Protein–RNA interactions for Protein: A6NGB9

WIPF3, WAS/WASL-interacting protein family member 3, humanhuman

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WIPF3A6NGB9 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.84□□□□□ -1.79
WIPF3A6NGB9 AL669831.4-202ENST00000590817 238 ntBASIC3.84□□□□□ -1.79
WIPF3A6NGB9 AC019176.2-201ENST00000611579 315 ntBASIC3.84□□□□□ -1.79
WIPF3A6NGB9 AC093838.1-201ENST00000613014 469 ntBASIC3.84□□□□□ -1.79
WIPF3A6NGB9 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.84□□□□□ -1.79
WIPF3A6NGB9 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.84□□□□□ -1.79
WIPF3A6NGB9 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.84□□□□□ -1.79
WIPF3A6NGB9 ASNSP3-201ENST00000451989 1306 ntBASIC3.84□□□□□ -1.79
WIPF3A6NGB9 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
WIPF3A6NGB9 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC3.84□□□□□ -1.8
WIPF3A6NGB9 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC3.84□□□□□ -1.8
WIPF3A6NGB9 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
WIPF3A6NGB9 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
WIPF3A6NGB9 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
WIPF3A6NGB9 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC3.83□□□□□ -1.8
WIPF3A6NGB9 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
WIPF3A6NGB9 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
WIPF3A6NGB9 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
WIPF3A6NGB9 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.83□□□□□ -1.8
WIPF3A6NGB9 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
WIPF3A6NGB9 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
WIPF3A6NGB9 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
WIPF3A6NGB9 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
WIPF3A6NGB9 RNA5SP502-201ENST00000362694 119 ntBASIC3.83□□□□□ -1.8
WIPF3A6NGB9 RNA5SP124-201ENST00000362739 110 ntBASIC3.83□□□□□ -1.8
WIPF3A6NGB9 RNA5SP258-201ENST00000362750 119 ntBASIC3.83□□□□□ -1.8
WIPF3A6NGB9 RNU1-14P-201ENST00000362759 152 ntBASIC3.83□□□□□ -1.8
WIPF3A6NGB9 Y_RNA.202-201ENST00000364083 110 ntBASIC3.83□□□□□ -1.8
WIPF3A6NGB9 Y_RNA.234-201ENST00000364409 97 ntBASIC3.83□□□□□ -1.8
WIPF3A6NGB9 RNU6-1297P-201ENST00000384415 104 ntBASIC3.83□□□□□ -1.8
WIPF3A6NGB9 RNU6-1160P-201ENST00000384546 104 ntBASIC3.83□□□□□ -1.8
WIPF3A6NGB9 MIR559-201ENST00000385188 96 ntBASIC3.83□□□□□ -1.8
WIPF3A6NGB9 SNORA75.4-201ENST00000391278 119 ntBASIC3.83□□□□□ -1.8
WIPF3A6NGB9 RNU4-26P-201ENST00000410270 107 ntBASIC3.83□□□□□ -1.8
WIPF3A6NGB9 RAB9AP3-201ENST00000412737 573 ntBASIC3.83□□□□□ -1.8
WIPF3A6NGB9 HSPE1P1-201ENST00000421494 318 ntBASIC3.83□□□□□ -1.8
WIPF3A6NGB9 BEND7P1-201ENST00000422058 457 ntBASIC3.83□□□□□ -1.8
WIPF3A6NGB9 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
WIPF3A6NGB9 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.83□□□□□ -1.8
WIPF3A6NGB9 RPL7P52-201ENST00000449200 742 ntBASIC3.83□□□□□ -1.8
WIPF3A6NGB9 RAB9AP1-201ENST00000449393 573 ntBASIC3.83□□□□□ -1.8
WIPF3A6NGB9 MTND3P16-201ENST00000452205 344 ntBASIC3.83□□□□□ -1.8
WIPF3A6NGB9 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.83□□□□□ -1.8
WIPF3A6NGB9 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.83□□□□□ -1.8
WIPF3A6NGB9 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC3.83□□□□□ -1.8
WIPF3A6NGB9 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.83□□□□□ -1.8
WIPF3A6NGB9 AC021146.1-201ENST00000511202 716 ntBASIC3.83□□□□□ -1.8
WIPF3A6NGB9 RNU4ATAC8P-201ENST00000516196 109 ntBASIC3.83□□□□□ -1.8
WIPF3A6NGB9 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.83□□□□□ -1.8
WIPF3A6NGB9 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC3.83□□□□□ -1.8
WIPF3A6NGB9 AC011979.2-201ENST00000527568 352 ntBASIC3.83□□□□□ -1.8
WIPF3A6NGB9 AC107016.1-201ENST00000550463 337 ntBASIC3.83□□□□□ -1.8
WIPF3A6NGB9 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.83□□□□□ -1.8
WIPF3A6NGB9 AC026464.5-201ENST00000562497 722 ntBASIC3.83□□□□□ -1.8
WIPF3A6NGB9 RPL23AP97-201ENST00000568955 471 ntBASIC3.83□□□□□ -1.8
WIPF3A6NGB9 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
WIPF3A6NGB9 AC060771.1-201ENST00000582031 164 ntBASIC3.83□□□□□ -1.8
WIPF3A6NGB9 MIR3124-201ENST00000582636 67 ntBASIC3.83□□□□□ -1.8
WIPF3A6NGB9 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC3.83□□□□□ -1.8
WIPF3A6NGB9 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.83□□□□□ -1.8
WIPF3A6NGB9 AC021646.1-201ENST00000605469 484 ntBASIC3.83□□□□□ -1.8
WIPF3A6NGB9 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC3.83□□□□□ -1.8
WIPF3A6NGB9 AL138721.1-201ENST00000616756 179 ntBASIC3.83□□□□□ -1.8
WIPF3A6NGB9 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC3.83□□□□□ -1.8
WIPF3A6NGB9 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
WIPF3A6NGB9 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
WIPF3A6NGB9 AC139769.1-204ENST00000472297 1931 ntBASIC3.83□□□□□ -1.8
WIPF3A6NGB9 AC116096.1-201ENST00000566804 2314 ntBASIC3.83□□□□□ -1.8
WIPF3A6NGB9 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC3.83□□□□□ -1.8
WIPF3A6NGB9 AC016588.2-201ENST00000632484 3021 ntBASIC3.83□□□□□ -1.8
WIPF3A6NGB9 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC3.83□□□□□ -1.8
WIPF3A6NGB9 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
WIPF3A6NGB9 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC3.83□□□□□ -1.8
WIPF3A6NGB9 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC3.83□□□□□ -1.8
WIPF3A6NGB9 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
WIPF3A6NGB9 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
WIPF3A6NGB9 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
WIPF3A6NGB9 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
WIPF3A6NGB9 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
WIPF3A6NGB9 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
WIPF3A6NGB9 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.82□□□□□ -1.8
WIPF3A6NGB9 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC3.82□□□□□ -1.8
WIPF3A6NGB9 AC073346.2-201ENST00000624724 2058 ntBASIC3.82□□□□□ -1.8
WIPF3A6NGB9 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
WIPF3A6NGB9 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.82□□□□□ -1.8
WIPF3A6NGB9 AC027287.1-201ENST00000553115 1453 ntBASIC3.82□□□□□ -1.8
WIPF3A6NGB9 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
WIPF3A6NGB9 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC3.82□□□□□ -1.8
WIPF3A6NGB9 Y_RNA.132-201ENST00000363421 102 ntBASIC3.82□□□□□ -1.8
WIPF3A6NGB9 SNORA63C-201ENST00000364578 129 ntBASIC3.82□□□□□ -1.8
WIPF3A6NGB9 Y_RNA.367-201ENST00000365544 101 ntBASIC3.82□□□□□ -1.8
WIPF3A6NGB9 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
WIPF3A6NGB9 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC3.82□□□□□ -1.8
WIPF3A6NGB9 Y_RNA.493-201ENST00000384422 102 ntBASIC3.82□□□□□ -1.8
WIPF3A6NGB9 MIR513A2-201ENST00000385249 127 ntBASIC3.82□□□□□ -1.8
WIPF3A6NGB9 Y_RNA.579-201ENST00000390939 94 ntBASIC3.82□□□□□ -1.8
WIPF3A6NGB9 RNU2-62P-201ENST00000410868 191 ntBASIC3.82□□□□□ -1.8
WIPF3A6NGB9 MAP1LC3BP1-201ENST00000417653 379 ntBASIC3.82□□□□□ -1.8
WIPF3A6NGB9 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC3.82□□□□□ -1.8
WIPF3A6NGB9 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms