Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 AL590240.3-201ENST00000621416 943 ntBASIC3.23□□□□□ -1.89
VTNP04004 AC025048.6-202ENST00000627667 438 ntBASIC3.23□□□□□ -1.89
VTNP04004 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.23□□□□□ -1.89
VTNP04004 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC3.23□□□□□ -1.89
VTNP04004 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
VTNP04004 SRP72P2-201ENST00000344851 1979 ntBASIC3.22□□□□□ -1.89
VTNP04004 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.22□□□□□ -1.89
VTNP04004 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.22□□□□□ -1.89
VTNP04004 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
VTNP04004 Y_RNA.77-201ENST00000362962 107 ntBASIC3.22□□□□□ -1.89
VTNP04004 Y_RNA.97-201ENST00000363094 102 ntBASIC3.22□□□□□ -1.89
VTNP04004 SNORD6-201ENST00000365444 73 ntBASIC3.22□□□□□ -1.89
VTNP04004 Y_RNA.500-201ENST00000384466 111 ntBASIC3.22□□□□□ -1.89
VTNP04004 RNY3P10-201ENST00000384764 102 ntBASIC3.22□□□□□ -1.89
VTNP04004 RN7SKP142-201ENST00000411236 328 ntBASIC3.22□□□□□ -1.89
VTNP04004 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC3.22□□□□□ -1.89
VTNP04004 AC245291.1-201ENST00000419501 328 ntBASIC3.22□□□□□ -1.89
VTNP04004 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.22□□□□□ -1.89
VTNP04004 CYCSP46-201ENST00000423569 204 ntBASIC3.22□□□□□ -1.89
VTNP04004 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC3.22□□□□□ -1.89
VTNP04004 EZH2P1-201ENST00000431167 291 ntBASIC3.22□□□□□ -1.89
VTNP04004 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC3.22□□□□□ -1.89
VTNP04004 MTND4LP10-201ENST00000435146 291 ntBASIC3.22□□□□□ -1.89
VTNP04004 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC3.22□□□□□ -1.89
VTNP04004 AL662791.1-201ENST00000441992 928 ntBASIC3.22□□□□□ -1.89
VTNP04004 COX6CP2-201ENST00000444980 225 ntBASIC3.22□□□□□ -1.89
VTNP04004 HMGN2P16-201ENST00000456802 261 ntBASIC3.22□□□□□ -1.89
VTNP04004 MTCO1P42-201ENST00000457379 726 ntBASIC3.22□□□□□ -1.89
VTNP04004 snoU13.4-201ENST00000458916 104 ntBASIC3.22□□□□□ -1.89
VTNP04004 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
VTNP04004 VN1R104P-201ENST00000505115 1009 ntBASIC3.22□□□□□ -1.89
VTNP04004 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC3.22□□□□□ -1.89
VTNP04004 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC3.22□□□□□ -1.89
VTNP04004 RNA5SP356-201ENST00000515972 94 ntBASIC3.22□□□□□ -1.89
VTNP04004 SNORA70.14-201ENST00000516205 110 ntBASIC3.22□□□□□ -1.89
VTNP04004 RNA5SP367-201ENST00000516557 118 ntBASIC3.22□□□□□ -1.89
VTNP04004 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.22□□□□□ -1.89
VTNP04004 RPL12P22-201ENST00000519073 490 ntBASIC3.22□□□□□ -1.89
VTNP04004 AC091489.2-201ENST00000566263 604 ntBASIC3.22□□□□□ -1.89
VTNP04004 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC3.22□□□□□ -1.89
VTNP04004 MIR5047-201ENST00000579212 100 ntBASIC3.22□□□□□ -1.89
VTNP04004 AL353997.4-201ENST00000586196 166 ntBASIC3.22□□□□□ -1.89
VTNP04004 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.22□□□□□ -1.89
VTNP04004 AC073544.2-201ENST00000601155 540 ntBASIC3.22□□□□□ -1.89
VTNP04004 AP000403.1-201ENST00000603349 851 ntBASIC3.22□□□□□ -1.89
VTNP04004 AC112187.2-201ENST00000604345 283 ntBASIC3.22□□□□□ -1.89
VTNP04004 AL031176.1-201ENST00000604554 466 ntBASIC3.22□□□□□ -1.89
VTNP04004 AC068276.1-201ENST00000605793 379 ntBASIC3.22□□□□□ -1.89
VTNP04004 RN7SKP299-201ENST00000606679 301 ntBASIC3.22□□□□□ -1.89
VTNP04004 AC091965.4-201ENST00000607691 587 ntBASIC3.22□□□□□ -1.89
VTNP04004 AL353748.2-201ENST00000622148 471 ntBASIC3.22□□□□□ -1.89
VTNP04004 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.22□□□□□ -1.89
VTNP04004 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.22□□□□□ -1.89
VTNP04004 AC009487.2-201ENST00000420969 6821 ntBASIC3.22□□□□□ -1.89
VTNP04004 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.22□□□□□ -1.89
VTNP04004 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.22□□□□□ -1.89
VTNP04004 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
VTNP04004 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
VTNP04004 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
VTNP04004 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
VTNP04004 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.21□□□□□ -1.89
VTNP04004 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC3.21□□□□□ -1.9
VTNP04004 Y_RNA.51-201ENST00000362725 102 ntBASIC3.21□□□□□ -1.9
VTNP04004 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
VTNP04004 RNU6-769P-201ENST00000384407 104 ntBASIC3.21□□□□□ -1.9
VTNP04004 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
VTNP04004 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC3.21□□□□□ -1.9
VTNP04004 AL592148.1-201ENST00000413568 445 ntBASIC3.21□□□□□ -1.9
VTNP04004 BTF3L4P1-201ENST00000413813 468 ntBASIC3.21□□□□□ -1.9
VTNP04004 RPS15AP6-201ENST00000420703 385 ntBASIC3.21□□□□□ -1.9
VTNP04004 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC3.21□□□□□ -1.9
VTNP04004 AC010153.1-201ENST00000432862 727 ntBASIC3.21□□□□□ -1.9
VTNP04004 RSU1P2-202ENST00000437884 485 ntBASIC3.21□□□□□ -1.9
VTNP04004 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
VTNP04004 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC3.21□□□□□ -1.9
VTNP04004 FAM103A2P-201ENST00000444122 354 ntBASIC3.21□□□□□ -1.9
VTNP04004 GDI2P2-201ENST00000445131 608 ntBASIC3.21□□□□□ -1.9
VTNP04004 TAF9P1-201ENST00000445421 515 ntBASIC3.21□□□□□ -1.9
VTNP04004 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.21□□□□□ -1.9
VTNP04004 AL162389.1-201ENST00000449233 177 ntBASIC3.21□□□□□ -1.9
VTNP04004 TAF9P2-201ENST00000454958 515 ntBASIC3.21□□□□□ -1.9
VTNP04004 AP000797.1-201ENST00000478870 387 ntBASIC3.21□□□□□ -1.9
VTNP04004 AC004924.1-201ENST00000480160 781 ntBASIC3.21□□□□□ -1.9
VTNP04004 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC3.21□□□□□ -1.9
VTNP04004 AC034222.1-201ENST00000494052 532 ntBASIC3.21□□□□□ -1.9
VTNP04004 RPL23AP94-201ENST00000512518 302 ntBASIC3.21□□□□□ -1.9
VTNP04004 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC3.21□□□□□ -1.9
VTNP04004 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC3.21□□□□□ -1.9
VTNP04004 AC018630.1-201ENST00000541376 925 ntBASIC3.21□□□□□ -1.9
VTNP04004 AC007115.1-201ENST00000546853 234 ntBASIC3.21□□□□□ -1.9
VTNP04004 MEG8-218ENST00000556720 456 ntTSL 3 BASIC3.21□□□□□ -1.9
VTNP04004 AC012414.6-201ENST00000568241 401 ntBASIC3.21□□□□□ -1.9
VTNP04004 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC3.21□□□□□ -1.9
VTNP04004 AC083760.1-201ENST00000589621 670 ntBASIC3.21□□□□□ -1.9
VTNP04004 TPMTP1-201ENST00000592307 737 ntBASIC3.21□□□□□ -1.9
VTNP04004 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC3.21□□□□□ -1.9
VTNP04004 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
VTNP04004 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.21□□□□□ -1.9
VTNP04004 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
VTNP04004 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms