Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 HSPE1P6-201ENST00000479457 291 ntBASIC3.34□□□□□ -1.87
CLK1P49759 AC020893.1-201ENST00000502452 580 ntBASIC3.34□□□□□ -1.87
CLK1P49759 ARL2BPP4-201ENST00000506854 471 ntBASIC3.34□□□□□ -1.87
CLK1P49759 AC006499.2-201ENST00000513470 337 ntBASIC3.34□□□□□ -1.87
CLK1P49759 RNU6-1282P-201ENST00000516735 96 ntBASIC3.34□□□□□ -1.87
CLK1P49759 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CLK1P49759 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC3.34□□□□□ -1.87
CLK1P49759 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC3.34□□□□□ -1.87
CLK1P49759 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC3.34□□□□□ -1.87
CLK1P49759 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.34□□□□□ -1.87
CLK1P49759 AMZ2P1-203ENST00000565833 850 ntBASIC3.34□□□□□ -1.87
CLK1P49759 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC3.34□□□□□ -1.87
CLK1P49759 AP001004.1-201ENST00000582468 324 ntBASIC3.34□□□□□ -1.87
CLK1P49759 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.34□□□□□ -1.87
CLK1P49759 ABBA01006766.1-201ENST00000584728 294 ntBASIC3.34□□□□□ -1.87
CLK1P49759 AC011451.2-201ENST00000604303 598 ntBASIC3.34□□□□□ -1.87
CLK1P49759 AC107214.2-201ENST00000608204 634 ntBASIC3.34□□□□□ -1.87
CLK1P49759 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.34□□□□□ -1.87
CLK1P49759 AL596245.1-201ENST00000618994 362 ntBASIC3.34□□□□□ -1.87
CLK1P49759 AL159972.1-201ENST00000625150 448 ntBASIC3.34□□□□□ -1.87
CLK1P49759 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC3.34□□□□□ -1.87
CLK1P49759 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
CLK1P49759 AC022336.2-201ENST00000568966 2538 ntBASIC3.34□□□□□ -1.88
CLK1P49759 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
CLK1P49759 AL079343.1-201ENST00000572358 1771 ntBASIC3.33□□□□□ -1.88
CLK1P49759 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
CLK1P49759 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
CLK1P49759 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CLK1P49759 RNU6-501P-201ENST00000364072 100 ntBASIC3.33□□□□□ -1.88
CLK1P49759 U8.9-201ENST00000365667 134 ntBASIC3.33□□□□□ -1.88
CLK1P49759 RNU6-723P-201ENST00000383973 107 ntBASIC3.33□□□□□ -1.88
CLK1P49759 RNU6-76P-201ENST00000384060 104 ntBASIC3.33□□□□□ -1.88
CLK1P49759 RNU6-348P-201ENST00000384386 107 ntBASIC3.33□□□□□ -1.88
CLK1P49759 RNU6-1122P-201ENST00000384449 107 ntBASIC3.33□□□□□ -1.88
CLK1P49759 RNU6-1035P-201ENST00000384477 107 ntBASIC3.33□□□□□ -1.88
CLK1P49759 RNU2-66P-201ENST00000410650 161 ntBASIC3.33□□□□□ -1.88
CLK1P49759 RNU2-25P-201ENST00000411041 191 ntBASIC3.33□□□□□ -1.88
CLK1P49759 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC3.33□□□□□ -1.88
CLK1P49759 AC010975.2-201ENST00000427781 588 ntBASIC3.33□□□□□ -1.88
CLK1P49759 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC3.33□□□□□ -1.88
CLK1P49759 AL512844.2-201ENST00000433990 593 ntBASIC3.33□□□□□ -1.88
CLK1P49759 BX679664.1-201ENST00000434429 253 ntBASIC3.33□□□□□ -1.88
CLK1P49759 NDUFB1P1-201ENST00000435191 180 ntBASIC3.33□□□□□ -1.88
CLK1P49759 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC3.33□□□□□ -1.88
CLK1P49759 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.33□□□□□ -1.88
CLK1P49759 RPS3AP46-201ENST00000448352 682 ntBASIC3.33□□□□□ -1.88
CLK1P49759 AC010655.1-201ENST00000449336 292 ntBASIC3.33□□□□□ -1.88
CLK1P49759 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC3.33□□□□□ -1.88
CLK1P49759 RPL7P15-201ENST00000461190 712 ntBASIC3.33□□□□□ -1.88
CLK1P49759 AC091564.1-201ENST00000464563 479 ntBASIC3.33□□□□□ -1.88
CLK1P49759 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.33□□□□□ -1.88
CLK1P49759 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
CLK1P49759 HSPD1P15-201ENST00000505573 1122 ntBASIC3.33□□□□□ -1.88
CLK1P49759 RPL37P25-201ENST00000507308 276 ntBASIC3.33□□□□□ -1.88
CLK1P49759 CDC42P4-201ENST00000510507 563 ntBASIC3.33□□□□□ -1.88
CLK1P49759 AC026402.1-201ENST00000513642 170 ntBASIC3.33□□□□□ -1.88
CLK1P49759 RNU6-579P-201ENST00000516879 102 ntBASIC3.33□□□□□ -1.88
CLK1P49759 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC3.33□□□□□ -1.88
CLK1P49759 HSPE1P20-201ENST00000538133 289 ntBASIC3.33□□□□□ -1.88
CLK1P49759 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC3.33□□□□□ -1.88
CLK1P49759 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.33□□□□□ -1.88
CLK1P49759 PCMTD1P2-201ENST00000565017 355 ntBASIC3.33□□□□□ -1.88
CLK1P49759 MTATP6P3-201ENST00000581686 676 ntBASIC3.33□□□□□ -1.88
CLK1P49759 MIR4506-201ENST00000584693 77 ntBASIC3.33□□□□□ -1.88
CLK1P49759 MIR548AB-201ENST00000584917 84 ntBASIC3.33□□□□□ -1.88
CLK1P49759 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC3.33□□□□□ -1.88
CLK1P49759 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.33□□□□□ -1.88
CLK1P49759 NDUFA8P1-201ENST00000605525 367 ntBASIC3.33□□□□□ -1.88
CLK1P49759 AL732618.1-201ENST00000623251 301 ntBASIC3.33□□□□□ -1.88
CLK1P49759 AL356596.1-201ENST00000624230 379 ntBASIC3.33□□□□□ -1.88
CLK1P49759 AL732372.2-225ENST00000642124 456 ntBASIC3.33□□□□□ -1.88
CLK1P49759 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CLK1P49759 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
CLK1P49759 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CLK1P49759 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.33□□□□□ -1.88
CLK1P49759 AC007656.2-201ENST00000624902 4547 ntBASIC3.32□□□□□ -1.88
CLK1P49759 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CLK1P49759 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CLK1P49759 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CLK1P49759 MIR30E-201ENST00000362104 92 ntBASIC3.32□□□□□ -1.88
CLK1P49759 RNU5F-6P-201ENST00000362979 116 ntBASIC3.32□□□□□ -1.88
CLK1P49759 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
CLK1P49759 AL356967.1-201ENST00000406305 431 ntBASIC3.32□□□□□ -1.88
CLK1P49759 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC3.32□□□□□ -1.88
CLK1P49759 AC009969.1-201ENST00000438726 172 ntBASIC3.32□□□□□ -1.88
CLK1P49759 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC3.32□□□□□ -1.88
CLK1P49759 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC3.32□□□□□ -1.88
CLK1P49759 SSXP1-201ENST00000453640 473 ntBASIC3.32□□□□□ -1.88
CLK1P49759 RPL27AP5-201ENST00000469428 449 ntBASIC3.32□□□□□ -1.88
CLK1P49759 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC3.32□□□□□ -1.88
CLK1P49759 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC3.32□□□□□ -1.88
CLK1P49759 HMGN1P11-201ENST00000508668 303 ntBASIC3.32□□□□□ -1.88
CLK1P49759 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.32□□□□□ -1.88
CLK1P49759 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.32□□□□□ -1.88
CLK1P49759 DUXAP2-201ENST00000519198 589 ntBASIC3.32□□□□□ -1.88
CLK1P49759 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.32□□□□□ -1.88
CLK1P49759 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.32□□□□□ -1.88
CLK1P49759 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.32□□□□□ -1.88
CLK1P49759 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.32□□□□□ -1.88
CLK1P49759 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms