Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC5.09□□□□□ -1.59
CHRNA4P43681 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.09□□□□□ -1.59
CHRNA4P43681 MIR5701-3-201ENST00000578890 82 ntBASIC5.09□□□□□ -1.59
CHRNA4P43681 MIR5701-1-201ENST00000585138 82 ntBASIC5.09□□□□□ -1.59
CHRNA4P43681 VN1R84P-201ENST00000593697 235 ntBASIC5.09□□□□□ -1.59
CHRNA4P43681 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC5.09□□□□□ -1.59
CHRNA4P43681 MIR5701-2-201ENST00000615634 82 ntBASIC5.09□□□□□ -1.59
CHRNA4P43681 MIR6719-201ENST00000622428 87 ntBASIC5.09□□□□□ -1.59
CHRNA4P43681 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CHRNA4P43681 AL109809.4-201ENST00000603520 2185 ntBASIC5.09□□□□□ -1.59
CHRNA4P43681 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.09□□□□□ -1.6
CHRNA4P43681 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.09□□□□□ -1.6
CHRNA4P43681 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC5.09□□□□□ -1.6
CHRNA4P43681 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
CHRNA4P43681 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.6
CHRNA4P43681 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
CHRNA4P43681 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
CHRNA4P43681 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
CHRNA4P43681 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC5.08□□□□□ -1.6
CHRNA4P43681 SNORA70.10-201ENST00000384515 134 ntBASIC5.08□□□□□ -1.6
CHRNA4P43681 Y_RNA.580-201ENST00000391004 95 ntBASIC5.08□□□□□ -1.6
CHRNA4P43681 AC013442.1-201ENST00000397347 228 ntBASIC5.08□□□□□ -1.6
CHRNA4P43681 U3.42-201ENST00000408746 214 ntBASIC5.08□□□□□ -1.6
CHRNA4P43681 AC092162.1-201ENST00000432828 434 ntBASIC5.08□□□□□ -1.6
CHRNA4P43681 AC007389.2-201ENST00000434630 306 ntBASIC5.08□□□□□ -1.6
CHRNA4P43681 AL450023.3-201ENST00000440592 271 ntBASIC5.08□□□□□ -1.6
CHRNA4P43681 AL691482.1-201ENST00000453255 87 ntBASIC5.08□□□□□ -1.6
CHRNA4P43681 RN7SL799P-201ENST00000475891 298 ntBASIC5.08□□□□□ -1.6
CHRNA4P43681 RPL21P103-201ENST00000479921 488 ntBASIC5.08□□□□□ -1.6
CHRNA4P43681 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC5.08□□□□□ -1.6
CHRNA4P43681 ENPP7P11-201ENST00000505915 627 ntBASIC5.08□□□□□ -1.6
CHRNA4P43681 AC006499.3-201ENST00000506077 748 ntBASIC5.08□□□□□ -1.6
CHRNA4P43681 AC074250.1-201ENST00000511117 192 ntBASIC5.08□□□□□ -1.6
CHRNA4P43681 RNU6-798P-201ENST00000516912 103 ntBASIC5.08□□□□□ -1.6
CHRNA4P43681 RNA5SP170-201ENST00000517150 101 ntBASIC5.08□□□□□ -1.6
CHRNA4P43681 IGHVII-62-1-201ENST00000519283 235 ntBASIC5.08□□□□□ -1.6
CHRNA4P43681 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC5.08□□□□□ -1.6
CHRNA4P43681 AC100870.1-201ENST00000522035 505 ntBASIC5.08□□□□□ -1.6
CHRNA4P43681 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC5.08□□□□□ -1.6
CHRNA4P43681 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC5.08□□□□□ -1.6
CHRNA4P43681 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5.08□□□□□ -1.6
CHRNA4P43681 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.08□□□□□ -1.6
CHRNA4P43681 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC5.08□□□□□ -1.6
CHRNA4P43681 NDUFB4P11-201ENST00000560510 395 ntBASIC5.08□□□□□ -1.6
CHRNA4P43681 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.08□□□□□ -1.6
CHRNA4P43681 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.08□□□□□ -1.6
CHRNA4P43681 uc_338.9-201ENST00000617424 182 ntBASIC5.08□□□□□ -1.6
CHRNA4P43681 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CHRNA4P43681 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CHRNA4P43681 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CHRNA4P43681 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC5.08□□□□□ -1.6
CHRNA4P43681 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC5.08□□□□□ -1.6
CHRNA4P43681 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
CHRNA4P43681 AC100778.3-201ENST00000580060 1750 ntBASIC5.08□□□□□ -1.6
CHRNA4P43681 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
CHRNA4P43681 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CHRNA4P43681 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
CHRNA4P43681 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CHRNA4P43681 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CHRNA4P43681 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CHRNA4P43681 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CHRNA4P43681 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CHRNA4P43681 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.07□□□□□ -1.6
CHRNA4P43681 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
CHRNA4P43681 RNA5SP455-201ENST00000365190 119 ntBASIC5.07□□□□□ -1.6
CHRNA4P43681 RNU6-790P-201ENST00000384479 105 ntBASIC5.07□□□□□ -1.6
CHRNA4P43681 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
CHRNA4P43681 DPPA2P3-201ENST00000411853 655 ntBASIC5.07□□□□□ -1.6
CHRNA4P43681 TRAPPC2P10-201ENST00000415662 323 ntBASIC5.07□□□□□ -1.6
CHRNA4P43681 TRAPPC2P5-201ENST00000426293 308 ntBASIC5.07□□□□□ -1.6
CHRNA4P43681 RPS29P9-201ENST00000440360 171 ntBASIC5.07□□□□□ -1.6
CHRNA4P43681 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.07□□□□□ -1.6
CHRNA4P43681 KNOP1P3-201ENST00000446933 426 ntBASIC5.07□□□□□ -1.6
CHRNA4P43681 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC5.07□□□□□ -1.6
CHRNA4P43681 RPS27AP1-201ENST00000475545 471 ntBASIC5.07□□□□□ -1.6
CHRNA4P43681 RN7SL441P-201ENST00000492388 296 ntBASIC5.07□□□□□ -1.6
CHRNA4P43681 AC010469.2-201ENST00000496412 480 ntBASIC5.07□□□□□ -1.6
CHRNA4P43681 TRAPPC2P7-201ENST00000509650 231 ntBASIC5.07□□□□□ -1.6
CHRNA4P43681 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC5.07□□□□□ -1.6
CHRNA4P43681 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC5.07□□□□□ -1.6
CHRNA4P43681 RN7SKP96-201ENST00000516948 297 ntBASIC5.07□□□□□ -1.6
CHRNA4P43681 Y_RNA.719-201ENST00000517156 106 ntBASIC5.07□□□□□ -1.6
CHRNA4P43681 AP006245.2-201ENST00000522004 300 ntBASIC5.07□□□□□ -1.6
CHRNA4P43681 AC104576.1-201ENST00000524225 88 ntBASIC5.07□□□□□ -1.6
CHRNA4P43681 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC5.07□□□□□ -1.6
CHRNA4P43681 SYF2P1-201ENST00000550658 413 ntBASIC5.07□□□□□ -1.6
CHRNA4P43681 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC5.07□□□□□ -1.6
CHRNA4P43681 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC5.07□□□□□ -1.6
CHRNA4P43681 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CHRNA4P43681 MIR4691-201ENST00000583764 85 ntBASIC5.07□□□□□ -1.6
CHRNA4P43681 AC006116.3-201ENST00000592968 361 ntBASIC5.07□□□□□ -1.6
CHRNA4P43681 AL160281.1-201ENST00000605307 311 ntBASIC5.07□□□□□ -1.6
CHRNA4P43681 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.07□□□□□ -1.6
CHRNA4P43681 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
CHRNA4P43681 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
CHRNA4P43681 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
CHRNA4P43681 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC5.07□□□□□ -1.6
CHRNA4P43681 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.07□□□□□ -1.6
CHRNA4P43681 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.07□□□□□ -1.6
CHRNA4P43681 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 121 ms