Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 MIR4293-201ENST00000584305 78 ntBASIC3.54□□□□□ -1.84
PCNAP12004 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.54□□□□□ -1.84
PCNAP12004 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.54□□□□□ -1.84
PCNAP12004 AC080078.2-201ENST00000603766 501 ntBASIC3.54□□□□□ -1.84
PCNAP12004 AL022154.1-201ENST00000604698 785 ntBASIC3.54□□□□□ -1.84
PCNAP12004 AC012443.1-201ENST00000605605 231 ntBASIC3.54□□□□□ -1.84
PCNAP12004 AC103710.2-201ENST00000609912 942 ntBASIC3.54□□□□□ -1.84
PCNAP12004 AC093838.1-201ENST00000613014 469 ntBASIC3.54□□□□□ -1.84
PCNAP12004 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.54□□□□□ -1.84
PCNAP12004 AL359740.1-201ENST00000624340 592 ntBASIC3.54□□□□□ -1.84
PCNAP12004 AP000553.6-201ENST00000641242 118 ntBASIC3.54□□□□□ -1.84
PCNAP12004 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
PCNAP12004 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.54□□□□□ -1.84
PCNAP12004 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
PCNAP12004 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
PCNAP12004 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
PCNAP12004 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
PCNAP12004 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.53□□□□□ -1.84
PCNAP12004 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.53□□□□□ -1.84
PCNAP12004 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
PCNAP12004 DDX10P1-201ENST00000448545 1933 ntBASIC3.53□□□□□ -1.84
PCNAP12004 SNORA23-201ENST00000365128 182 ntBASIC3.53□□□□□ -1.84
PCNAP12004 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC3.53□□□□□ -1.84
PCNAP12004 RNU6-76P-201ENST00000384060 104 ntBASIC3.53□□□□□ -1.84
PCNAP12004 RNU6-278P-201ENST00000390945 109 ntBASIC3.53□□□□□ -1.84
PCNAP12004 AL109755.1-201ENST00000401791 649 ntBASIC3.53□□□□□ -1.84
PCNAP12004 SNORA57.3-201ENST00000411095 141 ntBASIC3.53□□□□□ -1.84
PCNAP12004 RPL21P24-201ENST00000413752 448 ntBASIC3.53□□□□□ -1.84
PCNAP12004 TRIAP1P1-201ENST00000427062 225 ntBASIC3.53□□□□□ -1.84
PCNAP12004 RPL35AP22-201ENST00000436855 335 ntBASIC3.53□□□□□ -1.84
PCNAP12004 DNAJC19P4-201ENST00000440115 345 ntBASIC3.53□□□□□ -1.84
PCNAP12004 AC005094.1-201ENST00000440420 368 ntBASIC3.53□□□□□ -1.84
PCNAP12004 ATP5C1P1-201ENST00000441945 895 ntBASIC3.53□□□□□ -1.84
PCNAP12004 AL121871.1-201ENST00000443413 436 ntBASIC3.53□□□□□ -1.84
PCNAP12004 RPL23AP31-201ENST00000456160 467 ntBASIC3.53□□□□□ -1.84
PCNAP12004 AL359385.1-201ENST00000456509 365 ntBASIC3.53□□□□□ -1.84
PCNAP12004 AP002884.2-201ENST00000471647 395 ntBASIC3.53□□□□□ -1.84
PCNAP12004 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.53□□□□□ -1.84
PCNAP12004 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.53□□□□□ -1.84
PCNAP12004 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC3.53□□□□□ -1.84
PCNAP12004 AC026784.1-201ENST00000507986 352 ntBASIC3.53□□□□□ -1.84
PCNAP12004 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC3.53□□□□□ -1.84
PCNAP12004 AC091133.4-201ENST00000511142 308 ntBASIC3.53□□□□□ -1.84
PCNAP12004 RN7SKP21-201ENST00000516503 220 ntBASIC3.53□□□□□ -1.84
PCNAP12004 RN7SKP289-201ENST00000517244 295 ntBASIC3.53□□□□□ -1.84
PCNAP12004 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC3.53□□□□□ -1.84
PCNAP12004 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC3.53□□□□□ -1.84
PCNAP12004 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC3.53□□□□□ -1.84
PCNAP12004 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.53□□□□□ -1.84
PCNAP12004 AC005951.2-201ENST00000576282 495 ntBASIC3.53□□□□□ -1.84
PCNAP12004 MIR3160-1-201ENST00000577972 85 ntBASIC3.53□□□□□ -1.84
PCNAP12004 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC3.53□□□□□ -1.84
PCNAP12004 NRBF2P1-201ENST00000587407 859 ntBASIC3.53□□□□□ -1.84
PCNAP12004 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.53□□□□□ -1.84
PCNAP12004 BNIP3P33-201ENST00000598912 569 ntBASIC3.53□□□□□ -1.84
PCNAP12004 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
PCNAP12004 AC068831.8-201ENST00000620171 435 ntBASIC3.53□□□□□ -1.84
PCNAP12004 AC136475.10-201ENST00000620253 385 ntBASIC3.53□□□□□ -1.84
PCNAP12004 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC3.53□□□□□ -1.84
PCNAP12004 AC099654.12-201ENST00000639868 649 ntBASIC3.53□□□□□ -1.84
PCNAP12004 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
PCNAP12004 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
PCNAP12004 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
PCNAP12004 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
PCNAP12004 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
PCNAP12004 PWAR6-201ENST00000552334 4618 ntBASIC3.53□□□□□ -1.84
PCNAP12004 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
PCNAP12004 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.52□□□□□ -1.85
PCNAP12004 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
PCNAP12004 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
PCNAP12004 RNA5SP515-201ENST00000364570 118 ntBASIC3.52□□□□□ -1.85
PCNAP12004 RNU6-283P-201ENST00000364788 107 ntBASIC3.52□□□□□ -1.85
PCNAP12004 RNA5SP479-201ENST00000364858 117 ntBASIC3.52□□□□□ -1.85
PCNAP12004 RNU6-39P-201ENST00000384344 107 ntBASIC3.52□□□□□ -1.85
PCNAP12004 RNU2-8P-201ENST00000410727 190 ntBASIC3.52□□□□□ -1.85
PCNAP12004 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC3.52□□□□□ -1.85
PCNAP12004 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.52□□□□□ -1.85
PCNAP12004 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC3.52□□□□□ -1.85
PCNAP12004 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
PCNAP12004 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.52□□□□□ -1.85
PCNAP12004 MTND1P34-201ENST00000438556 671 ntBASIC3.52□□□□□ -1.85
PCNAP12004 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC3.52□□□□□ -1.85
PCNAP12004 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.52□□□□□ -1.85
PCNAP12004 C1DP4-201ENST00000455429 424 ntBASIC3.52□□□□□ -1.85
PCNAP12004 AL133162.1-201ENST00000463228 453 ntBASIC3.52□□□□□ -1.85
PCNAP12004 AC008481.1-201ENST00000463278 396 ntBASIC3.52□□□□□ -1.85
PCNAP12004 RPL21P8-201ENST00000465083 535 ntBASIC3.52□□□□□ -1.85
PCNAP12004 RPL9P33-201ENST00000484311 566 ntBASIC3.52□□□□□ -1.85
PCNAP12004 AC108860.1-201ENST00000484521 383 ntBASIC3.52□□□□□ -1.85
PCNAP12004 AC006483.1-201ENST00000487308 313 ntBASIC3.52□□□□□ -1.85
PCNAP12004 RPL9P6-201ENST00000492764 598 ntBASIC3.52□□□□□ -1.85
PCNAP12004 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
PCNAP12004 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.52□□□□□ -1.85
PCNAP12004 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.52□□□□□ -1.85
PCNAP12004 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.52□□□□□ -1.85
PCNAP12004 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC3.52□□□□□ -1.85
PCNAP12004 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.52□□□□□ -1.85
PCNAP12004 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
PCNAP12004 ARL2BPP2-201ENST00000550907 489 ntBASIC3.52□□□□□ -1.85
PCNAP12004 MED28P6-201ENST00000558776 231 ntBASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms