□□□□ -1.26
RNF39Q9H2S5 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC7.19□□□□□ -1.26
RNF39Q9H2S5 AC004232.1-201ENST00000571388 208 ntBASIC7.19□□□□□ -1.26
RNF39Q9H2S5 TCL6_2.1-201ENST00000615162 119 ntBASIC7.19□□□□□ -1.26
RNF39Q9H2S5 Six3os1_4.1-201ENST00000615706 324 ntBASIC7.19□□□□□ -1.26
RNF39Q9H2S5 Six3os1_2.1-201ENST00000616963 217 ntBASIC7.19□□□□□ -1.26
RNF39Q9H2S5 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
RNF39Q9H2S5 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
RNF39Q9H2S5 C4BPAP1-201ENST00000415474 1893 ntBASIC7.19□□□□□ -1.26
RNF39Q9H2S5 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
RNF39Q9H2S5 CASR-205ENST00000639785 10047 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
RNF39Q9H2S5 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC7.19□□□□□ -1.26
RNF39Q9H2S5 VTI1A-201ENST00000393077 4131 ntAPPRIS P1 TSL 2 BASIC7.19□□□□□ -1.26
RNF39Q9H2S5 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
RNF39Q9H2S5 NSUN6-201ENST00000377304 2201 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
RNF39Q9H2S5 LEPR-203ENST00000371058 2805 ntTSL 5 BASIC7.19□□□□□ -1.26
RNF39Q9H2S5 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
RNF39Q9H2S5 GAPVD1-215ENST00000470056 8923 ntTSL 5 BASIC7.18□□□□□ -1.26
RNF39Q9H2S5 POLA1-201ENST00000379059 5440 ntAPPRIS P3 TSL 1 (best) BASIC7.18□□□□□ -1.26
RNF39Q9H2S5 POLA1-206ENST00000611764 5434 ntAPPRIS ALT2 TSL 5 BASIC7.18□□□□□ -1.26
RNF39Q9H2S5 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
RNF39Q9H2S5 AC007993.1-201ENST00000621298 2430 ntBASIC7.18□□□□□ -1.26
RNF39Q9H2S5 UG0898H09-202ENST00000623646 7040 ntBASIC7.18□□□□□ -1.26
RNF39Q9H2S5 MUC21-201ENST00000376296 3651 ntAPPRIS P2 TSL 1 (best) BASIC7.18□□□□□ -1.26
RNF39Q9H2S5 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
RNF39Q9H2S5 VTRNA3-1P-201ENST00000362552 102 ntBASIC7.18□□□□□ -1.26
RNF39Q9H2S5 SNORD115-37-201ENST00000363768 82 ntBASIC7.18□□□□□ -1.26
RNF39Q9H2S5 RNU1-84P-201ENST00000365447 164 ntBASIC7.18□□□□□ -1.26
RNF39Q9H2S5 RN7SKP187-201ENST00000365536 330 ntBASIC7.18□□□□□ -1.26
RNF39Q9H2S5 SNORD61-201ENST00000384252 73 ntBASIC7.18□□□□□ -1.26
RNF39Q9H2S5 AC017078.1-201ENST00000416146 368 ntBASIC7.18□□□□□ -1.26
RNF39Q9H2S5 AL121890.1-201ENST00000435457 205 ntBASIC7.18□□□□□ -1.26
RNF39Q9H2S5 AP000936.3-201ENST00000438127 255 ntBASIC7.18□□□□□ -1.26
RNF39Q9H2S5 RNU6ATAC28P-201ENST00000459249 118 ntBASIC7.18□□□□□ -1.26
RNF39Q9H2S5 RN7SL165P-201ENST00000477476 291 ntBASIC7.18□□□□□ -1.26
RNF39Q9H2S5 RN7SKP277-201ENST00000516895 283 ntBASIC7.18□□□□□ -1.26
RNF39Q9H2S5 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC7.18□□□□□ -1.26
RNF39Q9H2S5 AC107958.1-201ENST00000556576 290 ntBASIC7.18□□□□□ -1.26
RNF39Q9H2S5 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC7.18□□□□□ -1.26
RNF39Q9H2S5 AL589743.6-201ENST00000611025 117 ntBASIC7.18□□□□□ -1.26
RNF39Q9H2S5 AC005562.2-201ENST00000618264 111 ntBASIC7.18□□□□□ -1.26
RNF39Q9H2S5 ZNF23-204ENST00000428724 1932 ntAPPRIS P3 TSL 1 (best) BASIC7.18□□□□□ -1.26
RNF39Q9H2S5 C1QTNF7-201ENST00000295297 4516 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
RNF39Q9H2S5 STARD4-AS1-201ENST00000500779 5525 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
RNF39Q9H2S5 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC7.18□□□□□ -1.26
RNF39Q9H2S5 BEST1-202ENST00000449131 4267 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
RNF39Q9H2S5 NACA-203ENST00000454682 6629 ntTSL 5 BASIC7.18□□□□□ -1.26
RNF39Q9H2S5 ARHGAP20-203ENST00000527598 5998 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
RNF39Q9H2S5 AC020658.2-201ENST00000559030 4020 ntBASIC7.18□□□□□ -1.26
RNF39Q9H2S5 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC7.18□□□□□ -1.26
RNF39Q9H2S5 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC7.18□□□□□ -1.26
RNF39Q9H2S5 REV3L-203ENST00000368805 10461 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
RNF39Q9H2S5 LINC00683-202ENST00000579781 3510 ntTSL 2 BASIC7.18□□□□□ -1.26
RNF39Q9H2S5 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
RNF39Q9H2S5 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC7.18□□□□□ -1.26
RNF39Q9H2S5 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC7.17□□□□□ -1.26
RNF39Q9H2S5 AP003175.1-201ENST00000641383 6658 ntBASIC7.17□□□□□ -1.26
RNF39Q9H2S5 NRXN3-203ENST00000428277 4219 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
RNF39Q9H2S5 PTPN14-201ENST00000366956 12985 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
RNF39Q9H2S5 PPFIA2-201ENST00000333447 5517 ntTSL 5 BASIC7.17□□□□□ -1.26
RNF39Q9H2S5 PDE4DIP-206ENST00000369356 8307 ntAPPRIS P4 TSL 1 (best) BASIC7.17□□□□□ -1.26
RNF39Q9H2S5 TRPS1-203ENST00000395715 9990 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
RNF39Q9H2S5 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
RNF39Q9H2S5 ORC3-206ENST00000546266 2470 ntTSL 2 BASIC7.17□□□□□ -1.26
RNF39Q9H2S5 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
RNF39Q9H2S5 CPSF6-202ENST00000435070 6616 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
RNF39Q9H2S5 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
RNF39Q9H2S5 RNU6-661P-201ENST00000362409 107 ntBASIC7.17□□□□□ -1.26
RNF39Q9H2S5 Y_RNA.57-201ENST00000362806 113 ntBASIC7.17□□□□□ -1.26
RNF39Q9H2S5 RNU1-96P-201ENST00000364163 162 ntBASIC7.17□□□□□ -1.26
RNF39Q9H2S5 BMPR2-202ENST00000374580 11461 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
RNF39Q9H2S5 MIR621-201ENST00000384919 96 ntBASIC7.17□□□□□ -1.26
RNF39Q9H2S5 Z98745.1-201ENST00000402553 494 ntBASIC7.17□□□□□ -1.26
RNF39Q9H2S5 AL929472.1-201ENST00000417484 429 ntBASIC7.17□□□□□ -1.26
RNF39Q9H2S5 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC7.17□□□□□ -1.26
RNF39Q9H2S5 RN7SL738P-201ENST00000470264 297 ntBASIC7.17□□□□□ -1.26
RNF39Q9H2S5 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC7.17□□□□□ -1.26
RNF39Q9H2S5 AC018645.1-201ENST00000505003 109 ntBASIC7.17□□□□□ -1.26
RNF39Q9H2S5 RNU6-1183P-201ENST00000517054 60 ntBASIC7.17□□□□□ -1.26
RNF39Q9H2S5 AC011602.1-201ENST00000546484 331 ntBASIC7.17□□□□□ -1.26
RNF39Q9H2S5 AC131009.3-201ENST00000621809 287 ntBASIC7.17□□□□□ -1.26
RNF39Q9H2S5 AC018692.3-201ENST00000623929 123 ntBASIC7.17□□□□□ -1.26
RNF39Q9H2S5 NEDD4L-207ENST00000435432 3417 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
RNF39Q9H2S5 ESRRG-201ENST00000359162 5197 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
RNF39Q9H2S5 ADAM3A-203ENST00000461344 2157 ntBASIC7.17□□□□□ -1.26
RNF39Q9H2S5 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC7.17□□□□□ -1.26
RNF39Q9H2S5 SETDB1-201ENST00000271640 4437 ntAPPRIS ALT1 TSL 1 (best) BASIC7.17□□□□□ -1.26
RNF39Q9H2S5 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
RNF39Q9H2S5 TMEM192-201ENST00000306480 10012 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
RNF39Q9H2S5 GRIA4-212ENST00000530497 5059 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms