Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC2.93□□□□□ -1.94
LMO4P61968 AC009268.2-201ENST00000621925 457 ntBASIC2.93□□□□□ -1.94
LMO4P61968 MIR4727-201ENST00000622232 55 ntBASIC2.93□□□□□ -1.94
LMO4P61968 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC2.93□□□□□ -1.94
LMO4P61968 MIR1321-201ENST00000637766 79 ntBASIC2.93□□□□□ -1.94
LMO4P61968 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
LMO4P61968 AC007656.2-201ENST00000624902 4547 ntBASIC2.93□□□□□ -1.94
LMO4P61968 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
LMO4P61968 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
LMO4P61968 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
LMO4P61968 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
LMO4P61968 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC2.92□□□□□ -1.94
LMO4P61968 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC2.92□□□□□ -1.94
LMO4P61968 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC2.92□□□□□ -1.94
LMO4P61968 GABPAP-201ENST00000419271 1356 ntBASIC2.92□□□□□ -1.94
LMO4P61968 AC138915.3-201ENST00000562908 1389 ntBASIC2.92□□□□□ -1.94
LMO4P61968 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
LMO4P61968 GNG5P1-201ENST00000255500 204 ntBASIC2.92□□□□□ -1.94
LMO4P61968 RPL23AP57-201ENST00000332361 466 ntBASIC2.92□□□□□ -1.94
LMO4P61968 Y_RNA.160-201ENST00000363677 92 ntBASIC2.92□□□□□ -1.94
LMO4P61968 CRP-202ENST00000368110 667 ntTSL 3 BASIC2.92□□□□□ -1.94
LMO4P61968 MIR491-201ENST00000384877 84 ntBASIC2.92□□□□□ -1.94
LMO4P61968 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
LMO4P61968 RNU6-1009P-201ENST00000390996 107 ntBASIC2.92□□□□□ -1.94
LMO4P61968 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
LMO4P61968 RPS20P2-201ENST00000402520 389 ntBASIC2.92□□□□□ -1.94
LMO4P61968 HSPE1P26-201ENST00000405341 275 ntBASIC2.92□□□□□ -1.94
LMO4P61968 HSPE1P8-201ENST00000406997 288 ntBASIC2.92□□□□□ -1.94
LMO4P61968 RNU6-712P-201ENST00000410558 100 ntBASIC2.92□□□□□ -1.94
LMO4P61968 RN7SKP53-201ENST00000411337 315 ntBASIC2.92□□□□□ -1.94
LMO4P61968 RNU2-71P-201ENST00000411395 189 ntBASIC2.92□□□□□ -1.94
LMO4P61968 AMD1P2-201ENST00000412936 992 ntBASIC2.92□□□□□ -1.94
LMO4P61968 TPMTP2-201ENST00000414372 726 ntBASIC2.92□□□□□ -1.94
LMO4P61968 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC2.92□□□□□ -1.94
LMO4P61968 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC2.92□□□□□ -1.94
LMO4P61968 AC004552.1-201ENST00000419089 348 ntBASIC2.92□□□□□ -1.94
LMO4P61968 PIGFP2-201ENST00000421400 651 ntBASIC2.92□□□□□ -1.94
LMO4P61968 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC2.92□□□□□ -1.94
LMO4P61968 FCF1P1-201ENST00000432690 571 ntBASIC2.92□□□□□ -1.94
LMO4P61968 AC002486.1-201ENST00000435098 391 ntBASIC2.92□□□□□ -1.94
LMO4P61968 AC005019.1-201ENST00000436455 431 ntBASIC2.92□□□□□ -1.94
LMO4P61968 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
LMO4P61968 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC2.92□□□□□ -1.94
LMO4P61968 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC2.92□□□□□ -1.94
LMO4P61968 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.92□□□□□ -1.94
LMO4P61968 RPL17P49-201ENST00000443728 411 ntBASIC2.92□□□□□ -1.94
LMO4P61968 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC2.92□□□□□ -1.94
LMO4P61968 AP000542.1-201ENST00000448473 371 ntBASIC2.92□□□□□ -1.94
LMO4P61968 HMGB3P22-202ENST00000451823 572 ntBASIC2.92□□□□□ -1.94
LMO4P61968 RPS24P6-201ENST00000452670 400 ntBASIC2.92□□□□□ -1.94
LMO4P61968 RPS26P3-201ENST00000470205 348 ntBASIC2.92□□□□□ -1.94
LMO4P61968 RPL31P50-201ENST00000471002 296 ntBASIC2.92□□□□□ -1.94
LMO4P61968 RN7SL601P-201ENST00000471221 293 ntBASIC2.92□□□□□ -1.94
LMO4P61968 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC2.92□□□□□ -1.94
LMO4P61968 AC090543.2-201ENST00000483963 348 ntBASIC2.92□□□□□ -1.94
LMO4P61968 AC004057.1-201ENST00000485827 348 ntBASIC2.92□□□□□ -1.94
LMO4P61968 RPS26P15-201ENST00000488067 348 ntBASIC2.92□□□□□ -1.94
LMO4P61968 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.92□□□□□ -1.94
LMO4P61968 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC2.92□□□□□ -1.94
LMO4P61968 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC2.92□□□□□ -1.94
LMO4P61968 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC2.92□□□□□ -1.94
LMO4P61968 AC025465.4-201ENST00000513422 638 ntBASIC2.92□□□□□ -1.94
LMO4P61968 Y_RNA.693-201ENST00000516641 110 ntBASIC2.92□□□□□ -1.94
LMO4P61968 RNU6-1003P-201ENST00000517099 105 ntBASIC2.92□□□□□ -1.94
LMO4P61968 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC2.92□□□□□ -1.94
LMO4P61968 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC2.92□□□□□ -1.94
LMO4P61968 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC2.92□□□□□ -1.94
LMO4P61968 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC2.92□□□□□ -1.94
LMO4P61968 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC2.92□□□□□ -1.94
LMO4P61968 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC2.92□□□□□ -1.94
LMO4P61968 HSPE1P3-201ENST00000559254 309 ntBASIC2.92□□□□□ -1.94
LMO4P61968 MIR3200-201ENST00000580767 85 ntBASIC2.92□□□□□ -1.94
LMO4P61968 UBE2V2P2-201ENST00000587677 504 ntBASIC2.92□□□□□ -1.94
LMO4P61968 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC2.92□□□□□ -1.94
LMO4P61968 CKS1BP3-201ENST00000600888 237 ntBASIC2.92□□□□□ -1.94
LMO4P61968 AC245014.2-201ENST00000603689 287 ntBASIC2.92□□□□□ -1.94
LMO4P61968 AL359999.1-201ENST00000604513 294 ntBASIC2.92□□□□□ -1.94
LMO4P61968 AC246785.4-201ENST00000605374 287 ntBASIC2.92□□□□□ -1.94
LMO4P61968 AL121757.2-201ENST00000611223 313 ntBASIC2.92□□□□□ -1.94
LMO4P61968 AC091953.5-201ENST00000622919 233 ntBASIC2.92□□□□□ -1.94
LMO4P61968 AP003122.6-201ENST00000623831 495 ntBASIC2.92□□□□□ -1.94
LMO4P61968 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC2.92□□□□□ -1.94
LMO4P61968 CCT4P2-201ENST00000233836 1548 ntBASIC2.92□□□□□ -1.94
LMO4P61968 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
LMO4P61968 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC2.92□□□□□ -1.94
LMO4P61968 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC2.92□□□□□ -1.94
LMO4P61968 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
LMO4P61968 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC2.91□□□□□ -1.94
LMO4P61968 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC2.91□□□□□ -1.94
LMO4P61968 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
LMO4P61968 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC2.91□□□□□ -1.94
LMO4P61968 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
LMO4P61968 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
LMO4P61968 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
LMO4P61968 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
LMO4P61968 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
LMO4P61968 FRG1CP-201ENST00000358464 769 ntBASIC2.91□□□□□ -1.94
LMO4P61968 RNU6-1085P-201ENST00000363576 107 ntBASIC2.91□□□□□ -1.94
LMO4P61968 RNU6-343P-201ENST00000364709 104 ntBASIC2.91□□□□□ -1.94
LMO4P61968 RNU6-483P-201ENST00000384088 108 ntBASIC2.91□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 10.5 ms