Protein–RNA interactions for Protein: P13378

HOXD8, Homeobox protein Hox-D8, humanhuman

Predicted RBP Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8P13378 RPL21P1-201ENST00000399532 476 ntBASIC5.24□□□□□ -1.57
HOXD8P13378 AC007738.1-201ENST00000413892 348 ntBASIC5.24□□□□□ -1.57
HOXD8P13378 AL137014.1-201ENST00000420490 1226 ntBASIC5.24□□□□□ -1.57
HOXD8P13378 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC5.24□□□□□ -1.57
HOXD8P13378 FTH1P25-201ENST00000447665 469 ntBASIC5.24□□□□□ -1.57
HOXD8P13378 SNORD127-201ENST00000458892 86 ntBASIC5.24□□□□□ -1.57
HOXD8P13378 RPL37P6-201ENST00000460682 294 ntBASIC5.24□□□□□ -1.57
HOXD8P13378 RPL17P19-201ENST00000489069 552 ntBASIC5.24□□□□□ -1.57
HOXD8P13378 RNU6-352P-201ENST00000516908 107 ntBASIC5.24□□□□□ -1.57
HOXD8P13378 RN7SKP60-201ENST00000516985 239 ntBASIC5.24□□□□□ -1.57
HOXD8P13378 RN7SKP40-201ENST00000517211 242 ntBASIC5.24□□□□□ -1.57
HOXD8P13378 AC090151.1-201ENST00000520784 730 ntBASIC5.24□□□□□ -1.57
HOXD8P13378 AP001781.1-201ENST00000530977 207 ntBASIC5.24□□□□□ -1.57
HOXD8P13378 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
HOXD8P13378 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC5.24□□□□□ -1.57
HOXD8P13378 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC5.24□□□□□ -1.57
HOXD8P13378 IGKV2OR2-2-201ENST00000605025 300 ntBASIC5.24□□□□□ -1.57
HOXD8P13378 AC007619.2-201ENST00000605743 379 ntBASIC5.24□□□□□ -1.57
HOXD8P13378 MIR4272-201ENST00000635924 64 ntBASIC5.24□□□□□ -1.57
HOXD8P13378 BTBD10P1-201ENST00000549824 1352 ntBASIC5.24□□□□□ -1.57
HOXD8P13378 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC5.24□□□□□ -1.57
HOXD8P13378 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC5.24□□□□□ -1.57
HOXD8P13378 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
HOXD8P13378 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
HOXD8P13378 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
HOXD8P13378 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.24□□□□□ -1.57
HOXD8P13378 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
HOXD8P13378 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
HOXD8P13378 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
HOXD8P13378 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
HOXD8P13378 AC007529.1-201ENST00000418574 2178 ntBASIC5.23□□□□□ -1.57
HOXD8P13378 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
HOXD8P13378 AC032011.1-201ENST00000611703 1549 ntBASIC5.23□□□□□ -1.57
HOXD8P13378 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
HOXD8P13378 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
HOXD8P13378 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.23□□□□□ -1.57
HOXD8P13378 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
HOXD8P13378 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
HOXD8P13378 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
HOXD8P13378 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC5.23□□□□□ -1.57
HOXD8P13378 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.23□□□□□ -1.57
HOXD8P13378 RNU6-288P-201ENST00000363690 104 ntBASIC5.23□□□□□ -1.57
HOXD8P13378 Y_RNA.222-201ENST00000364264 102 ntBASIC5.23□□□□□ -1.57
HOXD8P13378 RNA5SP479-201ENST00000364858 117 ntBASIC5.23□□□□□ -1.57
HOXD8P13378 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
HOXD8P13378 Y_RNA.483-201ENST00000384380 101 ntBASIC5.23□□□□□ -1.57
HOXD8P13378 AC092447.6-201ENST00000414578 210 ntBASIC5.23□□□□□ -1.57
HOXD8P13378 GNG5P5-201ENST00000420444 220 ntBASIC5.23□□□□□ -1.57
HOXD8P13378 AC099336.2-201ENST00000422457 254 ntBASIC5.23□□□□□ -1.57
HOXD8P13378 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC5.23□□□□□ -1.57
HOXD8P13378 AC099560.2-201ENST00000457554 255 ntBASIC5.23□□□□□ -1.57
HOXD8P13378 RNU6-953P-201ENST00000459154 107 ntBASIC5.23□□□□□ -1.57
HOXD8P13378 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC5.23□□□□□ -1.57
HOXD8P13378 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC5.23□□□□□ -1.57
HOXD8P13378 OR5D17P-201ENST00000531492 978 ntBASIC5.23□□□□□ -1.57
HOXD8P13378 AC005868.1-201ENST00000536421 331 ntBASIC5.23□□□□□ -1.57
HOXD8P13378 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
HOXD8P13378 FKBP1BP1-201ENST00000553366 325 ntBASIC5.23□□□□□ -1.57
HOXD8P13378 AL137100.2-201ENST00000555786 315 ntBASIC5.23□□□□□ -1.57
HOXD8P13378 AC006600.1-201ENST00000572529 153 ntBASIC5.23□□□□□ -1.57
HOXD8P13378 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC5.23□□□□□ -1.57
HOXD8P13378 MIR5188-201ENST00000583467 113 ntBASIC5.23□□□□□ -1.57
HOXD8P13378 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC5.23□□□□□ -1.57
HOXD8P13378 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC5.23□□□□□ -1.57
HOXD8P13378 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
HOXD8P13378 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.23□□□□□ -1.57
HOXD8P13378 RAD17P1-201ENST00000418130 2042 ntBASIC5.23□□□□□ -1.57
HOXD8P13378 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.23□□□□□ -1.57
HOXD8P13378 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC5.23□□□□□ -1.57
HOXD8P13378 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.23□□□□□ -1.57
HOXD8P13378 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC5.22□□□□□ -1.57
HOXD8P13378 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
HOXD8P13378 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
HOXD8P13378 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
HOXD8P13378 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
HOXD8P13378 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.22□□□□□ -1.57
HOXD8P13378 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.22□□□□□ -1.57
HOXD8P13378 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
HOXD8P13378 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
HOXD8P13378 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.22□□□□□ -1.57
HOXD8P13378 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
HOXD8P13378 AC021146.4-201ENST00000309229 279 ntBASIC5.22□□□□□ -1.57
HOXD8P13378 RNU6-1303P-201ENST00000364841 107 ntBASIC5.22□□□□□ -1.57
HOXD8P13378 Y_RNA.480-201ENST00000384364 102 ntBASIC5.22□□□□□ -1.57
HOXD8P13378 HSPE1P8-201ENST00000406997 288 ntBASIC5.22□□□□□ -1.57
HOXD8P13378 MIR548M-201ENST00000408260 86 ntBASIC5.22□□□□□ -1.57
HOXD8P13378 U3.35-201ENST00000408405 208 ntBASIC5.22□□□□□ -1.57
HOXD8P13378 RNU6-1156P-201ENST00000410365 100 ntBASIC5.22□□□□□ -1.57
HOXD8P13378 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.22□□□□□ -1.57
HOXD8P13378 AL160275.3-201ENST00000423876 471 ntBASIC5.22□□□□□ -1.57
HOXD8P13378 BX276092.3-201ENST00000424182 230 ntBASIC5.22□□□□□ -1.57
HOXD8P13378 AL158071.1-201ENST00000430315 461 ntBASIC5.22□□□□□ -1.57
HOXD8P13378 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC5.22□□□□□ -1.57
HOXD8P13378 AC073910.1-201ENST00000445047 438 ntBASIC5.22□□□□□ -1.57
HOXD8P13378 AC008264.1-201ENST00000447612 367 ntBASIC5.22□□□□□ -1.57
HOXD8P13378 OR2AQ1P-201ENST00000451972 200 ntBASIC5.22□□□□□ -1.57
HOXD8P13378 RPL23AP31-201ENST00000456160 467 ntBASIC5.22□□□□□ -1.57
HOXD8P13378 RPL39P38-201ENST00000467018 153 ntBASIC5.22□□□□□ -1.57
HOXD8P13378 AC087385.1-201ENST00000475062 312 ntBASIC5.22□□□□□ -1.57
HOXD8P13378 AC083829.1-201ENST00000503756 657 ntBASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms