Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 RNU6-770P-201ENST00000363929 105 ntBASIC7□□□□□ -1.29
RTN4Q9NQC3 RNU6-1222P-201ENST00000384615 107 ntBASIC7□□□□□ -1.29
RTN4Q9NQC3 RN7SKP106-201ENST00000410832 272 ntBASIC7□□□□□ -1.29
RTN4Q9NQC3 BPY2DP-201ENST00000422208 265 ntBASIC7□□□□□ -1.29
RTN4Q9NQC3 AL358453.1-201ENST00000422522 250 ntBASIC7□□□□□ -1.29
RTN4Q9NQC3 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC7□□□□□ -1.29
RTN4Q9NQC3 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC7□□□□□ -1.29
RTN4Q9NQC3 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC7□□□□□ -1.29
RTN4Q9NQC3 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC7□□□□□ -1.29
RTN4Q9NQC3 ZNF525-204ENST00000491101 569 ntTSL 4 BASIC7□□□□□ -1.29
RTN4Q9NQC3 AC104564.1-201ENST00000493028 407 ntBASIC7□□□□□ -1.29
RTN4Q9NQC3 ATP5G2-205ENST00000549748 728 ntTSL 2 BASIC7□□□□□ -1.29
RTN4Q9NQC3 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC7□□□□□ -1.29
RTN4Q9NQC3 AC009163.5-201ENST00000575421 637 ntBASIC7□□□□□ -1.29
RTN4Q9NQC3 AL355877.2-201ENST00000603670 358 ntBASIC7□□□□□ -1.29
RTN4Q9NQC3 uc_338.26-201ENST00000612659 160 ntBASIC7□□□□□ -1.29
RTN4Q9NQC3 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC7□□□□□ -1.29
RTN4Q9NQC3 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC7□□□□□ -1.29
RTN4Q9NQC3 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
RTN4Q9NQC3 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC7□□□□□ -1.29
RTN4Q9NQC3 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC7□□□□□ -1.29
RTN4Q9NQC3 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC7□□□□□ -1.29
RTN4Q9NQC3 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC7□□□□□ -1.29
RTN4Q9NQC3 ADAM5-202ENST00000399789 1942 ntBASIC6.99□□□□□ -1.29
RTN4Q9NQC3 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
RTN4Q9NQC3 AL591135.1-201ENST00000401578 5914 ntBASIC6.99□□□□□ -1.29
RTN4Q9NQC3 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
RTN4Q9NQC3 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC6.99□□□□□ -1.29
RTN4Q9NQC3 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC6.99□□□□□ -1.29
RTN4Q9NQC3 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC6.99□□□□□ -1.29
RTN4Q9NQC3 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC6.99□□□□□ -1.29
RTN4Q9NQC3 Y_RNA.183-201ENST00000363882 113 ntBASIC6.99□□□□□ -1.29
RTN4Q9NQC3 RN7SKP191-201ENST00000364713 306 ntBASIC6.99□□□□□ -1.29
RTN4Q9NQC3 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC6.99□□□□□ -1.29
RTN4Q9NQC3 MTCO3P29-201ENST00000432119 779 ntBASIC6.99□□□□□ -1.29
RTN4Q9NQC3 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC6.99□□□□□ -1.29
RTN4Q9NQC3 RNU7-87P-201ENST00000459343 62 ntBASIC6.99□□□□□ -1.29
RTN4Q9NQC3 C2orf74-204ENST00000464909 726 ntAPPRIS P2 TSL 2 BASIC6.99□□□□□ -1.29
RTN4Q9NQC3 AC034236.1-201ENST00000469891 373 ntBASIC6.99□□□□□ -1.29
RTN4Q9NQC3 RNA5SP309-201ENST00000516670 106 ntBASIC6.99□□□□□ -1.29
RTN4Q9NQC3 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC6.99□□□□□ -1.29
RTN4Q9NQC3 KC877392.1-201ENST00000524855 426 ntTSL 3 BASIC6.99□□□□□ -1.29
RTN4Q9NQC3 AC021739.1-201ENST00000559631 174 ntBASIC6.99□□□□□ -1.29
RTN4Q9NQC3 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC6.99□□□□□ -1.29
RTN4Q9NQC3 RN7SL131P-201ENST00000579043 256 ntBASIC6.99□□□□□ -1.29
RTN4Q9NQC3 MIR4312-201ENST00000579909 76 ntBASIC6.99□□□□□ -1.29
RTN4Q9NQC3 RN7SL657P-201ENST00000582431 293 ntBASIC6.99□□□□□ -1.29
RTN4Q9NQC3 AC097372.5-201ENST00000623665 376 ntBASIC6.99□□□□□ -1.29
RTN4Q9NQC3 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC6.99□□□□□ -1.29
RTN4Q9NQC3 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC6.99□□□□□ -1.29
RTN4Q9NQC3 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
RTN4Q9NQC3 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC6.99□□□□□ -1.29
RTN4Q9NQC3 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
RTN4Q9NQC3 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
RTN4Q9NQC3 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC6.98□□□□□ -1.29
RTN4Q9NQC3 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC6.98□□□□□ -1.29
RTN4Q9NQC3 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC6.98□□□□□ -1.29
RTN4Q9NQC3 RBMY1HP-201ENST00000382759 1389 ntBASIC6.98□□□□□ -1.29
RTN4Q9NQC3 AP000560.1-201ENST00000624150 1937 ntBASIC6.98□□□□□ -1.29
RTN4Q9NQC3 RN7SKP185-201ENST00000362813 326 ntBASIC6.98□□□□□ -1.29
RTN4Q9NQC3 SNORD56.1-201ENST00000362913 68 ntBASIC6.98□□□□□ -1.29
RTN4Q9NQC3 RNA5SP140-201ENST00000364524 92 ntBASIC6.98□□□□□ -1.29
RTN4Q9NQC3 Y_RNA.358-201ENST00000365491 99 ntBASIC6.98□□□□□ -1.29
RTN4Q9NQC3 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
RTN4Q9NQC3 U3.52-201ENST00000384034 216 ntBASIC6.98□□□□□ -1.29
RTN4Q9NQC3 SNORA66-201ENST00000384792 133 ntBASIC6.98□□□□□ -1.29
RTN4Q9NQC3 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
RTN4Q9NQC3 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC6.98□□□□□ -1.29
RTN4Q9NQC3 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC6.98□□□□□ -1.29
RTN4Q9NQC3 SDAD1P3-201ENST00000427380 333 ntBASIC6.98□□□□□ -1.29
RTN4Q9NQC3 TRBV29OR9-2-201ENST00000427589 333 ntBASIC6.98□□□□□ -1.29
RTN4Q9NQC3 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC6.98□□□□□ -1.29
RTN4Q9NQC3 RPL21P2-201ENST00000440049 481 ntBASIC6.98□□□□□ -1.29
RTN4Q9NQC3 RPL12P3-201ENST00000440080 396 ntBASIC6.98□□□□□ -1.29
RTN4Q9NQC3 KRTAP2-5P-201ENST00000446109 396 ntBASIC6.98□□□□□ -1.29
RTN4Q9NQC3 MED28P2-201ENST00000475771 317 ntBASIC6.98□□□□□ -1.29
RTN4Q9NQC3 AC083795.1-201ENST00000491760 320 ntBASIC6.98□□□□□ -1.29
RTN4Q9NQC3 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC6.98□□□□□ -1.29
RTN4Q9NQC3 RNU2-53P-201ENST00000516257 147 ntBASIC6.98□□□□□ -1.29
RTN4Q9NQC3 RN7SKP196-201ENST00000516267 345 ntBASIC6.98□□□□□ -1.29
RTN4Q9NQC3 IGKV1D-32-201ENST00000517449 318 ntBASIC6.98□□□□□ -1.29
RTN4Q9NQC3 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC6.98□□□□□ -1.29
RTN4Q9NQC3 HSPE1P20-201ENST00000538133 289 ntBASIC6.98□□□□□ -1.29
RTN4Q9NQC3 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC6.98□□□□□ -1.29
RTN4Q9NQC3 AL391261.3-201ENST00000557194 520 ntBASIC6.98□□□□□ -1.29
RTN4Q9NQC3 AC090617.3-201ENST00000573670 475 ntBASIC6.98□□□□□ -1.29
RTN4Q9NQC3 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC6.98□□□□□ -1.29
RTN4Q9NQC3 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC6.98□□□□□ -1.29
RTN4Q9NQC3 AC125232.2-201ENST00000592457 143 ntBASIC6.98□□□□□ -1.29
RTN4Q9NQC3 RAC1P9-201ENST00000604990 392 ntBASIC6.98□□□□□ -1.29
RTN4Q9NQC3 AC090425.1-201ENST00000610007 140 ntBASIC6.98□□□□□ -1.29
RTN4Q9NQC3 AC103858.2-201ENST00000621471 543 ntBASIC6.98□□□□□ -1.29
RTN4Q9NQC3 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC6.98□□□□□ -1.29
RTN4Q9NQC3 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
RTN4Q9NQC3 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC6.98□□□□□ -1.29
RTN4Q9NQC3 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC6.98□□□□□ -1.29
RTN4Q9NQC3 AC023421.1-201ENST00000590535 1785 ntBASIC6.97□□□□□ -1.29
RTN4Q9NQC3 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC6.97□□□□□ -1.29
RTN4Q9NQC3 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC6.97□□□□□ -1.29
RTN4Q9NQC3 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms