Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
RB1P06400 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.53□□□□□ -1.84
RB1P06400 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.53□□□□□ -1.84
RB1P06400 MIR5697-201ENST00000578045 78 ntBASIC3.53□□□□□ -1.84
RB1P06400 AL355472.4-201ENST00000610233 626 ntBASIC3.53□□□□□ -1.84
RB1P06400 RNVU1-4-201ENST00000612985 164 ntBASIC3.53□□□□□ -1.84
RB1P06400 AC093838.1-201ENST00000613014 469 ntBASIC3.53□□□□□ -1.84
RB1P06400 AC104010.1-201ENST00000616889 150 ntBASIC3.53□□□□□ -1.84
RB1P06400 AC018692.3-201ENST00000623929 123 ntBASIC3.53□□□□□ -1.84
RB1P06400 AC002546.1-201ENST00000588041 2504 ntBASIC3.53□□□□□ -1.84
RB1P06400 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC3.53□□□□□ -1.85
RB1P06400 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
RB1P06400 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
RB1P06400 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
RB1P06400 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
RB1P06400 RNU4-21P-201ENST00000362802 126 ntBASIC3.52□□□□□ -1.85
RB1P06400 RNA5SP197-201ENST00000363357 119 ntBASIC3.52□□□□□ -1.85
RB1P06400 SNORA23-201ENST00000365128 182 ntBASIC3.52□□□□□ -1.85
RB1P06400 SNORA36C-201ENST00000384289 132 ntBASIC3.52□□□□□ -1.85
RB1P06400 AL591034.1-201ENST00000407447 340 ntBASIC3.52□□□□□ -1.85
RB1P06400 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.52□□□□□ -1.85
RB1P06400 HMGB3P23-201ENST00000414981 585 ntBASIC3.52□□□□□ -1.85
RB1P06400 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC3.52□□□□□ -1.85
RB1P06400 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.52□□□□□ -1.85
RB1P06400 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC3.52□□□□□ -1.85
RB1P06400 TRIM60P18-201ENST00000441518 828 ntBASIC3.52□□□□□ -1.85
RB1P06400 TXNP1-201ENST00000441872 371 ntBASIC3.52□□□□□ -1.85
RB1P06400 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.52□□□□□ -1.85
RB1P06400 AL357552.1-201ENST00000445254 415 ntBASIC3.52□□□□□ -1.85
RB1P06400 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC3.52□□□□□ -1.85
RB1P06400 RPL23AP14-201ENST00000468281 468 ntBASIC3.52□□□□□ -1.85
RB1P06400 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.52□□□□□ -1.85
RB1P06400 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.52□□□□□ -1.85
RB1P06400 ARL2BPP6-201ENST00000512757 439 ntBASIC3.52□□□□□ -1.85
RB1P06400 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC3.52□□□□□ -1.85
RB1P06400 AP001804.3-201ENST00000525146 880 ntBASIC3.52□□□□□ -1.85
RB1P06400 AP000857.1-201ENST00000532151 543 ntBASIC3.52□□□□□ -1.85
RB1P06400 AL133153.1-201ENST00000557756 303 ntBASIC3.52□□□□□ -1.85
RB1P06400 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.52□□□□□ -1.85
RB1P06400 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.52□□□□□ -1.85
RB1P06400 AC099489.2-201ENST00000574976 260 ntBASIC3.52□□□□□ -1.85
RB1P06400 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.52□□□□□ -1.85
RB1P06400 AC105129.3-201ENST00000605455 485 ntBASIC3.52□□□□□ -1.85
RB1P06400 AC007038.2-201ENST00000608095 740 ntBASIC3.52□□□□□ -1.85
RB1P06400 AL390240.1-201ENST00000612950 384 ntBASIC3.52□□□□□ -1.85
RB1P06400 TUG1_2.1-201ENST00000614234 87 ntBASIC3.52□□□□□ -1.85
RB1P06400 AL157817.1-201ENST00000614264 790 ntBASIC3.52□□□□□ -1.85
RB1P06400 AC027807.2-201ENST00000616099 408 ntBASIC3.52□□□□□ -1.85
RB1P06400 AC068647.1-201ENST00000489539 2265 ntBASIC3.52□□□□□ -1.85
RB1P06400 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.52□□□□□ -1.85
RB1P06400 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.51□□□□□ -1.85
RB1P06400 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
RB1P06400 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.51□□□□□ -1.85
RB1P06400 SNORA5B-201ENST00000363786 132 ntBASIC3.51□□□□□ -1.85
RB1P06400 RNU6-283P-201ENST00000364788 107 ntBASIC3.51□□□□□ -1.85
RB1P06400 RNU5E-5P-201ENST00000365379 116 ntBASIC3.51□□□□□ -1.85
RB1P06400 MIR493-201ENST00000385254 89 ntBASIC3.51□□□□□ -1.85
RB1P06400 AL109755.1-201ENST00000401791 649 ntBASIC3.51□□□□□ -1.85
RB1P06400 AL391417.1-201ENST00000404100 426 ntBASIC3.51□□□□□ -1.85
RB1P06400 MIR1290-201ENST00000408735 78 ntBASIC3.51□□□□□ -1.85
RB1P06400 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
RB1P06400 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC3.51□□□□□ -1.85
RB1P06400 RPL30P2-201ENST00000414021 291 ntBASIC3.51□□□□□ -1.85
RB1P06400 Z99755.1-201ENST00000414048 380 ntBASIC3.51□□□□□ -1.85
RB1P06400 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.51□□□□□ -1.85
RB1P06400 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC3.51□□□□□ -1.85
RB1P06400 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC3.51□□□□□ -1.85
RB1P06400 RPL22P17-201ENST00000438729 315 ntBASIC3.51□□□□□ -1.85
RB1P06400 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.51□□□□□ -1.85
RB1P06400 RNU7-59P-201ENST00000459101 61 ntBASIC3.51□□□□□ -1.85
RB1P06400 RN7SL429P-201ENST00000479090 223 ntBASIC3.51□□□□□ -1.85
RB1P06400 RN7SL489P-201ENST00000486185 223 ntBASIC3.51□□□□□ -1.85
RB1P06400 RN7SL327P-201ENST00000488659 223 ntBASIC3.51□□□□□ -1.85
RB1P06400 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.51□□□□□ -1.85
RB1P06400 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC3.51□□□□□ -1.85
RB1P06400 Y_RNA.688-201ENST00000516565 95 ntBASIC3.51□□□□□ -1.85
RB1P06400 SNORA70.19-201ENST00000516717 90 ntBASIC3.51□□□□□ -1.85
RB1P06400 RNU6-201P-201ENST00000517100 61 ntBASIC3.51□□□□□ -1.85
RB1P06400 AP006245.1-201ENST00000522549 120 ntBASIC3.51□□□□□ -1.85
RB1P06400 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC3.51□□□□□ -1.85
RB1P06400 ZNF519P3-201ENST00000557158 1032 ntBASIC3.51□□□□□ -1.85
RB1P06400 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.51□□□□□ -1.85
RB1P06400 AL356432.3-201ENST00000568952 465 ntBASIC3.51□□□□□ -1.85
RB1P06400 AC015917.1-201ENST00000579654 510 ntBASIC3.51□□□□□ -1.85
RB1P06400 ABBA01006766.1-201ENST00000584728 294 ntBASIC3.51□□□□□ -1.85
RB1P06400 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.51□□□□□ -1.85
RB1P06400 AC012065.4-201ENST00000602445 679 ntBASIC3.51□□□□□ -1.85
RB1P06400 RPL12P50-201ENST00000603116 116 ntBASIC3.51□□□□□ -1.85
RB1P06400 AL590229.1-201ENST00000603497 542 ntBASIC3.51□□□□□ -1.85
RB1P06400 OR2AS2P-201ENST00000606902 342 ntBASIC3.51□□□□□ -1.85
RB1P06400 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC3.51□□□□□ -1.85
RB1P06400 AP000254.1-201ENST00000609934 520 ntBASIC3.51□□□□□ -1.85
RB1P06400 RN7SL853P-201ENST00000617250 223 ntBASIC3.51□□□□□ -1.85
RB1P06400 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
RB1P06400 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
RB1P06400 MTND4P4-201ENST00000439033 1366 ntBASIC3.51□□□□□ -1.85
RB1P06400 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
RB1P06400 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
RB1P06400 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
RB1P06400 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms