Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 AC138393.1-203ENST00000327086 343 ntBASIC4.58□□□□□ -1.68
RNF111Q6ZNA4 RNU6-288P-201ENST00000363690 104 ntBASIC4.58□□□□□ -1.68
RNF111Q6ZNA4 RNU6-214P-201ENST00000384130 107 ntBASIC4.58□□□□□ -1.68
RNF111Q6ZNA4 RNU6-847P-201ENST00000411115 108 ntBASIC4.58□□□□□ -1.68
RNF111Q6ZNA4 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.58□□□□□ -1.68
RNF111Q6ZNA4 AL137014.1-201ENST00000420490 1226 ntBASIC4.58□□□□□ -1.68
RNF111Q6ZNA4 AC243428.1-201ENST00000421099 264 ntBASIC4.58□□□□□ -1.68
RNF111Q6ZNA4 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC4.58□□□□□ -1.68
RNF111Q6ZNA4 AL591704.1-201ENST00000432574 275 ntBASIC4.58□□□□□ -1.68
RNF111Q6ZNA4 PSMD10P3-201ENST00000437000 448 ntBASIC4.58□□□□□ -1.68
RNF111Q6ZNA4 RPL12P3-201ENST00000440080 396 ntBASIC4.58□□□□□ -1.68
RNF111Q6ZNA4 RPL23AP33-201ENST00000442301 452 ntBASIC4.58□□□□□ -1.68
RNF111Q6ZNA4 SNORD5.1-201ENST00000458800 75 ntBASIC4.58□□□□□ -1.68
RNF111Q6ZNA4 AC012158.1-204ENST00000483430 465 ntBASIC4.58□□□□□ -1.68
RNF111Q6ZNA4 AC093270.2-201ENST00000486157 792 ntBASIC4.58□□□□□ -1.68
RNF111Q6ZNA4 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC4.58□□□□□ -1.68
RNF111Q6ZNA4 CEACAMP10-202ENST00000495431 496 ntBASIC4.58□□□□□ -1.68
RNF111Q6ZNA4 AC116655.1-201ENST00000508324 901 ntBASIC4.58□□□□□ -1.68
RNF111Q6ZNA4 OR51K1P-201ENST00000510214 950 ntBASIC4.58□□□□□ -1.68
RNF111Q6ZNA4 RNA5SP228-201ENST00000516232 133 ntBASIC4.58□□□□□ -1.68
RNF111Q6ZNA4 RNU6-677P-201ENST00000516914 101 ntBASIC4.58□□□□□ -1.68
RNF111Q6ZNA4 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.58□□□□□ -1.68
RNF111Q6ZNA4 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC4.58□□□□□ -1.68
RNF111Q6ZNA4 GNAI2P1-201ENST00000541815 315 ntBASIC4.58□□□□□ -1.68
RNF111Q6ZNA4 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC4.58□□□□□ -1.68
RNF111Q6ZNA4 FKBP1BP1-201ENST00000553366 325 ntBASIC4.58□□□□□ -1.68
RNF111Q6ZNA4 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC4.58□□□□□ -1.68
RNF111Q6ZNA4 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC4.58□□□□□ -1.68
RNF111Q6ZNA4 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC4.58□□□□□ -1.68
RNF111Q6ZNA4 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC4.58□□□□□ -1.68
RNF111Q6ZNA4 MIR4512-201ENST00000583257 77 ntBASIC4.58□□□□□ -1.68
RNF111Q6ZNA4 MIR4443-201ENST00000585052 53 ntBASIC4.58□□□□□ -1.68
RNF111Q6ZNA4 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.58□□□□□ -1.68
RNF111Q6ZNA4 AC104763.2-201ENST00000604179 382 ntBASIC4.58□□□□□ -1.68
RNF111Q6ZNA4 AC100812.1-201ENST00000607622 580 ntBASIC4.58□□□□□ -1.68
RNF111Q6ZNA4 AL450472.3-201ENST00000615578 367 ntBASIC4.58□□□□□ -1.68
RNF111Q6ZNA4 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
RNF111Q6ZNA4 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
RNF111Q6ZNA4 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
RNF111Q6ZNA4 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
RNF111Q6ZNA4 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
RNF111Q6ZNA4 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
RNF111Q6ZNA4 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.58□□□□□ -1.68
RNF111Q6ZNA4 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
RNF111Q6ZNA4 ANKRD26P2-201ENST00000445530 1710 ntBASIC4.58□□□□□ -1.68
RNF111Q6ZNA4 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
RNF111Q6ZNA4 AL445487.1-201ENST00000415694 1580 ntBASIC4.57□□□□□ -1.68
RNF111Q6ZNA4 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.57□□□□□ -1.68
RNF111Q6ZNA4 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
RNF111Q6ZNA4 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
RNF111Q6ZNA4 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
RNF111Q6ZNA4 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC4.57□□□□□ -1.68
RNF111Q6ZNA4 RNU6-1303P-201ENST00000364841 107 ntBASIC4.57□□□□□ -1.68
RNF111Q6ZNA4 RNU1-115P-201ENST00000365329 160 ntBASIC4.57□□□□□ -1.68
RNF111Q6ZNA4 SNORA51.8-201ENST00000384234 132 ntBASIC4.57□□□□□ -1.68
RNF111Q6ZNA4 Y_RNA.512-201ENST00000384518 102 ntBASIC4.57□□□□□ -1.68
RNF111Q6ZNA4 AL109941.1-201ENST00000401925 229 ntBASIC4.57□□□□□ -1.68
RNF111Q6ZNA4 COX6B1P1-201ENST00000415962 213 ntBASIC4.57□□□□□ -1.68
RNF111Q6ZNA4 SSXP9-201ENST00000417503 292 ntBASIC4.57□□□□□ -1.68
RNF111Q6ZNA4 EIF4EP1-201ENST00000422311 642 ntBASIC4.57□□□□□ -1.68
RNF111Q6ZNA4 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC4.57□□□□□ -1.68
RNF111Q6ZNA4 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC4.57□□□□□ -1.68
RNF111Q6ZNA4 AC097713.2-201ENST00000430199 356 ntBASIC4.57□□□□□ -1.68
RNF111Q6ZNA4 ELOCP18-201ENST00000434209 337 ntBASIC4.57□□□□□ -1.68
RNF111Q6ZNA4 AC004866.2-201ENST00000438285 481 ntBASIC4.57□□□□□ -1.68
RNF111Q6ZNA4 AC084198.1-201ENST00000477747 402 ntBASIC4.57□□□□□ -1.68
RNF111Q6ZNA4 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.57□□□□□ -1.68
RNF111Q6ZNA4 MRPS33P2-201ENST00000507850 322 ntBASIC4.57□□□□□ -1.68
RNF111Q6ZNA4 RNU6-352P-201ENST00000516908 107 ntBASIC4.57□□□□□ -1.68
RNF111Q6ZNA4 Y_RNA.719-201ENST00000517156 106 ntBASIC4.57□□□□□ -1.68
RNF111Q6ZNA4 AC008033.2-201ENST00000542626 177 ntBASIC4.57□□□□□ -1.68
RNF111Q6ZNA4 AC012119.1-201ENST00000603184 222 ntBASIC4.57□□□□□ -1.68
RNF111Q6ZNA4 AC174048.1-201ENST00000603389 144 ntBASIC4.57□□□□□ -1.68
RNF111Q6ZNA4 AC002044.1-201ENST00000606707 158 ntBASIC4.57□□□□□ -1.68
RNF111Q6ZNA4 AC015813.4-201ENST00000610469 179 ntBASIC4.57□□□□□ -1.68
RNF111Q6ZNA4 MIR6130-201ENST00000619419 109 ntBASIC4.57□□□□□ -1.68
RNF111Q6ZNA4 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC4.57□□□□□ -1.68
RNF111Q6ZNA4 MPP6-209ENST00000625307 126 ntTSL 5 BASIC4.57□□□□□ -1.68
RNF111Q6ZNA4 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC4.57□□□□□ -1.68
RNF111Q6ZNA4 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.57□□□□□ -1.68
RNF111Q6ZNA4 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC4.57□□□□□ -1.68
RNF111Q6ZNA4 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
RNF111Q6ZNA4 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
RNF111Q6ZNA4 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
RNF111Q6ZNA4 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
RNF111Q6ZNA4 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
RNF111Q6ZNA4 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
RNF111Q6ZNA4 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC4.57□□□□□ -1.68
RNF111Q6ZNA4 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
RNF111Q6ZNA4 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.57□□□□□ -1.68
RNF111Q6ZNA4 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
RNF111Q6ZNA4 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
RNF111Q6ZNA4 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
RNF111Q6ZNA4 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
RNF111Q6ZNA4 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
RNF111Q6ZNA4 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.56□□□□□ -1.68
RNF111Q6ZNA4 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
RNF111Q6ZNA4 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
RNF111Q6ZNA4 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
RNF111Q6ZNA4 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 130.5 ms