Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
COL25A1Q9BXS0 RNU6-754P-201ENST00000391166 107 ntBASIC5.3□□□□□ -1.56
COL25A1Q9BXS0 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
COL25A1Q9BXS0 PVALB-202ENST00000404171 422 ntTSL 2 BASIC5.3□□□□□ -1.56
COL25A1Q9BXS0 AC092809.3-201ENST00000415453 231 ntBASIC5.3□□□□□ -1.56
COL25A1Q9BXS0 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC5.3□□□□□ -1.56
COL25A1Q9BXS0 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC5.3□□□□□ -1.56
COL25A1Q9BXS0 AC092573.2-201ENST00000434546 243 ntBASIC5.3□□□□□ -1.56
COL25A1Q9BXS0 NOP56P2-201ENST00000447491 769 ntBASIC5.3□□□□□ -1.56
COL25A1Q9BXS0 AL596266.1-201ENST00000448132 400 ntBASIC5.3□□□□□ -1.56
COL25A1Q9BXS0 AC079168.2-201ENST00000453977 416 ntBASIC5.3□□□□□ -1.56
COL25A1Q9BXS0 COX7A2P2-201ENST00000505291 250 ntBASIC5.3□□□□□ -1.56
COL25A1Q9BXS0 SNORD116-25-201ENST00000516517 92 ntBASIC5.3□□□□□ -1.56
COL25A1Q9BXS0 MRPL49P2-201ENST00000521066 465 ntBASIC5.3□□□□□ -1.56
COL25A1Q9BXS0 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.3□□□□□ -1.56
COL25A1Q9BXS0 MIR4679-2-201ENST00000578358 77 ntBASIC5.3□□□□□ -1.56
COL25A1Q9BXS0 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC5.3□□□□□ -1.56
COL25A1Q9BXS0 U1.31-201ENST00000620022 160 ntBASIC5.3□□□□□ -1.56
COL25A1Q9BXS0 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.3□□□□□ -1.56
COL25A1Q9BXS0 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.3□□□□□ -1.56
COL25A1Q9BXS0 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC5.3□□□□□ -1.56
COL25A1Q9BXS0 DMD-228ENST00000541735 7080 ntTSL 5 BASIC5.3□□□□□ -1.56
COL25A1Q9BXS0 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
COL25A1Q9BXS0 AOX3P-204ENST00000491025 2107 ntBASIC5.3□□□□□ -1.56
COL25A1Q9BXS0 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
COL25A1Q9BXS0 AC105114.1-201ENST00000624795 1862 ntBASIC5.3□□□□□ -1.56
COL25A1Q9BXS0 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
COL25A1Q9BXS0 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
COL25A1Q9BXS0 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
COL25A1Q9BXS0 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
COL25A1Q9BXS0 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
COL25A1Q9BXS0 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
COL25A1Q9BXS0 AC106871.1-201ENST00000568324 3102 ntBASIC5.29□□□□□ -1.56
COL25A1Q9BXS0 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
COL25A1Q9BXS0 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
COL25A1Q9BXS0 MFSD8-239ENST00000641590 2479 ntBASIC5.29□□□□□ -1.56
COL25A1Q9BXS0 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC5.29□□□□□ -1.56
COL25A1Q9BXS0 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
COL25A1Q9BXS0 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
COL25A1Q9BXS0 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC5.29□□□□□ -1.56
COL25A1Q9BXS0 RNU6-834P-201ENST00000362367 110 ntBASIC5.29□□□□□ -1.56
COL25A1Q9BXS0 RNU6-371P-201ENST00000364283 108 ntBASIC5.29□□□□□ -1.56
COL25A1Q9BXS0 RNA5SP267-201ENST00000364893 126 ntBASIC5.29□□□□□ -1.56
COL25A1Q9BXS0 Y_RNA.358-201ENST00000365491 99 ntBASIC5.29□□□□□ -1.56
COL25A1Q9BXS0 SNORD82-201ENST00000365530 70 ntBASIC5.29□□□□□ -1.56
COL25A1Q9BXS0 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
COL25A1Q9BXS0 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC5.29□□□□□ -1.56
COL25A1Q9BXS0 SNORD63-201ENST00000384262 68 ntBASIC5.29□□□□□ -1.56
COL25A1Q9BXS0 RNU1-13P-201ENST00000384499 162 ntBASIC5.29□□□□□ -1.56
COL25A1Q9BXS0 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC5.29□□□□□ -1.56
COL25A1Q9BXS0 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC5.29□□□□□ -1.56
COL25A1Q9BXS0 RPS15AP6-201ENST00000420703 385 ntBASIC5.29□□□□□ -1.56
COL25A1Q9BXS0 AL160275.3-201ENST00000423876 471 ntBASIC5.29□□□□□ -1.56
COL25A1Q9BXS0 PPIAP13-201ENST00000434706 478 ntBASIC5.29□□□□□ -1.56
COL25A1Q9BXS0 TBCAP1-201ENST00000436520 327 ntBASIC5.29□□□□□ -1.56
COL25A1Q9BXS0 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC5.29□□□□□ -1.56
COL25A1Q9BXS0 AC133134.1-201ENST00000466800 359 ntBASIC5.29□□□□□ -1.56
COL25A1Q9BXS0 AC016065.2-201ENST00000514530 444 ntBASIC5.29□□□□□ -1.56
COL25A1Q9BXS0 AC104057.1-201ENST00000515547 497 ntBASIC5.29□□□□□ -1.56
COL25A1Q9BXS0 RNU6-1012P-201ENST00000516606 109 ntBASIC5.29□□□□□ -1.56
COL25A1Q9BXS0 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.29□□□□□ -1.56
COL25A1Q9BXS0 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC5.29□□□□□ -1.56
COL25A1Q9BXS0 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.29□□□□□ -1.56
COL25A1Q9BXS0 HMGN2P47-201ENST00000559378 272 ntBASIC5.29□□□□□ -1.56
COL25A1Q9BXS0 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC5.29□□□□□ -1.56
COL25A1Q9BXS0 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.29□□□□□ -1.56
COL25A1Q9BXS0 RNU6-84P-201ENST00000607737 102 ntBASIC5.29□□□□□ -1.56
COL25A1Q9BXS0 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC5.29□□□□□ -1.56
COL25A1Q9BXS0 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC5.29□□□□□ -1.56
COL25A1Q9BXS0 Z99571.1-201ENST00000636677 394 ntBASIC5.29□□□□□ -1.56
COL25A1Q9BXS0 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
COL25A1Q9BXS0 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
COL25A1Q9BXS0 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
COL25A1Q9BXS0 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.29□□□□□ -1.56
COL25A1Q9BXS0 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
COL25A1Q9BXS0 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
COL25A1Q9BXS0 TMEFF2-203ENST00000409056 3364 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
COL25A1Q9BXS0 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.29□□□□□ -1.56
COL25A1Q9BXS0 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
COL25A1Q9BXS0 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
COL25A1Q9BXS0 DOCK11P1-201ENST00000553480 5932 ntBASIC5.28□□□□□ -1.56
COL25A1Q9BXS0 TTC41P-205ENST00000551270 3963 ntBASIC5.28□□□□□ -1.56
COL25A1Q9BXS0 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
COL25A1Q9BXS0 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
COL25A1Q9BXS0 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
COL25A1Q9BXS0 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC5.28□□□□□ -1.56
COL25A1Q9BXS0 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC5.28□□□□□ -1.56
COL25A1Q9BXS0 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC5.28□□□□□ -1.56
COL25A1Q9BXS0 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.28□□□□□ -1.56
COL25A1Q9BXS0 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC5.28□□□□□ -1.56
COL25A1Q9BXS0 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC5.28□□□□□ -1.56
COL25A1Q9BXS0 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC5.28□□□□□ -1.56
COL25A1Q9BXS0 NDUFB4P4-201ENST00000404822 243 ntBASIC5.28□□□□□ -1.56
COL25A1Q9BXS0 RNU2-15P-201ENST00000410692 191 ntBASIC5.28□□□□□ -1.56
COL25A1Q9BXS0 AC022022.1-201ENST00000430304 178 ntBASIC5.28□□□□□ -1.56
COL25A1Q9BXS0 RPL23AP33-201ENST00000442301 452 ntBASIC5.28□□□□□ -1.56
COL25A1Q9BXS0 PPP1R11P1-201ENST00000486095 376 ntBASIC5.28□□□□□ -1.56
COL25A1Q9BXS0 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
COL25A1Q9BXS0 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
COL25A1Q9BXS0 AC105254.2-201ENST00000603636 436 ntBASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 162.2 ms