Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.9□□□□□ -1.46
RCCD1A6NED2 AC079905.1-201ENST00000549280 475 ntBASIC5.9□□□□□ -1.46
RCCD1A6NED2 CYCSP38-201ENST00000559840 322 ntBASIC5.9□□□□□ -1.46
RCCD1A6NED2 AC008507.3-201ENST00000585753 472 ntBASIC5.9□□□□□ -1.46
RCCD1A6NED2 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC5.9□□□□□ -1.46
RCCD1A6NED2 AC025574.2-201ENST00000615621 514 ntBASIC5.9□□□□□ -1.46
RCCD1A6NED2 AC090617.7-201ENST00000623952 126 ntBASIC5.9□□□□□ -1.46
RCCD1A6NED2 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.9□□□□□ -1.47
RCCD1A6NED2 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC5.9□□□□□ -1.47
RCCD1A6NED2 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
RCCD1A6NED2 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
RCCD1A6NED2 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC5.89□□□□□ -1.47
RCCD1A6NED2 AC233981.2-201ENST00000611524 1614 ntBASIC5.89□□□□□ -1.47
RCCD1A6NED2 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
RCCD1A6NED2 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
RCCD1A6NED2 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.89□□□□□ -1.47
RCCD1A6NED2 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
RCCD1A6NED2 RNU6-879P-201ENST00000364328 108 ntBASIC5.89□□□□□ -1.47
RCCD1A6NED2 RNA5SP433-201ENST00000364491 114 ntBASIC5.89□□□□□ -1.47
RCCD1A6NED2 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC5.89□□□□□ -1.47
RCCD1A6NED2 RNU6-843P-201ENST00000384454 104 ntBASIC5.89□□□□□ -1.47
RCCD1A6NED2 SNORA46.1-201ENST00000391069 153 ntBASIC5.89□□□□□ -1.47
RCCD1A6NED2 BTF3L4P2-201ENST00000392798 346 ntBASIC5.89□□□□□ -1.47
RCCD1A6NED2 RPS4XP3-201ENST00000398541 413 ntBASIC5.89□□□□□ -1.47
RCCD1A6NED2 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
RCCD1A6NED2 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC5.89□□□□□ -1.47
RCCD1A6NED2 MAP1LC3BP1-201ENST00000417653 379 ntBASIC5.89□□□□□ -1.47
RCCD1A6NED2 AP000907.1-201ENST00000428428 510 ntBASIC5.89□□□□□ -1.47
RCCD1A6NED2 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
RCCD1A6NED2 RPS15AP7-201ENST00000439294 405 ntBASIC5.89□□□□□ -1.47
RCCD1A6NED2 CEACAMP7-201ENST00000444105 496 ntBASIC5.89□□□□□ -1.47
RCCD1A6NED2 AC009963.3-201ENST00000458090 486 ntBASIC5.89□□□□□ -1.47
RCCD1A6NED2 SNORD2.1-201ENST00000458762 69 ntBASIC5.89□□□□□ -1.47
RCCD1A6NED2 RPS23P6-201ENST00000466136 431 ntBASIC5.89□□□□□ -1.47
RCCD1A6NED2 HSPE1P6-201ENST00000479457 291 ntBASIC5.89□□□□□ -1.47
RCCD1A6NED2 AC140059.1-201ENST00000489238 361 ntBASIC5.89□□□□□ -1.47
RCCD1A6NED2 AL160314.1-201ENST00000490836 438 ntBASIC5.89□□□□□ -1.47
RCCD1A6NED2 HMGB3P16-201ENST00000508037 287 ntBASIC5.89□□□□□ -1.47
RCCD1A6NED2 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC5.89□□□□□ -1.47
RCCD1A6NED2 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
RCCD1A6NED2 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC5.89□□□□□ -1.47
RCCD1A6NED2 NDUFB4P11-201ENST00000560510 395 ntBASIC5.89□□□□□ -1.47
RCCD1A6NED2 AC022968.1-201ENST00000567372 442 ntBASIC5.89□□□□□ -1.47
RCCD1A6NED2 MIR4308-201ENST00000580634 81 ntBASIC5.89□□□□□ -1.47
RCCD1A6NED2 MIR4423-201ENST00000580922 80 ntBASIC5.89□□□□□ -1.47
RCCD1A6NED2 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC5.89□□□□□ -1.47
RCCD1A6NED2 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC5.89□□□□□ -1.47
RCCD1A6NED2 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC5.89□□□□□ -1.47
RCCD1A6NED2 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.89□□□□□ -1.47
RCCD1A6NED2 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC5.89□□□□□ -1.47
RCCD1A6NED2 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
RCCD1A6NED2 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
RCCD1A6NED2 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
RCCD1A6NED2 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
RCCD1A6NED2 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
RCCD1A6NED2 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
RCCD1A6NED2 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC5.88□□□□□ -1.47
RCCD1A6NED2 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
RCCD1A6NED2 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
RCCD1A6NED2 AC009812.4-201ENST00000569134 1805 ntBASIC5.88□□□□□ -1.47
RCCD1A6NED2 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC5.88□□□□□ -1.47
RCCD1A6NED2 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.88□□□□□ -1.47
RCCD1A6NED2 MIR410-201ENST00000362222 80 ntBASIC5.88□□□□□ -1.47
RCCD1A6NED2 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC5.88□□□□□ -1.47
RCCD1A6NED2 RNU6-17P-201ENST00000384245 107 ntBASIC5.88□□□□□ -1.47
RCCD1A6NED2 RNU6-318P-201ENST00000384283 103 ntBASIC5.88□□□□□ -1.47
RCCD1A6NED2 RNU6-18P-201ENST00000384527 107 ntBASIC5.88□□□□□ -1.47
RCCD1A6NED2 Y_RNA.568-201ENST00000384742 113 ntBASIC5.88□□□□□ -1.47
RCCD1A6NED2 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
RCCD1A6NED2 HMGN1P20-201ENST00000411849 300 ntBASIC5.88□□□□□ -1.47
RCCD1A6NED2 GAS5-208ENST00000425771 242 ntTSL 3 BASIC5.88□□□□□ -1.47
RCCD1A6NED2 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC5.88□□□□□ -1.47
RCCD1A6NED2 AL162725.1-201ENST00000435405 301 ntBASIC5.88□□□□□ -1.47
RCCD1A6NED2 AL590399.6-201ENST00000446396 307 ntBASIC5.88□□□□□ -1.47
RCCD1A6NED2 AC073901.1-201ENST00000462471 408 ntBASIC5.88□□□□□ -1.47
RCCD1A6NED2 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.88□□□□□ -1.47
RCCD1A6NED2 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.88□□□□□ -1.47
RCCD1A6NED2 AC006427.1-201ENST00000514359 712 ntBASIC5.88□□□□□ -1.47
RCCD1A6NED2 AC027369.5-201ENST00000533838 755 ntBASIC5.88□□□□□ -1.47
RCCD1A6NED2 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC5.88□□□□□ -1.47
RCCD1A6NED2 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC5.88□□□□□ -1.47
RCCD1A6NED2 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
RCCD1A6NED2 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.88□□□□□ -1.47
RCCD1A6NED2 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
RCCD1A6NED2 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.88□□□□□ -1.47
RCCD1A6NED2 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.88□□□□□ -1.47
RCCD1A6NED2 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
RCCD1A6NED2 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
RCCD1A6NED2 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
RCCD1A6NED2 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC5.87□□□□□ -1.47
RCCD1A6NED2 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
RCCD1A6NED2 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
RCCD1A6NED2 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
RCCD1A6NED2 OR9K1P-202ENST00000641111 3217 ntBASIC5.87□□□□□ -1.47
RCCD1A6NED2 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
RCCD1A6NED2 Y_RNA.488-201ENST00000384403 102 ntBASIC5.87□□□□□ -1.47
RCCD1A6NED2 MIR34A-201ENST00000385130 110 ntBASIC5.87□□□□□ -1.47
RCCD1A6NED2 RNU6-131P-201ENST00000391144 107 ntBASIC5.87□□□□□ -1.47
RCCD1A6NED2 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC5.87□□□□□ -1.47
RCCD1A6NED2 AC009296.1-201ENST00000443146 155 ntBASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms