Protein–RNA interactions for Protein: P38398

BRCA1, Breast cancer type 1 susceptibility protein, humanhuman

Known RBP Predictions only

Length 1,863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1P38398 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC2.51□□□□□ -2.01
BRCA1P38398 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC2.51□□□□□ -2.01
BRCA1P38398 MIR4303-201ENST00000581299 66 ntBASIC2.51□□□□□ -2.01
BRCA1P38398 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC2.51□□□□□ -2.01
BRCA1P38398 AC106028.5-201ENST00000610332 395 ntBASIC2.51□□□□□ -2.01
BRCA1P38398 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.51□□□□□ -2.01
BRCA1P38398 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC2.51□□□□□ -2.01
BRCA1P38398 AC131280.1-202ENST00000624067 4211 ntBASIC2.51□□□□□ -2.01
BRCA1P38398 API5P2-201ENST00000397055 1498 ntBASIC2.5□□□□□ -2.01
BRCA1P38398 HMGB1P5-201ENST00000255320 642 ntBASIC2.5□□□□□ -2.01
BRCA1P38398 RNU6-353P-201ENST00000364266 108 ntBASIC2.5□□□□□ -2.01
BRCA1P38398 SNORA25.9-201ENST00000365087 128 ntBASIC2.5□□□□□ -2.01
BRCA1P38398 DEFA7P-201ENST00000382676 285 ntBASIC2.5□□□□□ -2.01
BRCA1P38398 RNU6-1074P-201ENST00000383995 104 ntBASIC2.5□□□□□ -2.01
BRCA1P38398 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC2.5□□□□□ -2.01
BRCA1P38398 MTCO3P1-205ENST00000422088 832 ntBASIC2.5□□□□□ -2.01
BRCA1P38398 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC2.5□□□□□ -2.01
BRCA1P38398 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC2.5□□□□□ -2.01
BRCA1P38398 AL590664.1-201ENST00000448065 339 ntBASIC2.5□□□□□ -2.01
BRCA1P38398 AC104164.3-201ENST00000467363 1258 ntBASIC2.5□□□□□ -2.01
BRCA1P38398 AC109471.1-201ENST00000511631 612 ntBASIC2.5□□□□□ -2.01
BRCA1P38398 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC2.5□□□□□ -2.01
BRCA1P38398 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.5□□□□□ -2.01
BRCA1P38398 AL031176.1-201ENST00000604554 466 ntBASIC2.5□□□□□ -2.01
BRCA1P38398 AP002826.1-201ENST00000608835 315 ntBASIC2.5□□□□□ -2.01
BRCA1P38398 AC073968.1-201ENST00000618594 637 ntBASIC2.5□□□□□ -2.01
BRCA1P38398 AC080188.3-201ENST00000624842 748 ntBASIC2.5□□□□□ -2.01
BRCA1P38398 AC087821.2-201ENST00000637086 450 ntBASIC2.5□□□□□ -2.01
BRCA1P38398 AL136164.4-201ENST00000625013 2135 ntBASIC2.5□□□□□ -2.01
BRCA1P38398 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC2.5□□□□□ -2.01
BRCA1P38398 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
BRCA1P38398 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.5□□□□□ -2.01
BRCA1P38398 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC2.5□□□□□ -2.01
BRCA1P38398 RNU6-661P-201ENST00000362409 107 ntBASIC2.5□□□□□ -2.01
BRCA1P38398 UBE2D3P3-201ENST00000426992 425 ntBASIC2.5□□□□□ -2.01
BRCA1P38398 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.5□□□□□ -2.01
BRCA1P38398 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC2.5□□□□□ -2.01
BRCA1P38398 RPL23AP76-201ENST00000441860 458 ntBASIC2.5□□□□□ -2.01
BRCA1P38398 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC2.5□□□□□ -2.01
BRCA1P38398 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
BRCA1P38398 AL359273.1-201ENST00000510918 627 ntBASIC2.5□□□□□ -2.01
BRCA1P38398 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.5□□□□□ -2.01
BRCA1P38398 AC090502.2-201ENST00000549267 280 ntBASIC2.5□□□□□ -2.01
BRCA1P38398 COX6CP3-201ENST00000580869 223 ntBASIC2.5□□□□□ -2.01
BRCA1P38398 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC2.5□□□□□ -2.01
BRCA1P38398 AL109653.1-201ENST00000603091 248 ntBASIC2.5□□□□□ -2.01
BRCA1P38398 AL391813.2-201ENST00000609113 322 ntBASIC2.5□□□□□ -2.01
BRCA1P38398 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
BRCA1P38398 AC109454.4-201ENST00000623411 649 ntBASIC2.5□□□□□ -2.01
BRCA1P38398 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.49□□□□□ -2.01
BRCA1P38398 RNU6-216P-201ENST00000363282 104 ntBASIC2.49□□□□□ -2.01
BRCA1P38398 RNU1-51P-201ENST00000365345 176 ntBASIC2.49□□□□□ -2.01
BRCA1P38398 U8.8-201ENST00000365399 135 ntBASIC2.49□□□□□ -2.01
BRCA1P38398 AL357078.2-201ENST00000416486 427 ntBASIC2.49□□□□□ -2.01
BRCA1P38398 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC2.49□□□□□ -2.01
BRCA1P38398 USP9YP8-201ENST00000441913 500 ntBASIC2.49□□□□□ -2.01
BRCA1P38398 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC2.49□□□□□ -2.01
BRCA1P38398 FABP5P13-201ENST00000452144 328 ntBASIC2.49□□□□□ -2.01
BRCA1P38398 RNU7-140P-201ENST00000459546 60 ntBASIC2.49□□□□□ -2.01
BRCA1P38398 NAP1L1P3-201ENST00000462291 880 ntBASIC2.49□□□□□ -2.01
BRCA1P38398 AC096751.1-202ENST00000502691 1067 ntBASIC2.49□□□□□ -2.01
BRCA1P38398 AC008427.1-201ENST00000503102 655 ntBASIC2.49□□□□□ -2.01
BRCA1P38398 MTCO2P9-201ENST00000503214 694 ntBASIC2.49□□□□□ -2.01
BRCA1P38398 NAMPTP2-201ENST00000505629 1115 ntBASIC2.49□□□□□ -2.01
BRCA1P38398 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC2.49□□□□□ -2.01
BRCA1P38398 AC010625.1-201ENST00000511296 403 ntBASIC2.49□□□□□ -2.01
BRCA1P38398 RNU6-826P-201ENST00000516827 104 ntBASIC2.49□□□□□ -2.01
BRCA1P38398 HSPA8P13-201ENST00000523715 472 ntBASIC2.49□□□□□ -2.01
BRCA1P38398 REXO2-218ENST00000544827 880 ntTSL 3 BASIC2.49□□□□□ -2.01
BRCA1P38398 OR4T1P-201ENST00000554933 911 ntBASIC2.49□□□□□ -2.01
BRCA1P38398 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.49□□□□□ -2.01
BRCA1P38398 MAGOH2P-202ENST00000584384 429 ntBASIC2.49□□□□□ -2.01
BRCA1P38398 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC2.49□□□□□ -2.01
BRCA1P38398 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC2.49□□□□□ -2.01
BRCA1P38398 AC098483.2-201ENST00000603158 454 ntBASIC2.49□□□□□ -2.01
BRCA1P38398 AC005776.1-201ENST00000603164 290 ntBASIC2.49□□□□□ -2.01
BRCA1P38398 AC091946.2-201ENST00000606105 291 ntBASIC2.49□□□□□ -2.01
BRCA1P38398 AC016877.3-201ENST00000606778 504 ntBASIC2.49□□□□□ -2.01
BRCA1P38398 AC120053.1-201ENST00000607706 736 ntBASIC2.49□□□□□ -2.01
BRCA1P38398 AC093838.1-201ENST00000613014 469 ntBASIC2.49□□□□□ -2.01
BRCA1P38398 AL161629.2-201ENST00000615347 275 ntBASIC2.49□□□□□ -2.01
BRCA1P38398 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC2.49□□□□□ -2.01
BRCA1P38398 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
BRCA1P38398 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
BRCA1P38398 NUP58P1-201ENST00000502546 1738 ntBASIC2.49□□□□□ -2.01
BRCA1P38398 AL136520.1-201ENST00000600311 1322 ntBASIC2.49□□□□□ -2.01
BRCA1P38398 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
BRCA1P38398 AL161431.1-201ENST00000618966 4205 ntBASIC2.48□□□□□ -2.01
BRCA1P38398 MIR6073-201ENST00000352083 89 ntBASIC2.48□□□□□ -2.01
BRCA1P38398 RNA5SP190-201ENST00000365222 118 ntBASIC2.48□□□□□ -2.01
BRCA1P38398 RNU6-609P-201ENST00000365459 107 ntBASIC2.48□□□□□ -2.01
BRCA1P38398 SNORD116-23-201ENST00000384645 92 ntBASIC2.48□□□□□ -2.01
BRCA1P38398 AL355615.1-201ENST00000406187 641 ntBASIC2.48□□□□□ -2.01
BRCA1P38398 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
BRCA1P38398 RNU2-28P-201ENST00000410457 189 ntBASIC2.48□□□□□ -2.01
BRCA1P38398 RNU6-1077P-201ENST00000410506 102 ntBASIC2.48□□□□□ -2.01
BRCA1P38398 RNU2-72P-201ENST00000411175 163 ntBASIC2.48□□□□□ -2.01
BRCA1P38398 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC2.48□□□□□ -2.01
BRCA1P38398 BTF3P4-201ENST00000418852 495 ntBASIC2.48□□□□□ -2.01
BRCA1P38398 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 116.5 ms