Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
PCDHGA11Q9Y5H2 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC5.3□□□□□ -1.56
PCDHGA11Q9Y5H2 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.3□□□□□ -1.56
PCDHGA11Q9Y5H2 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
PCDHGA11Q9Y5H2 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
PCDHGA11Q9Y5H2 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC5.29□□□□□ -1.56
PCDHGA11Q9Y5H2 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.29□□□□□ -1.56
PCDHGA11Q9Y5H2 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
PCDHGA11Q9Y5H2 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
PCDHGA11Q9Y5H2 AL139811.1-201ENST00000424779 2299 ntBASIC5.29□□□□□ -1.56
PCDHGA11Q9Y5H2 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
PCDHGA11Q9Y5H2 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
PCDHGA11Q9Y5H2 DEFB108F-201ENST00000344638 222 ntBASIC5.29□□□□□ -1.56
PCDHGA11Q9Y5H2 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.29□□□□□ -1.56
PCDHGA11Q9Y5H2 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC5.29□□□□□ -1.56
PCDHGA11Q9Y5H2 RNA5SP296-201ENST00000410523 111 ntBASIC5.29□□□□□ -1.56
PCDHGA11Q9Y5H2 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC5.29□□□□□ -1.56
PCDHGA11Q9Y5H2 SDHDP6-201ENST00000414693 480 ntBASIC5.29□□□□□ -1.56
PCDHGA11Q9Y5H2 BMS1P17-202ENST00000416720 316 ntBASIC5.29□□□□□ -1.56
PCDHGA11Q9Y5H2 RPS3P2-201ENST00000421346 701 ntBASIC5.29□□□□□ -1.56
PCDHGA11Q9Y5H2 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC5.29□□□□□ -1.56
PCDHGA11Q9Y5H2 OR6D1P-201ENST00000436165 939 ntBASIC5.29□□□□□ -1.56
PCDHGA11Q9Y5H2 TDGF1P1-201ENST00000445734 527 ntBASIC5.29□□□□□ -1.56
PCDHGA11Q9Y5H2 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
PCDHGA11Q9Y5H2 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC5.29□□□□□ -1.56
PCDHGA11Q9Y5H2 AP000797.2-201ENST00000475768 606 ntBASIC5.29□□□□□ -1.56
PCDHGA11Q9Y5H2 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.29□□□□□ -1.56
PCDHGA11Q9Y5H2 AC108145.1-201ENST00000503770 153 ntBASIC5.29□□□□□ -1.56
PCDHGA11Q9Y5H2 RNU5B-3P-201ENST00000516601 115 ntBASIC5.29□□□□□ -1.56
PCDHGA11Q9Y5H2 AC084851.1-201ENST00000529105 249 ntBASIC5.29□□□□□ -1.56
PCDHGA11Q9Y5H2 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC5.29□□□□□ -1.56
PCDHGA11Q9Y5H2 AC010547.6-201ENST00000571789 193 ntBASIC5.29□□□□□ -1.56
PCDHGA11Q9Y5H2 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC5.29□□□□□ -1.56
PCDHGA11Q9Y5H2 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
PCDHGA11Q9Y5H2 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.29□□□□□ -1.56
PCDHGA11Q9Y5H2 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
PCDHGA11Q9Y5H2 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
PCDHGA11Q9Y5H2 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.29□□□□□ -1.56
PCDHGA11Q9Y5H2 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.29□□□□□ -1.56
PCDHGA11Q9Y5H2 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
PCDHGA11Q9Y5H2 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.29□□□□□ -1.56
PCDHGA11Q9Y5H2 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PCDHGA11Q9Y5H2 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PCDHGA11Q9Y5H2 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.28□□□□□ -1.56
PCDHGA11Q9Y5H2 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC5.28□□□□□ -1.56
PCDHGA11Q9Y5H2 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
PCDHGA11Q9Y5H2 RNU1-35P-201ENST00000362782 153 ntBASIC5.28□□□□□ -1.56
PCDHGA11Q9Y5H2 Y_RNA.105-201ENST00000363182 111 ntBASIC5.28□□□□□ -1.56
PCDHGA11Q9Y5H2 Y_RNA.352-201ENST00000365439 102 ntBASIC5.28□□□□□ -1.56
PCDHGA11Q9Y5H2 MIR514A1-201ENST00000385133 98 ntBASIC5.28□□□□□ -1.56
PCDHGA11Q9Y5H2 RNU6-121P-201ENST00000410525 99 ntBASIC5.28□□□□□ -1.56
PCDHGA11Q9Y5H2 RNU6-130P-201ENST00000411112 103 ntBASIC5.28□□□□□ -1.56
PCDHGA11Q9Y5H2 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.28□□□□□ -1.56
PCDHGA11Q9Y5H2 SDAD1P3-201ENST00000427380 333 ntBASIC5.28□□□□□ -1.56
PCDHGA11Q9Y5H2 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.28□□□□□ -1.56
PCDHGA11Q9Y5H2 MYL8P-204ENST00000431574 518 ntBASIC5.28□□□□□ -1.56
PCDHGA11Q9Y5H2 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC5.28□□□□□ -1.56
PCDHGA11Q9Y5H2 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC5.28□□□□□ -1.56
PCDHGA11Q9Y5H2 RPL21P13-201ENST00000488305 481 ntBASIC5.28□□□□□ -1.56
PCDHGA11Q9Y5H2 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC5.28□□□□□ -1.56
PCDHGA11Q9Y5H2 SNORD46.2-201ENST00000516021 102 ntBASIC5.28□□□□□ -1.56
PCDHGA11Q9Y5H2 AC022868.1-201ENST00000517767 391 ntBASIC5.28□□□□□ -1.56
PCDHGA11Q9Y5H2 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC5.28□□□□□ -1.56
PCDHGA11Q9Y5H2 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC5.28□□□□□ -1.56
PCDHGA11Q9Y5H2 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC5.28□□□□□ -1.56
PCDHGA11Q9Y5H2 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.28□□□□□ -1.56
PCDHGA11Q9Y5H2 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC5.28□□□□□ -1.56
PCDHGA11Q9Y5H2 AC012616.1-201ENST00000600294 197 ntBASIC5.28□□□□□ -1.56
PCDHGA11Q9Y5H2 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.28□□□□□ -1.56
PCDHGA11Q9Y5H2 AP001282.2-201ENST00000616149 309 ntBASIC5.28□□□□□ -1.56
PCDHGA11Q9Y5H2 AL731566.2-201ENST00000618971 317 ntBASIC5.28□□□□□ -1.56
PCDHGA11Q9Y5H2 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC5.28□□□□□ -1.56
PCDHGA11Q9Y5H2 MIR1910-201ENST00000636955 80 ntBASIC5.28□□□□□ -1.56
PCDHGA11Q9Y5H2 AC009643.2-201ENST00000603543 1448 ntBASIC5.28□□□□□ -1.56
PCDHGA11Q9Y5H2 ASNSP1-201ENST00000518311 1939 ntBASIC5.28□□□□□ -1.56
PCDHGA11Q9Y5H2 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PCDHGA11Q9Y5H2 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PCDHGA11Q9Y5H2 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC5.28□□□□□ -1.56
PCDHGA11Q9Y5H2 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
PCDHGA11Q9Y5H2 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PCDHGA11Q9Y5H2 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC5.28□□□□□ -1.56
PCDHGA11Q9Y5H2 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PCDHGA11Q9Y5H2 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PCDHGA11Q9Y5H2 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PCDHGA11Q9Y5H2 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
PCDHGA11Q9Y5H2 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PCDHGA11Q9Y5H2 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PCDHGA11Q9Y5H2 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.27□□□□□ -1.57
PCDHGA11Q9Y5H2 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
PCDHGA11Q9Y5H2 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PCDHGA11Q9Y5H2 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PCDHGA11Q9Y5H2 Y_RNA.180-201ENST00000363867 113 ntBASIC5.27□□□□□ -1.57
PCDHGA11Q9Y5H2 RNU6-280P-201ENST00000364145 104 ntBASIC5.27□□□□□ -1.57
PCDHGA11Q9Y5H2 Y_RNA.270-201ENST00000364693 104 ntBASIC5.27□□□□□ -1.57
PCDHGA11Q9Y5H2 RNU6-384P-201ENST00000364900 104 ntBASIC5.27□□□□□ -1.57
PCDHGA11Q9Y5H2 Y_RNA.439-201ENST00000384119 94 ntBASIC5.27□□□□□ -1.57
PCDHGA11Q9Y5H2 Y_RNA.458-201ENST00000384240 102 ntBASIC5.27□□□□□ -1.57
PCDHGA11Q9Y5H2 RNA5SP122-201ENST00000384457 108 ntBASIC5.27□□□□□ -1.57
PCDHGA11Q9Y5H2 RNA5SP284-201ENST00000384547 118 ntBASIC5.27□□□□□ -1.57
PCDHGA11Q9Y5H2 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms