Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 RNY4P34-201ENST00000364779 95 ntBASIC3.23□□□□□ -1.89
SSX4O60224 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
SSX4O60224 SNORA75-201ENST00000384158 137 ntBASIC3.23□□□□□ -1.89
SSX4O60224 MIR34B-201ENST00000385076 84 ntBASIC3.23□□□□□ -1.89
SSX4O60224 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
SSX4O60224 AL591034.1-201ENST00000407447 340 ntBASIC3.23□□□□□ -1.89
SSX4O60224 RNA5SP293-201ENST00000410527 113 ntBASIC3.23□□□□□ -1.89
SSX4O60224 RNU6-248P-201ENST00000410720 107 ntBASIC3.23□□□□□ -1.89
SSX4O60224 RNU2-62P-201ENST00000410868 191 ntBASIC3.23□□□□□ -1.89
SSX4O60224 AC019097.1-201ENST00000424783 735 ntBASIC3.23□□□□□ -1.89
SSX4O60224 TRIM60P10Y-201ENST00000425589 751 ntBASIC3.23□□□□□ -1.89
SSX4O60224 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC3.23□□□□□ -1.89
SSX4O60224 RPL7L1P10-201ENST00000427790 463 ntBASIC3.23□□□□□ -1.89
SSX4O60224 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.23□□□□□ -1.89
SSX4O60224 TRIM60P8Y-201ENST00000436338 762 ntBASIC3.23□□□□□ -1.89
SSX4O60224 AL031667.1-201ENST00000440222 725 ntBASIC3.23□□□□□ -1.89
SSX4O60224 RPS3AP12-201ENST00000443616 753 ntBASIC3.23□□□□□ -1.89
SSX4O60224 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC3.23□□□□□ -1.89
SSX4O60224 MTND1P27-201ENST00000451117 902 ntBASIC3.23□□□□□ -1.89
SSX4O60224 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.23□□□□□ -1.89
SSX4O60224 MTCO2P18-201ENST00000457151 658 ntBASIC3.23□□□□□ -1.89
SSX4O60224 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC3.23□□□□□ -1.89
SSX4O60224 AL049714.1-201ENST00000466686 347 ntBASIC3.23□□□□□ -1.89
SSX4O60224 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.23□□□□□ -1.89
SSX4O60224 AC010587.1-201ENST00000505809 469 ntBASIC3.23□□□□□ -1.89
SSX4O60224 CDC42P4-201ENST00000510507 563 ntBASIC3.23□□□□□ -1.89
SSX4O60224 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC3.23□□□□□ -1.89
SSX4O60224 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.23□□□□□ -1.89
SSX4O60224 RN7SKP18-201ENST00000516005 275 ntBASIC3.23□□□□□ -1.89
SSX4O60224 RNU6-390P-201ENST00000516259 103 ntBASIC3.23□□□□□ -1.89
SSX4O60224 RNA5SP164-201ENST00000516533 110 ntBASIC3.23□□□□□ -1.89
SSX4O60224 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.23□□□□□ -1.89
SSX4O60224 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.23□□□□□ -1.89
SSX4O60224 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.23□□□□□ -1.89
SSX4O60224 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC3.23□□□□□ -1.89
SSX4O60224 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC3.23□□□□□ -1.89
SSX4O60224 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.23□□□□□ -1.89
SSX4O60224 AL355836.1-201ENST00000555951 870 ntBASIC3.23□□□□□ -1.89
SSX4O60224 AC137800.2-201ENST00000574375 120 ntBASIC3.23□□□□□ -1.89
SSX4O60224 AC015871.2-201ENST00000603605 948 ntBASIC3.23□□□□□ -1.89
SSX4O60224 AC008277.2-201ENST00000605196 797 ntBASIC3.23□□□□□ -1.89
SSX4O60224 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
SSX4O60224 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.23□□□□□ -1.89
SSX4O60224 UBE2Q2P2-203ENST00000613592 761 ntBASIC3.23□□□□□ -1.89
SSX4O60224 AC006338.1-201ENST00000618453 749 ntBASIC3.23□□□□□ -1.89
SSX4O60224 AC058791.1-201ENST00000608412 3198 ntBASIC3.23□□□□□ -1.89
SSX4O60224 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.23□□□□□ -1.89
SSX4O60224 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
SSX4O60224 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SSX4O60224 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SSX4O60224 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
SSX4O60224 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
SSX4O60224 OR1S2-201ENST00000302592 978 ntBASIC3.22□□□□□ -1.89
SSX4O60224 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.22□□□□□ -1.89
SSX4O60224 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
SSX4O60224 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
SSX4O60224 RNU5E-1-201ENST00000362477 120 ntBASIC3.22□□□□□ -1.89
SSX4O60224 RNU4-1-201ENST00000363925 141 ntBASIC3.22□□□□□ -1.89
SSX4O60224 RNA5SP42-201ENST00000364278 115 ntBASIC3.22□□□□□ -1.89
SSX4O60224 MIR218-2-201ENST00000385006 110 ntBASIC3.22□□□□□ -1.89
SSX4O60224 RPL17P50-201ENST00000396131 546 ntBASIC3.22□□□□□ -1.89
SSX4O60224 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC3.22□□□□□ -1.89
SSX4O60224 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SSX4O60224 SYF2P2-201ENST00000417620 583 ntBASIC3.22□□□□□ -1.89
SSX4O60224 AC006366.1-201ENST00000422002 759 ntBASIC3.22□□□□□ -1.89
SSX4O60224 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.22□□□□□ -1.89
SSX4O60224 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.22□□□□□ -1.89
SSX4O60224 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.22□□□□□ -1.89
SSX4O60224 Z74696.2-201ENST00000436514 498 ntBASIC3.22□□□□□ -1.89
SSX4O60224 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC3.22□□□□□ -1.89
SSX4O60224 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC3.22□□□□□ -1.89
SSX4O60224 GAPDHP17-201ENST00000449858 1001 ntBASIC3.22□□□□□ -1.89
SSX4O60224 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC3.22□□□□□ -1.89
SSX4O60224 MTND2P24-201ENST00000453434 806 ntBASIC3.22□□□□□ -1.89
SSX4O60224 MTND1P12-201ENST00000455231 147 ntBASIC3.22□□□□□ -1.89
SSX4O60224 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC3.22□□□□□ -1.89
SSX4O60224 RPS27P29-201ENST00000463110 252 ntBASIC3.22□□□□□ -1.89
SSX4O60224 RAP1BP2-201ENST00000478270 544 ntBASIC3.22□□□□□ -1.89
SSX4O60224 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC3.22□□□□□ -1.89
SSX4O60224 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.22□□□□□ -1.89
SSX4O60224 AC079140.3-201ENST00000511111 550 ntBASIC3.22□□□□□ -1.89
SSX4O60224 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC3.22□□□□□ -1.89
SSX4O60224 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC3.22□□□□□ -1.89
SSX4O60224 MIR2276-201ENST00000516886 89 ntBASIC3.22□□□□□ -1.89
SSX4O60224 AP006245.1-201ENST00000522549 120 ntBASIC3.22□□□□□ -1.89
SSX4O60224 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC3.22□□□□□ -1.89
SSX4O60224 AC024909.2-201ENST00000553035 286 ntBASIC3.22□□□□□ -1.89
SSX4O60224 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.22□□□□□ -1.89
SSX4O60224 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC3.22□□□□□ -1.89
SSX4O60224 MIR5187-201ENST00000583479 76 ntBASIC3.22□□□□□ -1.89
SSX4O60224 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC3.22□□□□□ -1.89
SSX4O60224 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.22□□□□□ -1.89
SSX4O60224 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.22□□□□□ -1.89
SSX4O60224 AP000860.1-201ENST00000605250 559 ntBASIC3.22□□□□□ -1.89
SSX4O60224 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
SSX4O60224 SDR42E1P2-201ENST00000614861 481 ntBASIC3.22□□□□□ -1.89
SSX4O60224 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC3.22□□□□□ -1.89
SSX4O60224 SNHG22-203ENST00000617833 660 ntBASIC3.22□□□□□ -1.89
SSX4O60224 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
SSX4O60224 AC009509.4-201ENST00000619202 509 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms