Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 AC008427.1-201ENST00000503102 655 ntBASIC1.58□□□□□ -2.16
TCRBV4S1A1TA0A5B7 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC1.58□□□□□ -2.16
TCRBV4S1A1TA0A5B7 FAM92A1P1-201ENST00000528023 890 ntBASIC1.58□□□□□ -2.16
TCRBV4S1A1TA0A5B7 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC1.58□□□□□ -2.16
TCRBV4S1A1TA0A5B7 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC1.58□□□□□ -2.16
TCRBV4S1A1TA0A5B7 LSM6P2-201ENST00000552208 177 ntBASIC1.58□□□□□ -2.16
TCRBV4S1A1TA0A5B7 TRAV28-201ENST00000557548 323 ntBASIC1.58□□□□□ -2.16
TCRBV4S1A1TA0A5B7 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC1.58□□□□□ -2.16
TCRBV4S1A1TA0A5B7 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC1.58□□□□□ -2.16
TCRBV4S1A1TA0A5B7 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.58□□□□□ -2.16
TCRBV4S1A1TA0A5B7 AL020997.3-201ENST00000602843 359 ntBASIC1.58□□□□□ -2.16
TCRBV4S1A1TA0A5B7 BNIP3P4-201ENST00000604946 565 ntBASIC1.58□□□□□ -2.16
TCRBV4S1A1TA0A5B7 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC1.58□□□□□ -2.16
TCRBV4S1A1TA0A5B7 HMGB1P24-202ENST00000615653 685 ntBASIC1.58□□□□□ -2.16
TCRBV4S1A1TA0A5B7 AC025588.4-201ENST00000615802 908 ntBASIC1.58□□□□□ -2.16
TCRBV4S1A1TA0A5B7 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC1.58□□□□□ -2.16
TCRBV4S1A1TA0A5B7 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.58□□□□□ -2.16
TCRBV4S1A1TA0A5B7 PSMD5-AS1-215ENST00000640622 205 ntBASIC1.58□□□□□ -2.16
TCRBV4S1A1TA0A5B7 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC1.57□□□□□ -2.16
TCRBV4S1A1TA0A5B7 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC1.57□□□□□ -2.16
TCRBV4S1A1TA0A5B7 ZBTB8OSP1-201ENST00000342688 498 ntBASIC1.57□□□□□ -2.16
TCRBV4S1A1TA0A5B7 RNU6-77P-201ENST00000410554 91 ntBASIC1.57□□□□□ -2.16
TCRBV4S1A1TA0A5B7 TATDN1P1-201ENST00000414123 891 ntBASIC1.57□□□□□ -2.16
TCRBV4S1A1TA0A5B7 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC1.57□□□□□ -2.16
TCRBV4S1A1TA0A5B7 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC1.57□□□□□ -2.16
TCRBV4S1A1TA0A5B7 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC1.57□□□□□ -2.16
TCRBV4S1A1TA0A5B7 ARPC3P1-201ENST00000437218 533 ntBASIC1.57□□□□□ -2.16
TCRBV4S1A1TA0A5B7 AL714022.1-201ENST00000439897 151 ntBASIC1.57□□□□□ -2.16
TCRBV4S1A1TA0A5B7 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.57□□□□□ -2.16
TCRBV4S1A1TA0A5B7 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.57□□□□□ -2.16
TCRBV4S1A1TA0A5B7 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC1.57□□□□□ -2.16
TCRBV4S1A1TA0A5B7 MTCYBP3-201ENST00000445588 1137 ntBASIC1.57□□□□□ -2.16
TCRBV4S1A1TA0A5B7 HGF-207ENST00000453018 721 ntTSL 3 BASIC1.57□□□□□ -2.16
TCRBV4S1A1TA0A5B7 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC1.57□□□□□ -2.16
TCRBV4S1A1TA0A5B7 AC233279.1-201ENST00000455300 423 ntBASIC1.57□□□□□ -2.16
TCRBV4S1A1TA0A5B7 AC116337.2-201ENST00000477662 156 ntBASIC1.57□□□□□ -2.16
TCRBV4S1A1TA0A5B7 RPL31P60-201ENST00000478450 367 ntBASIC1.57□□□□□ -2.16
TCRBV4S1A1TA0A5B7 AL135752.1-201ENST00000479477 471 ntBASIC1.57□□□□□ -2.16
TCRBV4S1A1TA0A5B7 AC104108.1-201ENST00000509930 412 ntBASIC1.57□□□□□ -2.16
TCRBV4S1A1TA0A5B7 MRPS36P2-201ENST00000512569 299 ntBASIC1.57□□□□□ -2.16
TCRBV4S1A1TA0A5B7 MIR514B-201ENST00000516774 80 ntBASIC1.57□□□□□ -2.16
TCRBV4S1A1TA0A5B7 RNU6-928P-201ENST00000516876 104 ntBASIC1.57□□□□□ -2.16
TCRBV4S1A1TA0A5B7 RNU6-295P-201ENST00000516901 104 ntBASIC1.57□□□□□ -2.16
TCRBV4S1A1TA0A5B7 RNU6-798P-201ENST00000516912 103 ntBASIC1.57□□□□□ -2.16
TCRBV4S1A1TA0A5B7 IGJP1-201ENST00000522682 475 ntBASIC1.57□□□□□ -2.16
TCRBV4S1A1TA0A5B7 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC1.57□□□□□ -2.16
TCRBV4S1A1TA0A5B7 OR5AQ1P-201ENST00000527596 927 ntBASIC1.57□□□□□ -2.16
TCRBV4S1A1TA0A5B7 AL138976.2-201ENST00000563989 694 ntBASIC1.57□□□□□ -2.16
TCRBV4S1A1TA0A5B7 ANKRD36BP2-206ENST00000575193 1245 ntBASIC1.57□□□□□ -2.16
TCRBV4S1A1TA0A5B7 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC1.57□□□□□ -2.16
TCRBV4S1A1TA0A5B7 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC1.57□□□□□ -2.16
TCRBV4S1A1TA0A5B7 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.57□□□□□ -2.16
TCRBV4S1A1TA0A5B7 AP002826.1-201ENST00000608835 315 ntBASIC1.57□□□□□ -2.16
TCRBV4S1A1TA0A5B7 AC093673.2-201ENST00000609674 331 ntBASIC1.57□□□□□ -2.16
TCRBV4S1A1TA0A5B7 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC1.57□□□□□ -2.16
TCRBV4S1A1TA0A5B7 AC009318.2-201ENST00000610917 651 ntBASIC1.57□□□□□ -2.16
TCRBV4S1A1TA0A5B7 AC009090.3-201ENST00000616553 565 ntBASIC1.57□□□□□ -2.16
TCRBV4S1A1TA0A5B7 AC241585.2-209ENST00000638217 143 ntBASIC1.57□□□□□ -2.16
TCRBV4S1A1TA0A5B7 ZNF663P-202ENST00000641770 1131 ntBASIC1.57□□□□□ -2.16
TCRBV4S1A1TA0A5B7 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.57□□□□□ -2.16
TCRBV4S1A1TA0A5B7 MTND4P35-201ENST00000604257 1375 ntBASIC1.57□□□□□ -2.16
TCRBV4S1A1TA0A5B7 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.57□□□□□ -2.16
TCRBV4S1A1TA0A5B7 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC1.57□□□□□ -2.16
TCRBV4S1A1TA0A5B7 AC009812.4-201ENST00000569134 1805 ntBASIC1.56□□□□□ -2.16
TCRBV4S1A1TA0A5B7 AC008568.2-201ENST00000623862 2313 ntBASIC1.56□□□□□ -2.16
TCRBV4S1A1TA0A5B7 TPTE2P4-201ENST00000258589 1605 ntBASIC1.56□□□□□ -2.16
TCRBV4S1A1TA0A5B7 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.56□□□□□ -2.16
TCRBV4S1A1TA0A5B7 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC1.56□□□□□ -2.16
TCRBV4S1A1TA0A5B7 SNORA68.1-201ENST00000364537 132 ntBASIC1.56□□□□□ -2.16
TCRBV4S1A1TA0A5B7 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
TCRBV4S1A1TA0A5B7 RNU6-882P-201ENST00000391025 103 ntBASIC1.56□□□□□ -2.16
TCRBV4S1A1TA0A5B7 RNA5SP354-201ENST00000391247 136 ntBASIC1.56□□□□□ -2.16
TCRBV4S1A1TA0A5B7 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC1.56□□□□□ -2.16
TCRBV4S1A1TA0A5B7 SUMO2P12-201ENST00000405924 140 ntBASIC1.56□□□□□ -2.16
TCRBV4S1A1TA0A5B7 AL023807.1-201ENST00000407932 359 ntBASIC1.56□□□□□ -2.16
TCRBV4S1A1TA0A5B7 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC1.56□□□□□ -2.16
TCRBV4S1A1TA0A5B7 AL030996.1-201ENST00000411430 235 ntBASIC1.56□□□□□ -2.16
TCRBV4S1A1TA0A5B7 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.56□□□□□ -2.16
TCRBV4S1A1TA0A5B7 ARL2BPP3-201ENST00000421226 480 ntBASIC1.56□□□□□ -2.16
TCRBV4S1A1TA0A5B7 RPL27AP8-201ENST00000424277 446 ntBASIC1.56□□□□□ -2.16
TCRBV4S1A1TA0A5B7 AL009174.1-201ENST00000426577 416 ntBASIC1.56□□□□□ -2.16
TCRBV4S1A1TA0A5B7 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC1.56□□□□□ -2.16
TCRBV4S1A1TA0A5B7 OR4K11P-201ENST00000431829 904 ntBASIC1.56□□□□□ -2.16
TCRBV4S1A1TA0A5B7 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC1.56□□□□□ -2.16
TCRBV4S1A1TA0A5B7 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC1.56□□□□□ -2.16
TCRBV4S1A1TA0A5B7 AC090774.1-201ENST00000435925 246 ntBASIC1.56□□□□□ -2.16
TCRBV4S1A1TA0A5B7 RPL7P54-201ENST00000438336 674 ntBASIC1.56□□□□□ -2.16
TCRBV4S1A1TA0A5B7 CCNB1IP1P3-201ENST00000454702 829 ntBASIC1.56□□□□□ -2.16
TCRBV4S1A1TA0A5B7 AC087588.1-201ENST00000462203 316 ntBASIC1.56□□□□□ -2.16
TCRBV4S1A1TA0A5B7 AC107626.1-201ENST00000471084 183 ntBASIC1.56□□□□□ -2.16
TCRBV4S1A1TA0A5B7 AC093767.1-201ENST00000504523 156 ntBASIC1.56□□□□□ -2.16
TCRBV4S1A1TA0A5B7 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
TCRBV4S1A1TA0A5B7 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC1.56□□□□□ -2.16
TCRBV4S1A1TA0A5B7 RNU6-416P-201ENST00000516265 103 ntBASIC1.56□□□□□ -2.16
TCRBV4S1A1TA0A5B7 HMGB1P1-201ENST00000522557 636 ntBASIC1.56□□□□□ -2.16
TCRBV4S1A1TA0A5B7 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC1.56□□□□□ -2.16
TCRBV4S1A1TA0A5B7 OR5AK1P-201ENST00000524837 922 ntBASIC1.56□□□□□ -2.16
TCRBV4S1A1TA0A5B7 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC1.56□□□□□ -2.16
TCRBV4S1A1TA0A5B7 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC1.56□□□□□ -2.16
TCRBV4S1A1TA0A5B7 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC1.56□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms