Protein–RNA interactions for Protein: Q2M329

CCDC96, Coiled-coil domain-containing protein 96, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC96Q2M329 RNA5SP216-201ENST00000516111 123 ntBASIC3.79□□□□□ -1.8
CCDC96Q2M329 MIR2276-201ENST00000516886 89 ntBASIC3.79□□□□□ -1.8
CCDC96Q2M329 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.79□□□□□ -1.8
CCDC96Q2M329 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.79□□□□□ -1.8
CCDC96Q2M329 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC3.79□□□□□ -1.8
CCDC96Q2M329 AC024909.2-201ENST00000553035 286 ntBASIC3.79□□□□□ -1.8
CCDC96Q2M329 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC3.79□□□□□ -1.8
CCDC96Q2M329 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC3.79□□□□□ -1.8
CCDC96Q2M329 AC010653.1-201ENST00000571108 881 ntBASIC3.79□□□□□ -1.8
CCDC96Q2M329 ROCK1P1-201ENST00000573767 549 ntBASIC3.79□□□□□ -1.8
CCDC96Q2M329 MIR5004-201ENST00000579078 107 ntBASIC3.79□□□□□ -1.8
CCDC96Q2M329 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC3.79□□□□□ -1.8
CCDC96Q2M329 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CCDC96Q2M329 MTCYBP22-201ENST00000603788 447 ntBASIC3.79□□□□□ -1.8
CCDC96Q2M329 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CCDC96Q2M329 AC092354.1-201ENST00000606057 376 ntBASIC3.79□□□□□ -1.8
CCDC96Q2M329 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
CCDC96Q2M329 AL590099.1-201ENST00000615276 138 ntBASIC3.79□□□□□ -1.8
CCDC96Q2M329 AL158063.1-201ENST00000615349 536 ntBASIC3.79□□□□□ -1.8
CCDC96Q2M329 MIR6130-201ENST00000619419 109 ntBASIC3.79□□□□□ -1.8
CCDC96Q2M329 AC092192.1-201ENST00000633154 1018 ntBASIC3.79□□□□□ -1.8
CCDC96Q2M329 MIR4275-201ENST00000636486 87 ntBASIC3.79□□□□□ -1.8
CCDC96Q2M329 AC006927.3-201ENST00000638789 384 ntBASIC3.79□□□□□ -1.8
CCDC96Q2M329 ANKRD62P1-201ENST00000434304 1623 ntBASIC3.79□□□□□ -1.8
CCDC96Q2M329 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CCDC96Q2M329 MAPK10-322ENST00000641485 4530 ntBASIC3.78□□□□□ -1.8
CCDC96Q2M329 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CCDC96Q2M329 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.78□□□□□ -1.8
CCDC96Q2M329 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CCDC96Q2M329 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.78□□□□□ -1.8
CCDC96Q2M329 RNU6-525P-201ENST00000363685 104 ntBASIC3.78□□□□□ -1.8
CCDC96Q2M329 RNU6-660P-201ENST00000364566 109 ntBASIC3.78□□□□□ -1.8
CCDC96Q2M329 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CCDC96Q2M329 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CCDC96Q2M329 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
CCDC96Q2M329 RNU4-47P-201ENST00000410876 114 ntBASIC3.78□□□□□ -1.8
CCDC96Q2M329 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC3.78□□□□□ -1.8
CCDC96Q2M329 AC010153.1-201ENST00000432862 727 ntBASIC3.78□□□□□ -1.8
CCDC96Q2M329 MTCO3P5-201ENST00000433620 714 ntBASIC3.78□□□□□ -1.8
CCDC96Q2M329 BX679664.1-201ENST00000434429 253 ntBASIC3.78□□□□□ -1.8
CCDC96Q2M329 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC3.78□□□□□ -1.8
CCDC96Q2M329 AC092798.1-201ENST00000458542 409 ntBASIC3.78□□□□□ -1.8
CCDC96Q2M329 RN7SL863P-201ENST00000462370 296 ntBASIC3.78□□□□□ -1.8
CCDC96Q2M329 RPL30P9-201ENST00000465586 330 ntBASIC3.78□□□□□ -1.8
CCDC96Q2M329 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CCDC96Q2M329 RPL31P60-201ENST00000478450 367 ntBASIC3.78□□□□□ -1.8
CCDC96Q2M329 ARL4AP2-201ENST00000507378 601 ntBASIC3.78□□□□□ -1.8
CCDC96Q2M329 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC3.78□□□□□ -1.8
CCDC96Q2M329 RNA5SP380-201ENST00000517190 98 ntBASIC3.78□□□□□ -1.8
CCDC96Q2M329 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CCDC96Q2M329 OR6C7P-201ENST00000547875 934 ntBASIC3.78□□□□□ -1.8
CCDC96Q2M329 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.78□□□□□ -1.8
CCDC96Q2M329 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.78□□□□□ -1.8
CCDC96Q2M329 MIR3609-201ENST00000582661 80 ntBASIC3.78□□□□□ -1.8
CCDC96Q2M329 RNU6-88P-201ENST00000606801 100 ntBASIC3.78□□□□□ -1.8
CCDC96Q2M329 AC073114.1-201ENST00000612027 490 ntBASIC3.78□□□□□ -1.8
CCDC96Q2M329 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
CCDC96Q2M329 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
CCDC96Q2M329 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
CCDC96Q2M329 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CCDC96Q2M329 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.81
CCDC96Q2M329 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.77□□□□□ -1.81
CCDC96Q2M329 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.77□□□□□ -1.81
CCDC96Q2M329 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.77□□□□□ -1.81
CCDC96Q2M329 ATP8A2P3-201ENST00000426792 1536 ntBASIC3.77□□□□□ -1.81
CCDC96Q2M329 RNU5A-1-201ENST00000362698 116 ntBASIC3.77□□□□□ -1.81
CCDC96Q2M329 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC3.77□□□□□ -1.81
CCDC96Q2M329 CD24P4-201ENST00000382840 243 ntBASIC3.77□□□□□ -1.81
CCDC96Q2M329 SNORD116-4-201ENST00000384733 96 ntBASIC3.77□□□□□ -1.81
CCDC96Q2M329 RPL7P8-201ENST00000411964 730 ntBASIC3.77□□□□□ -1.81
CCDC96Q2M329 NDUFB4P5-201ENST00000415445 361 ntBASIC3.77□□□□□ -1.81
CCDC96Q2M329 AL360221.1-201ENST00000445989 335 ntBASIC3.77□□□□□ -1.81
CCDC96Q2M329 KATNBL1P6-201ENST00000453433 915 ntBASIC3.77□□□□□ -1.81
CCDC96Q2M329 AL031183.1-201ENST00000457667 207 ntBASIC3.77□□□□□ -1.81
CCDC96Q2M329 RPS29P12-201ENST00000460178 152 ntBASIC3.77□□□□□ -1.81
CCDC96Q2M329 AC109925.1-201ENST00000478069 331 ntBASIC3.77□□□□□ -1.81
CCDC96Q2M329 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.77□□□□□ -1.81
CCDC96Q2M329 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.77□□□□□ -1.81
CCDC96Q2M329 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC3.77□□□□□ -1.81
CCDC96Q2M329 AC006445.2-201ENST00000510061 472 ntBASIC3.77□□□□□ -1.81
CCDC96Q2M329 MTND5P13-201ENST00000513046 1079 ntBASIC3.77□□□□□ -1.81
CCDC96Q2M329 MTCYBP43-201ENST00000513621 740 ntBASIC3.77□□□□□ -1.81
CCDC96Q2M329 AC026801.2-201ENST00000515352 425 ntBASIC3.77□□□□□ -1.81
CCDC96Q2M329 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC3.77□□□□□ -1.81
CCDC96Q2M329 AC004024.1-201ENST00000549244 247 ntBASIC3.77□□□□□ -1.81
CCDC96Q2M329 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.77□□□□□ -1.81
CCDC96Q2M329 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.77□□□□□ -1.81
CCDC96Q2M329 RPL23AP78-201ENST00000599928 470 ntBASIC3.77□□□□□ -1.81
CCDC96Q2M329 AC012557.2-201ENST00000605919 418 ntBASIC3.77□□□□□ -1.81
CCDC96Q2M329 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC3.77□□□□□ -1.81
CCDC96Q2M329 AL451064.1-201ENST00000607718 471 ntBASIC3.77□□□□□ -1.81
CCDC96Q2M329 AC027309.3-201ENST00000623419 351 ntBASIC3.77□□□□□ -1.81
CCDC96Q2M329 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CCDC96Q2M329 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.77□□□□□ -1.81
CCDC96Q2M329 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CCDC96Q2M329 AC091564.4-201ENST00000533934 2194 ntBASIC3.76□□□□□ -1.81
CCDC96Q2M329 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC3.76□□□□□ -1.81
CCDC96Q2M329 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC3.76□□□□□ -1.81
CCDC96Q2M329 RNU6-723P-201ENST00000383973 107 ntBASIC3.76□□□□□ -1.81
CCDC96Q2M329 Y_RNA.436-201ENST00000384097 102 ntBASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 167.9 ms