Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC5.29□□□□□ -1.56
IFT43Q96FT9 DAP3P1-201ENST00000441522 278 ntBASIC5.29□□□□□ -1.56
IFT43Q96FT9 AL360271.2-201ENST00000447710 161 ntBASIC5.29□□□□□ -1.56
IFT43Q96FT9 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC5.29□□□□□ -1.56
IFT43Q96FT9 CREM-230ENST00000474931 626 ntTSL 2 BASIC5.29□□□□□ -1.56
IFT43Q96FT9 RN7SL814P-201ENST00000487715 300 ntBASIC5.29□□□□□ -1.56
IFT43Q96FT9 RN7SL808P-201ENST00000496066 299 ntBASIC5.29□□□□□ -1.56
IFT43Q96FT9 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC5.29□□□□□ -1.56
IFT43Q96FT9 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC5.29□□□□□ -1.56
IFT43Q96FT9 HMGB3P17-201ENST00000504195 649 ntBASIC5.29□□□□□ -1.56
IFT43Q96FT9 MTND1P19-201ENST00000511780 315 ntBASIC5.29□□□□□ -1.56
IFT43Q96FT9 SNRPGP16-201ENST00000533275 226 ntBASIC5.29□□□□□ -1.56
IFT43Q96FT9 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC5.29□□□□□ -1.56
IFT43Q96FT9 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC5.29□□□□□ -1.56
IFT43Q96FT9 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC5.29□□□□□ -1.56
IFT43Q96FT9 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC5.29□□□□□ -1.56
IFT43Q96FT9 MIR3691-201ENST00000578066 90 ntBASIC5.29□□□□□ -1.56
IFT43Q96FT9 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
IFT43Q96FT9 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC5.29□□□□□ -1.56
IFT43Q96FT9 AL049539.1-201ENST00000611964 459 ntBASIC5.29□□□□□ -1.56
IFT43Q96FT9 AC137590.2-201ENST00000619709 240 ntBASIC5.29□□□□□ -1.56
IFT43Q96FT9 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
IFT43Q96FT9 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC5.29□□□□□ -1.56
IFT43Q96FT9 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC5.29□□□□□ -1.56
IFT43Q96FT9 AC005183.1-201ENST00000603687 1979 ntBASIC5.29□□□□□ -1.56
IFT43Q96FT9 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
IFT43Q96FT9 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
IFT43Q96FT9 AC004817.4-201ENST00000602396 3625 ntBASIC5.29□□□□□ -1.56
IFT43Q96FT9 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5.28□□□□□ -1.56
IFT43Q96FT9 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.28□□□□□ -1.56
IFT43Q96FT9 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
IFT43Q96FT9 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
IFT43Q96FT9 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
IFT43Q96FT9 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
IFT43Q96FT9 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
IFT43Q96FT9 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
IFT43Q96FT9 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.28□□□□□ -1.56
IFT43Q96FT9 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
IFT43Q96FT9 RNU4-42P-201ENST00000364738 142 ntBASIC5.28□□□□□ -1.56
IFT43Q96FT9 RNA5SP90-201ENST00000364801 99 ntBASIC5.28□□□□□ -1.56
IFT43Q96FT9 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
IFT43Q96FT9 Y_RNA.478-201ENST00000384358 107 ntBASIC5.28□□□□□ -1.56
IFT43Q96FT9 RNU1-106P-201ENST00000384382 164 ntBASIC5.28□□□□□ -1.56
IFT43Q96FT9 RNU6-790P-201ENST00000384479 105 ntBASIC5.28□□□□□ -1.56
IFT43Q96FT9 MIR600-201ENST00000385007 98 ntBASIC5.28□□□□□ -1.56
IFT43Q96FT9 RNA5SP296-201ENST00000410523 111 ntBASIC5.28□□□□□ -1.56
IFT43Q96FT9 RPS15AP6-201ENST00000420703 385 ntBASIC5.28□□□□□ -1.56
IFT43Q96FT9 ELOCP20-201ENST00000422460 345 ntBASIC5.28□□□□□ -1.56
IFT43Q96FT9 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC5.28□□□□□ -1.56
IFT43Q96FT9 AL353997.1-201ENST00000432936 108 ntBASIC5.28□□□□□ -1.56
IFT43Q96FT9 RPS3AP12-201ENST00000443616 753 ntBASIC5.28□□□□□ -1.56
IFT43Q96FT9 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC5.28□□□□□ -1.56
IFT43Q96FT9 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC5.28□□□□□ -1.56
IFT43Q96FT9 SNORA25.11-201ENST00000515935 105 ntBASIC5.28□□□□□ -1.56
IFT43Q96FT9 SNORA31.22-201ENST00000517204 135 ntBASIC5.28□□□□□ -1.56
IFT43Q96FT9 RRN3P3-201ENST00000549207 578 ntBASIC5.28□□□□□ -1.56
IFT43Q96FT9 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC5.28□□□□□ -1.56
IFT43Q96FT9 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC5.28□□□□□ -1.56
IFT43Q96FT9 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC5.28□□□□□ -1.56
IFT43Q96FT9 MIR4273-201ENST00000582824 84 ntBASIC5.28□□□□□ -1.56
IFT43Q96FT9 MIR548AC-201ENST00000585049 88 ntBASIC5.28□□□□□ -1.56
IFT43Q96FT9 BDH2P1-201ENST00000602288 736 ntBASIC5.28□□□□□ -1.56
IFT43Q96FT9 AC008814.1-201ENST00000603797 406 ntBASIC5.28□□□□□ -1.56
IFT43Q96FT9 AC012603.1-201ENST00000606424 528 ntBASIC5.28□□□□□ -1.56
IFT43Q96FT9 AC096772.1-201ENST00000609146 564 ntBASIC5.28□□□□□ -1.56
IFT43Q96FT9 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC5.28□□□□□ -1.56
IFT43Q96FT9 U2.22-201ENST00000636441 106 ntBASIC5.28□□□□□ -1.56
IFT43Q96FT9 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC5.28□□□□□ -1.56
IFT43Q96FT9 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
IFT43Q96FT9 ZNF285B-201ENST00000561698 1767 ntBASIC5.28□□□□□ -1.56
IFT43Q96FT9 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
IFT43Q96FT9 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
IFT43Q96FT9 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.28□□□□□ -1.56
IFT43Q96FT9 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
IFT43Q96FT9 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC5.28□□□□□ -1.56
IFT43Q96FT9 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.27□□□□□ -1.57
IFT43Q96FT9 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC5.27□□□□□ -1.57
IFT43Q96FT9 SMG1P6-201ENST00000532337 2930 ntBASIC5.27□□□□□ -1.57
IFT43Q96FT9 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
IFT43Q96FT9 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
IFT43Q96FT9 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC5.27□□□□□ -1.57
IFT43Q96FT9 ZNF72P-201ENST00000425869 1908 ntBASIC5.27□□□□□ -1.57
IFT43Q96FT9 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.27□□□□□ -1.57
IFT43Q96FT9 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
IFT43Q96FT9 RNU1-35P-201ENST00000362782 153 ntBASIC5.27□□□□□ -1.57
IFT43Q96FT9 RN7SKP115-201ENST00000363177 317 ntBASIC5.27□□□□□ -1.57
IFT43Q96FT9 U3.35-201ENST00000408405 208 ntBASIC5.27□□□□□ -1.57
IFT43Q96FT9 RNU6ATAC21P-201ENST00000408656 126 ntBASIC5.27□□□□□ -1.57
IFT43Q96FT9 RNU6-607P-201ENST00000411283 108 ntBASIC5.27□□□□□ -1.57
IFT43Q96FT9 AC104333.2-201ENST00000422630 192 ntBASIC5.27□□□□□ -1.57
IFT43Q96FT9 UBE2D3P2-201ENST00000424409 445 ntBASIC5.27□□□□□ -1.57
IFT43Q96FT9 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC5.27□□□□□ -1.57
IFT43Q96FT9 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC5.27□□□□□ -1.57
IFT43Q96FT9 AL590664.1-201ENST00000448065 339 ntBASIC5.27□□□□□ -1.57
IFT43Q96FT9 RPL29P29-201ENST00000448725 423 ntBASIC5.27□□□□□ -1.57
IFT43Q96FT9 AC108161.1-201ENST00000461060 402 ntBASIC5.27□□□□□ -1.57
IFT43Q96FT9 AL591473.1-201ENST00000464297 313 ntBASIC5.27□□□□□ -1.57
IFT43Q96FT9 AC069499.1-201ENST00000489433 509 ntBASIC5.27□□□□□ -1.57
IFT43Q96FT9 IRF5P1-201ENST00000504852 2164 ntBASIC5.27□□□□□ -1.57
IFT43Q96FT9 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms