Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 RNA5SP113-201ENST00000410486 84 ntBASIC2.76□□□□□ -1.97
LITAFQ99732 RN7SKP140-201ENST00000411196 284 ntBASIC2.76□□□□□ -1.97
LITAFQ99732 RN7SKP100-201ENST00000411258 284 ntBASIC2.76□□□□□ -1.97
LITAFQ99732 USP9YP20-201ENST00000419224 558 ntBASIC2.76□□□□□ -1.97
LITAFQ99732 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.76□□□□□ -1.97
LITAFQ99732 HMGB3P11-201ENST00000440127 604 ntBASIC2.76□□□□□ -1.97
LITAFQ99732 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC2.76□□□□□ -1.97
LITAFQ99732 DHFRP3-201ENST00000455595 559 ntBASIC2.76□□□□□ -1.97
LITAFQ99732 SETP20-201ENST00000457046 852 ntBASIC2.76□□□□□ -1.97
LITAFQ99732 RN7SL172P-201ENST00000460535 303 ntBASIC2.76□□□□□ -1.97
LITAFQ99732 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC2.76□□□□□ -1.97
LITAFQ99732 RN7SL738P-201ENST00000470264 297 ntBASIC2.76□□□□□ -1.97
LITAFQ99732 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.76□□□□□ -1.97
LITAFQ99732 RN7SL717P-201ENST00000478343 297 ntBASIC2.76□□□□□ -1.97
LITAFQ99732 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC2.76□□□□□ -1.97
LITAFQ99732 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC2.76□□□□□ -1.97
LITAFQ99732 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.76□□□□□ -1.97
LITAFQ99732 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC2.76□□□□□ -1.97
LITAFQ99732 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC2.76□□□□□ -1.97
LITAFQ99732 VN1R104P-201ENST00000505115 1009 ntBASIC2.76□□□□□ -1.97
LITAFQ99732 HMGN1P13-201ENST00000505795 138 ntBASIC2.76□□□□□ -1.97
LITAFQ99732 KLHL2P1-201ENST00000508691 521 ntBASIC2.76□□□□□ -1.97
LITAFQ99732 AC026726.1-201ENST00000512859 601 ntBASIC2.76□□□□□ -1.97
LITAFQ99732 GMPSP1-201ENST00000514075 579 ntBASIC2.76□□□□□ -1.97
LITAFQ99732 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.76□□□□□ -1.97
LITAFQ99732 SNORA31.3-201ENST00000516029 96 ntBASIC2.76□□□□□ -1.97
LITAFQ99732 RN7SKP276-201ENST00000516242 268 ntBASIC2.76□□□□□ -1.97
LITAFQ99732 Y_RNA.689-201ENST00000516589 107 ntBASIC2.76□□□□□ -1.97
LITAFQ99732 RNU6-1153P-201ENST00000516760 105 ntBASIC2.76□□□□□ -1.97
LITAFQ99732 Y_RNA.701-201ENST00000516812 110 ntBASIC2.76□□□□□ -1.97
LITAFQ99732 AP001804.3-201ENST00000525146 880 ntBASIC2.76□□□□□ -1.97
LITAFQ99732 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC2.76□□□□□ -1.97
LITAFQ99732 AC008033.2-201ENST00000542626 177 ntBASIC2.76□□□□□ -1.97
LITAFQ99732 NACA-211ENST00000548563 827 ntTSL 5 BASIC2.76□□□□□ -1.97
LITAFQ99732 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC2.76□□□□□ -1.97
LITAFQ99732 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC2.76□□□□□ -1.97
LITAFQ99732 FAM60BP-201ENST00000578364 658 ntBASIC2.76□□□□□ -1.97
LITAFQ99732 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC2.76□□□□□ -1.97
LITAFQ99732 SNRPGP15-201ENST00000600149 222 ntBASIC2.76□□□□□ -1.97
LITAFQ99732 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC2.76□□□□□ -1.97
LITAFQ99732 AL138889.2-201ENST00000603883 242 ntBASIC2.76□□□□□ -1.97
LITAFQ99732 TEX41-238ENST00000604253 709 ntTSL 5 BASIC2.76□□□□□ -1.97
LITAFQ99732 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC2.76□□□□□ -1.97
LITAFQ99732 AL158032.1-201ENST00000605401 106 ntBASIC2.76□□□□□ -1.97
LITAFQ99732 AC016727.1-205ENST00000605437 569 ntBASIC2.76□□□□□ -1.97
LITAFQ99732 AL022345.1-201ENST00000607292 135 ntBASIC2.76□□□□□ -1.97
LITAFQ99732 AC103710.3-201ENST00000608157 948 ntBASIC2.76□□□□□ -1.97
LITAFQ99732 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
LITAFQ99732 AC104237.2-201ENST00000612456 443 ntBASIC2.76□□□□□ -1.97
LITAFQ99732 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC2.76□□□□□ -1.97
LITAFQ99732 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.76□□□□□ -1.97
LITAFQ99732 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC2.76□□□□□ -1.97
LITAFQ99732 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
LITAFQ99732 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC2.76□□□□□ -1.97
LITAFQ99732 AC004925.1-201ENST00000624256 2706 ntBASIC2.76□□□□□ -1.97
LITAFQ99732 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC2.75□□□□□ -1.97
LITAFQ99732 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC2.75□□□□□ -1.97
LITAFQ99732 LARP1BP1-201ENST00000506036 1359 ntBASIC2.75□□□□□ -1.97
LITAFQ99732 PRO1804-201ENST00000623780 2050 ntBASIC2.75□□□□□ -1.97
LITAFQ99732 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
LITAFQ99732 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
LITAFQ99732 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC2.75□□□□□ -1.97
LITAFQ99732 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC2.75□□□□□ -1.97
LITAFQ99732 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC2.75□□□□□ -1.97
LITAFQ99732 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
LITAFQ99732 TNPO1P3-201ENST00000436471 2662 ntBASIC2.75□□□□□ -1.97
LITAFQ99732 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
LITAFQ99732 RPL23P2-201ENST00000320371 421 ntBASIC2.75□□□□□ -1.97
LITAFQ99732 AL590240.1-201ENST00000334118 313 ntBASIC2.75□□□□□ -1.97
LITAFQ99732 FRG1CP-201ENST00000358464 769 ntBASIC2.75□□□□□ -1.97
LITAFQ99732 RN7SKP162-201ENST00000363605 345 ntBASIC2.75□□□□□ -1.97
LITAFQ99732 Y_RNA.301-201ENST00000364990 103 ntBASIC2.75□□□□□ -1.97
LITAFQ99732 RN7SKP187-201ENST00000365536 330 ntBASIC2.75□□□□□ -1.97
LITAFQ99732 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
LITAFQ99732 RNU6-190P-201ENST00000384154 102 ntBASIC2.75□□□□□ -1.97
LITAFQ99732 AL356967.1-201ENST00000406305 431 ntBASIC2.75□□□□□ -1.97
LITAFQ99732 RNU6ATAC7P-201ENST00000408111 127 ntBASIC2.75□□□□□ -1.97
LITAFQ99732 MIR1286-201ENST00000408112 78 ntBASIC2.75□□□□□ -1.97
LITAFQ99732 POLHP1-201ENST00000411806 470 ntBASIC2.75□□□□□ -1.97
LITAFQ99732 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC2.75□□□□□ -1.97
LITAFQ99732 AC092809.3-201ENST00000415453 231 ntBASIC2.75□□□□□ -1.97
LITAFQ99732 TOMM22P1-201ENST00000418578 312 ntBASIC2.75□□□□□ -1.97
LITAFQ99732 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
LITAFQ99732 RPL21P109-201ENST00000422213 475 ntBASIC2.75□□□□□ -1.97
LITAFQ99732 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC2.75□□□□□ -1.97
LITAFQ99732 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
LITAFQ99732 AC104058.1-201ENST00000448028 297 ntBASIC2.75□□□□□ -1.97
LITAFQ99732 RPS15AP27-201ENST00000449183 343 ntBASIC2.75□□□□□ -1.97
LITAFQ99732 AC010285.1-201ENST00000470580 392 ntBASIC2.75□□□□□ -1.97
LITAFQ99732 RPL21P93-201ENST00000480465 489 ntBASIC2.75□□□□□ -1.97
LITAFQ99732 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
LITAFQ99732 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC2.75□□□□□ -1.97
LITAFQ99732 HMGB1P22-201ENST00000505315 124 ntBASIC2.75□□□□□ -1.97
LITAFQ99732 MLLT10P2-201ENST00000506434 249 ntBASIC2.75□□□□□ -1.97
LITAFQ99732 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC2.75□□□□□ -1.97
LITAFQ99732 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC2.75□□□□□ -1.97
LITAFQ99732 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC2.75□□□□□ -1.97
LITAFQ99732 RNU6-864P-201ENST00000516256 108 ntBASIC2.75□□□□□ -1.97
LITAFQ99732 RNU6-677P-201ENST00000516914 101 ntBASIC2.75□□□□□ -1.97
LITAFQ99732 RNU6-1231P-201ENST00000517185 103 ntBASIC2.75□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms