Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
CNTN3Q9P232 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
CNTN3Q9P232 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
CNTN3Q9P232 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CNTN3Q9P232 MIR135A2-201ENST00000384854 100 ntBASIC5.24□□□□□ -1.57
CNTN3Q9P232 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CNTN3Q9P232 AL645608.4-201ENST00000423619 154 ntBASIC5.24□□□□□ -1.57
CNTN3Q9P232 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC5.24□□□□□ -1.57
CNTN3Q9P232 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CNTN3Q9P232 CKS1BP5-201ENST00000434172 273 ntBASIC5.24□□□□□ -1.57
CNTN3Q9P232 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC5.24□□□□□ -1.57
CNTN3Q9P232 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC5.24□□□□□ -1.57
CNTN3Q9P232 AC092436.3-201ENST00000511788 257 ntBASIC5.24□□□□□ -1.57
CNTN3Q9P232 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CNTN3Q9P232 AC022882.1-201ENST00000532142 501 ntBASIC5.24□□□□□ -1.57
CNTN3Q9P232 MEG8-215ENST00000555354 469 ntTSL 3 BASIC5.24□□□□□ -1.57
CNTN3Q9P232 AC022726.1-201ENST00000587475 207 ntBASIC5.24□□□□□ -1.57
CNTN3Q9P232 AC016727.2-201ENST00000603988 621 ntBASIC5.24□□□□□ -1.57
CNTN3Q9P232 AL121932.1-201ENST00000605542 214 ntBASIC5.24□□□□□ -1.57
CNTN3Q9P232 AC007619.2-201ENST00000605743 379 ntBASIC5.24□□□□□ -1.57
CNTN3Q9P232 MIR6820-201ENST00000611508 62 ntBASIC5.24□□□□□ -1.57
CNTN3Q9P232 AL161616.1-201ENST00000611867 286 ntBASIC5.24□□□□□ -1.57
CNTN3Q9P232 AL450472.3-201ENST00000615578 367 ntBASIC5.24□□□□□ -1.57
CNTN3Q9P232 AL138825.1-201ENST00000618587 192 ntBASIC5.24□□□□□ -1.57
CNTN3Q9P232 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC5.24□□□□□ -1.57
CNTN3Q9P232 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CNTN3Q9P232 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CNTN3Q9P232 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CNTN3Q9P232 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.24□□□□□ -1.57
CNTN3Q9P232 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CNTN3Q9P232 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CNTN3Q9P232 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CNTN3Q9P232 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CNTN3Q9P232 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.23□□□□□ -1.57
CNTN3Q9P232 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC5.23□□□□□ -1.57
CNTN3Q9P232 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
CNTN3Q9P232 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
CNTN3Q9P232 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.23□□□□□ -1.57
CNTN3Q9P232 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
CNTN3Q9P232 RNU6-1155P-201ENST00000363554 107 ntBASIC5.23□□□□□ -1.57
CNTN3Q9P232 RNU6-26P-201ENST00000383985 107 ntBASIC5.23□□□□□ -1.57
CNTN3Q9P232 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
CNTN3Q9P232 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC5.23□□□□□ -1.57
CNTN3Q9P232 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC5.23□□□□□ -1.57
CNTN3Q9P232 AC092809.3-201ENST00000415453 231 ntBASIC5.23□□□□□ -1.57
CNTN3Q9P232 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC5.23□□□□□ -1.57
CNTN3Q9P232 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC5.23□□□□□ -1.57
CNTN3Q9P232 AC090774.1-201ENST00000435925 246 ntBASIC5.23□□□□□ -1.57
CNTN3Q9P232 RPL35AP21-201ENST00000437667 333 ntBASIC5.23□□□□□ -1.57
CNTN3Q9P232 AC005154.2-201ENST00000438110 379 ntBASIC5.23□□□□□ -1.57
CNTN3Q9P232 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC5.23□□□□□ -1.57
CNTN3Q9P232 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC5.23□□□□□ -1.57
CNTN3Q9P232 AC112492.4-201ENST00000456549 352 ntBASIC5.23□□□□□ -1.57
CNTN3Q9P232 AP000942.1-201ENST00000463969 747 ntBASIC5.23□□□□□ -1.57
CNTN3Q9P232 RN7SL558P-201ENST00000497468 299 ntBASIC5.23□□□□□ -1.57
CNTN3Q9P232 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC5.23□□□□□ -1.57
CNTN3Q9P232 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC5.23□□□□□ -1.57
CNTN3Q9P232 RN7SKP276-201ENST00000516242 268 ntBASIC5.23□□□□□ -1.57
CNTN3Q9P232 RN7SKP258-201ENST00000517151 304 ntBASIC5.23□□□□□ -1.57
CNTN3Q9P232 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC5.23□□□□□ -1.57
CNTN3Q9P232 OR4H12P-201ENST00000556269 907 ntBASIC5.23□□□□□ -1.57
CNTN3Q9P232 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC5.23□□□□□ -1.57
CNTN3Q9P232 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC5.23□□□□□ -1.57
CNTN3Q9P232 MIR5692A1-201ENST00000580523 69 ntBASIC5.23□□□□□ -1.57
CNTN3Q9P232 MIR4472-2-201ENST00000582069 67 ntBASIC5.23□□□□□ -1.57
CNTN3Q9P232 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.23□□□□□ -1.57
CNTN3Q9P232 HMGB2P1-201ENST00000591146 634 ntBASIC5.23□□□□□ -1.57
CNTN3Q9P232 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC5.23□□□□□ -1.57
CNTN3Q9P232 Z98751.3-201ENST00000604447 521 ntBASIC5.23□□□□□ -1.57
CNTN3Q9P232 RNA5SP108-201ENST00000605921 117 ntBASIC5.23□□□□□ -1.57
CNTN3Q9P232 HMGN2P28-201ENST00000606102 262 ntBASIC5.23□□□□□ -1.57
CNTN3Q9P232 FAM27B-201ENST00000610601 213 ntBASIC5.23□□□□□ -1.57
CNTN3Q9P232 MIR6780A-201ENST00000615089 68 ntBASIC5.23□□□□□ -1.57
CNTN3Q9P232 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CNTN3Q9P232 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC5.23□□□□□ -1.57
CNTN3Q9P232 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CNTN3Q9P232 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
CNTN3Q9P232 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.23□□□□□ -1.57
CNTN3Q9P232 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CNTN3Q9P232 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
CNTN3Q9P232 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC5.23□□□□□ -1.57
CNTN3Q9P232 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
CNTN3Q9P232 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CNTN3Q9P232 AC009643.2-201ENST00000603543 1448 ntBASIC5.23□□□□□ -1.57
CNTN3Q9P232 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CNTN3Q9P232 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.22□□□□□ -1.57
CNTN3Q9P232 RNU6-266P-201ENST00000364225 107 ntBASIC5.22□□□□□ -1.57
CNTN3Q9P232 Y_RNA.307-201ENST00000365022 117 ntBASIC5.22□□□□□ -1.57
CNTN3Q9P232 CRP-202ENST00000368110 667 ntTSL 3 BASIC5.22□□□□□ -1.57
CNTN3Q9P232 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CNTN3Q9P232 RNU6-14P-201ENST00000384630 106 ntBASIC5.22□□□□□ -1.57
CNTN3Q9P232 RNU6-837P-201ENST00000391056 108 ntBASIC5.22□□□□□ -1.57
CNTN3Q9P232 AC096664.2-201ENST00000411843 406 ntBASIC5.22□□□□□ -1.57
CNTN3Q9P232 AC011933.1-201ENST00000413334 321 ntBASIC5.22□□□□□ -1.57
CNTN3Q9P232 AL356968.1-201ENST00000416622 474 ntBASIC5.22□□□□□ -1.57
CNTN3Q9P232 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC5.22□□□□□ -1.57
CNTN3Q9P232 PPP1R11P2-201ENST00000423543 382 ntBASIC5.22□□□□□ -1.57
CNTN3Q9P232 RPS24P13-201ENST00000442520 397 ntBASIC5.22□□□□□ -1.57
CNTN3Q9P232 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC5.22□□□□□ -1.57
CNTN3Q9P232 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 129.5 ms