Protein–RNA interactions for Protein: Q6NUP7

PPP4R4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4Q6NUP7 MIR6758-201ENST00000620653 63 ntBASIC4.04□□□□□ -1.76
PPP4R4Q6NUP7 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC4.04□□□□□ -1.76
PPP4R4Q6NUP7 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
PPP4R4Q6NUP7 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
PPP4R4Q6NUP7 HSPA8P1-201ENST00000425843 1833 ntBASIC4.03□□□□□ -1.76
PPP4R4Q6NUP7 AC073343.1-201ENST00000328239 651 ntBASIC4.03□□□□□ -1.76
PPP4R4Q6NUP7 SNORA37-201ENST00000384504 129 ntBASIC4.03□□□□□ -1.76
PPP4R4Q6NUP7 U3.22-201ENST00000391120 215 ntBASIC4.03□□□□□ -1.76
PPP4R4Q6NUP7 MTHFD2P2-201ENST00000407725 247 ntBASIC4.03□□□□□ -1.76
PPP4R4Q6NUP7 RNU2-9P-201ENST00000410194 145 ntBASIC4.03□□□□□ -1.76
PPP4R4Q6NUP7 RHEBP3-201ENST00000411920 351 ntBASIC4.03□□□□□ -1.76
PPP4R4Q6NUP7 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
PPP4R4Q6NUP7 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
PPP4R4Q6NUP7 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC4.03□□□□□ -1.76
PPP4R4Q6NUP7 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
PPP4R4Q6NUP7 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC4.03□□□□□ -1.76
PPP4R4Q6NUP7 AC011742.1-201ENST00000431448 434 ntBASIC4.03□□□□□ -1.76
PPP4R4Q6NUP7 NEFMP1-201ENST00000443423 1006 ntBASIC4.03□□□□□ -1.76
PPP4R4Q6NUP7 PHBP16-201ENST00000446318 950 ntBASIC4.03□□□□□ -1.76
PPP4R4Q6NUP7 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC4.03□□□□□ -1.76
PPP4R4Q6NUP7 RNU7-170P-201ENST00000459303 61 ntBASIC4.03□□□□□ -1.76
PPP4R4Q6NUP7 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC4.03□□□□□ -1.76
PPP4R4Q6NUP7 AC126389.1-201ENST00000477436 290 ntBASIC4.03□□□□□ -1.76
PPP4R4Q6NUP7 AC126182.1-201ENST00000478134 357 ntBASIC4.03□□□□□ -1.76
PPP4R4Q6NUP7 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC4.03□□□□□ -1.76
PPP4R4Q6NUP7 AC009646.1-201ENST00000510455 318 ntBASIC4.03□□□□□ -1.76
PPP4R4Q6NUP7 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC4.03□□□□□ -1.76
PPP4R4Q6NUP7 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC4.03□□□□□ -1.76
PPP4R4Q6NUP7 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC4.03□□□□□ -1.76
PPP4R4Q6NUP7 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC4.03□□□□□ -1.76
PPP4R4Q6NUP7 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC4.03□□□□□ -1.76
PPP4R4Q6NUP7 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC4.03□□□□□ -1.76
PPP4R4Q6NUP7 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC4.03□□□□□ -1.76
PPP4R4Q6NUP7 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC4.03□□□□□ -1.76
PPP4R4Q6NUP7 MIR4284-201ENST00000578924 81 ntBASIC4.03□□□□□ -1.76
PPP4R4Q6NUP7 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC4.03□□□□□ -1.76
PPP4R4Q6NUP7 AC107304.1-201ENST00000604229 296 ntBASIC4.03□□□□□ -1.76
PPP4R4Q6NUP7 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.03□□□□□ -1.76
PPP4R4Q6NUP7 AP001330.5-201ENST00000607176 411 ntBASIC4.03□□□□□ -1.76
PPP4R4Q6NUP7 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC4.03□□□□□ -1.76
PPP4R4Q6NUP7 MIR7702-201ENST00000621931 59 ntBASIC4.03□□□□□ -1.76
PPP4R4Q6NUP7 AC007998.5-201ENST00000622938 237 ntBASIC4.03□□□□□ -1.76
PPP4R4Q6NUP7 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC4.03□□□□□ -1.76
PPP4R4Q6NUP7 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.03□□□□□ -1.76
PPP4R4Q6NUP7 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
PPP4R4Q6NUP7 ZNF680P1-201ENST00000436625 1469 ntBASIC4.03□□□□□ -1.76
PPP4R4Q6NUP7 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
PPP4R4Q6NUP7 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
PPP4R4Q6NUP7 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
PPP4R4Q6NUP7 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC4.03□□□□□ -1.77
PPP4R4Q6NUP7 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.02□□□□□ -1.77
PPP4R4Q6NUP7 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
PPP4R4Q6NUP7 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
PPP4R4Q6NUP7 MIR423-201ENST00000362201 94 ntBASIC4.02□□□□□ -1.77
PPP4R4Q6NUP7 RNU6-1120P-201ENST00000362988 108 ntBASIC4.02□□□□□ -1.77
PPP4R4Q6NUP7 RNU6-1167P-201ENST00000363227 94 ntBASIC4.02□□□□□ -1.77
PPP4R4Q6NUP7 RNU6-61P-201ENST00000365528 109 ntBASIC4.02□□□□□ -1.77
PPP4R4Q6NUP7 Y_RNA.381-201ENST00000365666 102 ntBASIC4.02□□□□□ -1.77
PPP4R4Q6NUP7 RNU6-641P-201ENST00000384006 107 ntBASIC4.02□□□□□ -1.77
PPP4R4Q6NUP7 MIR181A1-201ENST00000385026 110 ntBASIC4.02□□□□□ -1.77
PPP4R4Q6NUP7 RNU6-817P-201ENST00000391083 104 ntBASIC4.02□□□□□ -1.77
PPP4R4Q6NUP7 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC4.02□□□□□ -1.77
PPP4R4Q6NUP7 FCF1P9-201ENST00000412546 282 ntBASIC4.02□□□□□ -1.77
PPP4R4Q6NUP7 HSPE1P12-201ENST00000412576 301 ntBASIC4.02□□□□□ -1.77
PPP4R4Q6NUP7 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC4.02□□□□□ -1.77
PPP4R4Q6NUP7 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC4.02□□□□□ -1.77
PPP4R4Q6NUP7 NEK4P1-201ENST00000433383 879 ntBASIC4.02□□□□□ -1.77
PPP4R4Q6NUP7 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.02□□□□□ -1.77
PPP4R4Q6NUP7 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC4.02□□□□□ -1.77
PPP4R4Q6NUP7 AC003071.1-201ENST00000451219 789 ntBASIC4.02□□□□□ -1.77
PPP4R4Q6NUP7 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.02□□□□□ -1.77
PPP4R4Q6NUP7 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC4.02□□□□□ -1.77
PPP4R4Q6NUP7 AC010099.1-201ENST00000455434 375 ntBASIC4.02□□□□□ -1.77
PPP4R4Q6NUP7 RPL23AP24-201ENST00000458203 385 ntBASIC4.02□□□□□ -1.77
PPP4R4Q6NUP7 MRPS17P3-201ENST00000465453 385 ntBASIC4.02□□□□□ -1.77
PPP4R4Q6NUP7 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.02□□□□□ -1.77
PPP4R4Q6NUP7 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
PPP4R4Q6NUP7 MTND4LP31-201ENST00000514859 294 ntBASIC4.02□□□□□ -1.77
PPP4R4Q6NUP7 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC4.02□□□□□ -1.77
PPP4R4Q6NUP7 RNU6-314P-201ENST00000516574 104 ntBASIC4.02□□□□□ -1.77
PPP4R4Q6NUP7 SNORD59.2-201ENST00000516873 68 ntBASIC4.02□□□□□ -1.77
PPP4R4Q6NUP7 AP003034.1-201ENST00000534621 422 ntBASIC4.02□□□□□ -1.77
PPP4R4Q6NUP7 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC4.02□□□□□ -1.77
PPP4R4Q6NUP7 AC098826.3-201ENST00000603823 466 ntBASIC4.02□□□□□ -1.77
PPP4R4Q6NUP7 ARF4P1-201ENST00000605447 541 ntBASIC4.02□□□□□ -1.77
PPP4R4Q6NUP7 AC012409.3-201ENST00000611343 981 ntBASIC4.02□□□□□ -1.77
PPP4R4Q6NUP7 AL365204.3-201ENST00000612448 685 ntBASIC4.02□□□□□ -1.77
PPP4R4Q6NUP7 U4.5-201ENST00000617137 123 ntBASIC4.02□□□□□ -1.77
PPP4R4Q6NUP7 AC139792.3-201ENST00000623525 224 ntBASIC4.02□□□□□ -1.77
PPP4R4Q6NUP7 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC4.02□□□□□ -1.77
PPP4R4Q6NUP7 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
PPP4R4Q6NUP7 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC4.02□□□□□ -1.77
PPP4R4Q6NUP7 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
PPP4R4Q6NUP7 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC4.02□□□□□ -1.77
PPP4R4Q6NUP7 MFSD8-216ENST00000641147 4009 ntBASIC4.01□□□□□ -1.77
PPP4R4Q6NUP7 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
PPP4R4Q6NUP7 MAPK10-373ENST00000641983 6772 ntBASIC4.01□□□□□ -1.77
PPP4R4Q6NUP7 SNORA14A-201ENST00000364773 135 ntBASIC4.01□□□□□ -1.77
PPP4R4Q6NUP7 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
PPP4R4Q6NUP7 RNA5SP252-201ENST00000391131 119 ntBASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 227.4 ms