Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 U3.20-201ENST00000390909 217 ntBASIC1.6□□□□□ -2.15
TNFP01375 U3.29-201ENST00000391296 212 ntBASIC1.6□□□□□ -2.15
TNFP01375 RNU6-920P-201ENST00000410926 92 ntBASIC1.6□□□□□ -2.15
TNFP01375 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC1.6□□□□□ -2.15
TNFP01375 AL592045.1-201ENST00000429867 352 ntBASIC1.6□□□□□ -2.15
TNFP01375 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC1.6□□□□□ -2.15
TNFP01375 HMGB1P18-201ENST00000438801 619 ntBASIC1.6□□□□□ -2.15
TNFP01375 OSTCP8-201ENST00000445117 448 ntBASIC1.6□□□□□ -2.15
TNFP01375 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC1.6□□□□□ -2.15
TNFP01375 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.6□□□□□ -2.15
TNFP01375 AC104629.2-201ENST00000468627 598 ntBASIC1.6□□□□□ -2.15
TNFP01375 AC069528.1-202ENST00000482888 637 ntBASIC1.6□□□□□ -2.15
TNFP01375 AC096751.1-202ENST00000502691 1067 ntBASIC1.6□□□□□ -2.15
TNFP01375 MTCYBP17-201ENST00000503579 789 ntBASIC1.6□□□□□ -2.15
TNFP01375 AC096571.1-202ENST00000506634 735 ntBASIC1.6□□□□□ -2.15
TNFP01375 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC1.6□□□□□ -2.15
TNFP01375 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC1.6□□□□□ -2.15
TNFP01375 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC1.6□□□□□ -2.15
TNFP01375 AC090888.1-201ENST00000561335 1141 ntBASIC1.6□□□□□ -2.15
TNFP01375 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC1.6□□□□□ -2.15
TNFP01375 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC1.6□□□□□ -2.15
TNFP01375 AC024614.2-201ENST00000577584 372 ntBASIC1.6□□□□□ -2.15
TNFP01375 AC124283.4-201ENST00000581815 456 ntBASIC1.6□□□□□ -2.15
TNFP01375 MIR3616-201ENST00000584070 92 ntBASIC1.6□□□□□ -2.15
TNFP01375 AP005137.2-201ENST00000609238 400 ntBASIC1.6□□□□□ -2.15
TNFP01375 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC1.6□□□□□ -2.15
TNFP01375 AC091932.3-201ENST00000624223 323 ntBASIC1.6□□□□□ -2.15
TNFP01375 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC1.6□□□□□ -2.15
TNFP01375 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
TNFP01375 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.59□□□□□ -2.15
TNFP01375 MIR378A-201ENST00000362177 66 ntBASIC1.59□□□□□ -2.15
TNFP01375 RNU6-1249P-201ENST00000363237 111 ntBASIC1.59□□□□□ -2.15
TNFP01375 Y_RNA.338-201ENST00000365320 114 ntBASIC1.59□□□□□ -2.15
TNFP01375 RNU6-452P-201ENST00000384406 107 ntBASIC1.59□□□□□ -2.15
TNFP01375 MIR767-201ENST00000390228 109 ntBASIC1.59□□□□□ -2.15
TNFP01375 AL023807.1-201ENST00000407932 359 ntBASIC1.59□□□□□ -2.15
TNFP01375 Y_RNA.595-201ENST00000410403 105 ntBASIC1.59□□□□□ -2.15
TNFP01375 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.59□□□□□ -2.15
TNFP01375 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.59□□□□□ -2.15
TNFP01375 CABYRP1-201ENST00000465493 1045 ntBASIC1.59□□□□□ -2.15
TNFP01375 AP000926.3-201ENST00000497201 299 ntBASIC1.59□□□□□ -2.15
TNFP01375 RNU2-44P-201ENST00000516795 194 ntBASIC1.59□□□□□ -2.15
TNFP01375 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.59□□□□□ -2.15
TNFP01375 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.59□□□□□ -2.15
TNFP01375 AC084851.1-201ENST00000529105 249 ntBASIC1.59□□□□□ -2.15
TNFP01375 CBX3P4-201ENST00000538909 354 ntBASIC1.59□□□□□ -2.15
TNFP01375 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC1.59□□□□□ -2.15
TNFP01375 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC1.59□□□□□ -2.15
TNFP01375 MIR4504-201ENST00000577413 92 ntBASIC1.59□□□□□ -2.15
TNFP01375 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC1.59□□□□□ -2.15
TNFP01375 AP004372.1-201ENST00000604842 844 ntBASIC1.59□□□□□ -2.15
TNFP01375 AC016727.1-205ENST00000605437 569 ntBASIC1.59□□□□□ -2.15
TNFP01375 AC005021.1-201ENST00000608730 355 ntBASIC1.59□□□□□ -2.15
TNFP01375 SDR42E1P2-201ENST00000614861 481 ntBASIC1.59□□□□□ -2.15
TNFP01375 AC104307.1-201ENST00000616142 196 ntBASIC1.59□□□□□ -2.15
TNFP01375 SDR42E1P4-201ENST00000620894 481 ntBASIC1.59□□□□□ -2.15
TNFP01375 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.59□□□□□ -2.15
TNFP01375 MFSD8-245ENST00000641743 948 ntBASIC1.59□□□□□ -2.15
TNFP01375 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC1.59□□□□□ -2.16
TNFP01375 SDAD1P2-201ENST00000441308 2028 ntBASIC1.59□□□□□ -2.16
TNFP01375 ATP5F1P6-201ENST00000402768 767 ntBASIC1.58□□□□□ -2.16
TNFP01375 PRRC2CP1-201ENST00000404428 159 ntBASIC1.58□□□□□ -2.16
TNFP01375 RNU4-62P-201ENST00000410125 130 ntBASIC1.58□□□□□ -2.16
TNFP01375 RNA5SP270-201ENST00000411361 118 ntBASIC1.58□□□□□ -2.16
TNFP01375 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC1.58□□□□□ -2.16
TNFP01375 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC1.58□□□□□ -2.16
TNFP01375 AC092155.2-201ENST00000454675 477 ntBASIC1.58□□□□□ -2.16
TNFP01375 BX248409.1-201ENST00000455497 255 ntBASIC1.58□□□□□ -2.16
TNFP01375 PNPLA4P1-201ENST00000458328 305 ntBASIC1.58□□□□□ -2.16
TNFP01375 RNA5SP233-201ENST00000459153 113 ntBASIC1.58□□□□□ -2.16
TNFP01375 HMGB3P17-201ENST00000504195 649 ntBASIC1.58□□□□□ -2.16
TNFP01375 CBX3P3-201ENST00000508108 532 ntBASIC1.58□□□□□ -2.16
TNFP01375 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC1.58□□□□□ -2.16
TNFP01375 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.58□□□□□ -2.16
TNFP01375 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC1.58□□□□□ -2.16
TNFP01375 RNU7-193P-201ENST00000516723 65 ntBASIC1.58□□□□□ -2.16
TNFP01375 AC022634.1-201ENST00000520765 532 ntBASIC1.58□□□□□ -2.16
TNFP01375 AC008562.1-201ENST00000521763 330 ntBASIC1.58□□□□□ -2.16
TNFP01375 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.58□□□□□ -2.16
TNFP01375 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC1.58□□□□□ -2.16
TNFP01375 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC1.58□□□□□ -2.16
TNFP01375 MIR4303-201ENST00000581299 66 ntBASIC1.58□□□□□ -2.16
TNFP01375 AP001004.1-201ENST00000582468 324 ntBASIC1.58□□□□□ -2.16
TNFP01375 VN1R80P-201ENST00000597126 338 ntBASIC1.58□□□□□ -2.16
TNFP01375 AC079395.3-201ENST00000615161 484 ntBASIC1.58□□□□□ -2.16
TNFP01375 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC1.58□□□□□ -2.16
TNFP01375 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
TNFP01375 RNU6-661P-201ENST00000362409 107 ntBASIC1.57□□□□□ -2.16
TNFP01375 SNORD48-201ENST00000364953 64 ntBASIC1.57□□□□□ -2.16
TNFP01375 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
TNFP01375 RN7SKP101-201ENST00000411376 320 ntBASIC1.57□□□□□ -2.16
TNFP01375 RPL23AP36-201ENST00000413895 458 ntBASIC1.57□□□□□ -2.16
TNFP01375 AL357078.2-201ENST00000416486 427 ntBASIC1.57□□□□□ -2.16
TNFP01375 BTF3P4-201ENST00000418852 495 ntBASIC1.57□□□□□ -2.16
TNFP01375 ZNF90P2-204ENST00000419323 1075 ntBASIC1.57□□□□□ -2.16
TNFP01375 OFD1P18Y-201ENST00000420889 959 ntBASIC1.57□□□□□ -2.16
TNFP01375 AL513185.2-201ENST00000425543 193 ntBASIC1.57□□□□□ -2.16
TNFP01375 AL358075.3-201ENST00000426289 226 ntBASIC1.57□□□□□ -2.16
TNFP01375 AL365496.1-201ENST00000426885 215 ntBASIC1.57□□□□□ -2.16
TNFP01375 AC079780.1-201ENST00000428259 207 ntBASIC1.57□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 130.1 ms