Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 HMGB1P19-201ENST00000517578 577 ntBASIC4.73□□□□□ -1.65
DDX1Q92499 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC4.73□□□□□ -1.65
DDX1Q92499 HMGB1P41-201ENST00000520234 440 ntBASIC4.73□□□□□ -1.65
DDX1Q92499 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.73□□□□□ -1.65
DDX1Q92499 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC4.73□□□□□ -1.65
DDX1Q92499 AC100770.1-201ENST00000532310 322 ntBASIC4.73□□□□□ -1.65
DDX1Q92499 SNRPGP18-201ENST00000553000 214 ntBASIC4.73□□□□□ -1.65
DDX1Q92499 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.73□□□□□ -1.65
DDX1Q92499 AC084783.1-201ENST00000565846 910 ntBASIC4.73□□□□□ -1.65
DDX1Q92499 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC4.73□□□□□ -1.65
DDX1Q92499 IPO5P1-202ENST00000600039 287 ntBASIC4.73□□□□□ -1.65
DDX1Q92499 AC007938.3-201ENST00000604965 623 ntBASIC4.73□□□□□ -1.65
DDX1Q92499 AL031666.3-201ENST00000609320 1006 ntBASIC4.73□□□□□ -1.65
DDX1Q92499 TUG1_2.1-201ENST00000614234 87 ntBASIC4.73□□□□□ -1.65
DDX1Q92499 AC006133.1-201ENST00000617106 264 ntBASIC4.73□□□□□ -1.65
DDX1Q92499 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.73□□□□□ -1.65
DDX1Q92499 AC007546.2-201ENST00000623996 360 ntBASIC4.73□□□□□ -1.65
DDX1Q92499 AL359757.2-201ENST00000624309 274 ntBASIC4.73□□□□□ -1.65
DDX1Q92499 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC4.73□□□□□ -1.65
DDX1Q92499 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
DDX1Q92499 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC4.73□□□□□ -1.65
DDX1Q92499 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
DDX1Q92499 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
DDX1Q92499 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.73□□□□□ -1.65
DDX1Q92499 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.72□□□□□ -1.65
DDX1Q92499 AL365440.1-201ENST00000436135 2167 ntBASIC4.72□□□□□ -1.65
DDX1Q92499 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
DDX1Q92499 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
DDX1Q92499 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
DDX1Q92499 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.72□□□□□ -1.65
DDX1Q92499 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.72□□□□□ -1.65
DDX1Q92499 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.72□□□□□ -1.65
DDX1Q92499 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
DDX1Q92499 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
DDX1Q92499 RNU6-1279P-201ENST00000383917 103 ntBASIC4.72□□□□□ -1.65
DDX1Q92499 RNU6-39P-201ENST00000384344 107 ntBASIC4.72□□□□□ -1.65
DDX1Q92499 RNU6-606P-201ENST00000384721 111 ntBASIC4.72□□□□□ -1.65
DDX1Q92499 MIR670-201ENST00000390142 98 ntBASIC4.72□□□□□ -1.65
DDX1Q92499 HDGFP1-201ENST00000405943 252 ntBASIC4.72□□□□□ -1.65
DDX1Q92499 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.72□□□□□ -1.65
DDX1Q92499 OR2AS1P-201ENST00000427827 319 ntBASIC4.72□□□□□ -1.65
DDX1Q92499 MED13P1-201ENST00000428342 171 ntBASIC4.72□□□□□ -1.65
DDX1Q92499 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC4.72□□□□□ -1.65
DDX1Q92499 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC4.72□□□□□ -1.65
DDX1Q92499 RPL23AP83-201ENST00000434984 473 ntBASIC4.72□□□□□ -1.65
DDX1Q92499 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC4.72□□□□□ -1.65
DDX1Q92499 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC4.72□□□□□ -1.65
DDX1Q92499 DDX3P2-201ENST00000446138 111 ntBASIC4.72□□□□□ -1.65
DDX1Q92499 HMGB3P22-202ENST00000451823 572 ntBASIC4.72□□□□□ -1.65
DDX1Q92499 MTND3P16-201ENST00000452205 344 ntBASIC4.72□□□□□ -1.65
DDX1Q92499 RNU7-63P-201ENST00000459054 62 ntBASIC4.72□□□□□ -1.65
DDX1Q92499 AC012158.1-204ENST00000483430 465 ntBASIC4.72□□□□□ -1.65
DDX1Q92499 MTCO1P29-201ENST00000496868 288 ntBASIC4.72□□□□□ -1.65
DDX1Q92499 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.72□□□□□ -1.65
DDX1Q92499 PTP4A1P4-201ENST00000512479 322 ntBASIC4.72□□□□□ -1.65
DDX1Q92499 RNA5SP360-201ENST00000516555 118 ntBASIC4.72□□□□□ -1.65
DDX1Q92499 SNORA67.7-201ENST00000516664 135 ntBASIC4.72□□□□□ -1.65
DDX1Q92499 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4.72□□□□□ -1.65
DDX1Q92499 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC4.72□□□□□ -1.65
DDX1Q92499 MRPL49P2-201ENST00000521066 465 ntBASIC4.72□□□□□ -1.65
DDX1Q92499 AC100870.1-201ENST00000522035 505 ntBASIC4.72□□□□□ -1.65
DDX1Q92499 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC4.72□□□□□ -1.65
DDX1Q92499 AP003122.3-201ENST00000526316 255 ntBASIC4.72□□□□□ -1.65
DDX1Q92499 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC4.72□□□□□ -1.65
DDX1Q92499 MIR3158-1-201ENST00000583596 81 ntBASIC4.72□□□□□ -1.65
DDX1Q92499 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.72□□□□□ -1.65
DDX1Q92499 MIR3138-201ENST00000585238 82 ntBASIC4.72□□□□□ -1.65
DDX1Q92499 AC006130.2-201ENST00000586202 326 ntBASIC4.72□□□□□ -1.65
DDX1Q92499 CTHRC1P1-201ENST00000605383 469 ntBASIC4.72□□□□□ -1.65
DDX1Q92499 AL450472.3-201ENST00000615578 367 ntBASIC4.72□□□□□ -1.65
DDX1Q92499 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.72□□□□□ -1.65
DDX1Q92499 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
DDX1Q92499 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
DDX1Q92499 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.72□□□□□ -1.65
DDX1Q92499 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
DDX1Q92499 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
DDX1Q92499 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.72□□□□□ -1.65
DDX1Q92499 AL592182.3-201ENST00000642132 3304 ntBASIC4.72□□□□□ -1.65
DDX1Q92499 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
DDX1Q92499 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
DDX1Q92499 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
DDX1Q92499 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.71□□□□□ -1.66
DDX1Q92499 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
DDX1Q92499 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.71□□□□□ -1.66
DDX1Q92499 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC4.71□□□□□ -1.66
DDX1Q92499 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
DDX1Q92499 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.71□□□□□ -1.66
DDX1Q92499 Y_RNA.100-201ENST00000363141 102 ntBASIC4.71□□□□□ -1.66
DDX1Q92499 Y_RNA.112-201ENST00000363250 102 ntBASIC4.71□□□□□ -1.66
DDX1Q92499 RNU6-996P-201ENST00000365438 107 ntBASIC4.71□□□□□ -1.66
DDX1Q92499 SNORA70.4-201ENST00000365509 134 ntBASIC4.71□□□□□ -1.66
DDX1Q92499 RNU4-20P-201ENST00000365601 151 ntBASIC4.71□□□□□ -1.66
DDX1Q92499 RNU6-1074P-201ENST00000383995 104 ntBASIC4.71□□□□□ -1.66
DDX1Q92499 MIR554-201ENST00000384874 96 ntBASIC4.71□□□□□ -1.66
DDX1Q92499 AL583835.1-201ENST00000399570 407 ntBASIC4.71□□□□□ -1.66
DDX1Q92499 AL136372.1-201ENST00000403060 228 ntBASIC4.71□□□□□ -1.66
DDX1Q92499 RN7SKP202-201ENST00000410439 330 ntBASIC4.71□□□□□ -1.66
DDX1Q92499 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.71□□□□□ -1.66
DDX1Q92499 CBX3P6-201ENST00000430257 527 ntBASIC4.71□□□□□ -1.66
DDX1Q92499 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms