Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.79□□□□□ -1.64
SSU72Q9NP77 MIR6889-201ENST00000613185 59 ntBASIC4.79□□□□□ -1.64
SSU72Q9NP77 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC4.79□□□□□ -1.64
SSU72Q9NP77 TEX41-280ENST00000629185 591 ntTSL 5 BASIC4.79□□□□□ -1.64
SSU72Q9NP77 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.79□□□□□ -1.64
SSU72Q9NP77 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SSU72Q9NP77 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SSU72Q9NP77 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
SSU72Q9NP77 SAGE2P-201ENST00000420011 2126 ntBASIC4.79□□□□□ -1.64
SSU72Q9NP77 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SSU72Q9NP77 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SSU72Q9NP77 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC4.79□□□□□ -1.64
SSU72Q9NP77 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.79□□□□□ -1.64
SSU72Q9NP77 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SSU72Q9NP77 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.78□□□□□ -1.64
SSU72Q9NP77 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC4.78□□□□□ -1.64
SSU72Q9NP77 AL672167.1-203ENST00000641299 2975 ntBASIC4.78□□□□□ -1.64
SSU72Q9NP77 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SSU72Q9NP77 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SSU72Q9NP77 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC4.78□□□□□ -1.64
SSU72Q9NP77 U3.2-201ENST00000362981 210 ntBASIC4.78□□□□□ -1.64
SSU72Q9NP77 RNU6-288P-201ENST00000363690 104 ntBASIC4.78□□□□□ -1.64
SSU72Q9NP77 Y_RNA.288-201ENST00000364854 92 ntBASIC4.78□□□□□ -1.64
SSU72Q9NP77 SNORD14.1-201ENST00000365609 90 ntBASIC4.78□□□□□ -1.64
SSU72Q9NP77 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
SSU72Q9NP77 CYB5AP4-201ENST00000396692 399 ntBASIC4.78□□□□□ -1.64
SSU72Q9NP77 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC4.78□□□□□ -1.64
SSU72Q9NP77 RN7SKP293-201ENST00000411389 296 ntBASIC4.78□□□□□ -1.64
SSU72Q9NP77 AL356968.1-201ENST00000416622 474 ntBASIC4.78□□□□□ -1.64
SSU72Q9NP77 PGBD4P6-201ENST00000421501 610 ntBASIC4.78□□□□□ -1.64
SSU72Q9NP77 ELOCP20-201ENST00000422460 345 ntBASIC4.78□□□□□ -1.64
SSU72Q9NP77 AC008065.1-201ENST00000428525 348 ntBASIC4.78□□□□□ -1.64
SSU72Q9NP77 AL133396.1-201ENST00000432048 687 ntBASIC4.78□□□□□ -1.64
SSU72Q9NP77 AC093414.1-201ENST00000434712 514 ntBASIC4.78□□□□□ -1.64
SSU72Q9NP77 AC004866.2-201ENST00000438285 481 ntBASIC4.78□□□□□ -1.64
SSU72Q9NP77 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC4.78□□□□□ -1.64
SSU72Q9NP77 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC4.78□□□□□ -1.64
SSU72Q9NP77 AC073910.1-201ENST00000445047 438 ntBASIC4.78□□□□□ -1.64
SSU72Q9NP77 PPIA-203ENST00000451562 544 ntTSL 2 BASIC4.78□□□□□ -1.64
SSU72Q9NP77 AP000942.1-201ENST00000463969 747 ntBASIC4.78□□□□□ -1.64
SSU72Q9NP77 PPIAP21-201ENST00000464473 501 ntBASIC4.78□□□□□ -1.64
SSU72Q9NP77 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SSU72Q9NP77 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.78□□□□□ -1.64
SSU72Q9NP77 RPS27AP13-201ENST00000498403 237 ntBASIC4.78□□□□□ -1.64
SSU72Q9NP77 AC011411.1-201ENST00000509592 876 ntBASIC4.78□□□□□ -1.64
SSU72Q9NP77 AC090151.1-201ENST00000520784 730 ntBASIC4.78□□□□□ -1.64
SSU72Q9NP77 AC009643.1-201ENST00000532030 391 ntBASIC4.78□□□□□ -1.64
SSU72Q9NP77 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC4.78□□□□□ -1.64
SSU72Q9NP77 RN7SL652P-201ENST00000577769 300 ntBASIC4.78□□□□□ -1.64
SSU72Q9NP77 AC078899.3-201ENST00000599065 212 ntBASIC4.78□□□□□ -1.64
SSU72Q9NP77 AL121932.1-201ENST00000605542 214 ntBASIC4.78□□□□□ -1.64
SSU72Q9NP77 MIR15A-201ENST00000607334 83 ntBASIC4.78□□□□□ -1.64
SSU72Q9NP77 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC4.78□□□□□ -1.64
SSU72Q9NP77 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.78□□□□□ -1.64
SSU72Q9NP77 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.78□□□□□ -1.64
SSU72Q9NP77 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.78□□□□□ -1.64
SSU72Q9NP77 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.78□□□□□ -1.64
SSU72Q9NP77 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.78□□□□□ -1.64
SSU72Q9NP77 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC4.78□□□□□ -1.64
SSU72Q9NP77 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
SSU72Q9NP77 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC4.77□□□□□ -1.65
SSU72Q9NP77 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SSU72Q9NP77 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.77□□□□□ -1.65
SSU72Q9NP77 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SSU72Q9NP77 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
SSU72Q9NP77 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SSU72Q9NP77 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SSU72Q9NP77 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
SSU72Q9NP77 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SSU72Q9NP77 Y_RNA.152-201ENST00000363578 100 ntBASIC4.77□□□□□ -1.65
SSU72Q9NP77 Y_RNA.314-201ENST00000365114 102 ntBASIC4.77□□□□□ -1.65
SSU72Q9NP77 CRP-202ENST00000368110 667 ntTSL 3 BASIC4.77□□□□□ -1.65
SSU72Q9NP77 Y_RNA.483-201ENST00000384380 101 ntBASIC4.77□□□□□ -1.65
SSU72Q9NP77 RNU6-146P-201ENST00000384602 108 ntBASIC4.77□□□□□ -1.65
SSU72Q9NP77 Y_RNA.552-201ENST00000384665 112 ntBASIC4.77□□□□□ -1.65
SSU72Q9NP77 SNORD73A-201ENST00000386062 65 ntBASIC4.77□□□□□ -1.65
SSU72Q9NP77 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
SSU72Q9NP77 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC4.77□□□□□ -1.65
SSU72Q9NP77 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.77□□□□□ -1.65
SSU72Q9NP77 AC108032.1-201ENST00000416706 207 ntBASIC4.77□□□□□ -1.65
SSU72Q9NP77 RPS17P8-201ENST00000434525 335 ntBASIC4.77□□□□□ -1.65
SSU72Q9NP77 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC4.77□□□□□ -1.65
SSU72Q9NP77 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.77□□□□□ -1.65
SSU72Q9NP77 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC4.77□□□□□ -1.65
SSU72Q9NP77 AL360271.2-201ENST00000447710 161 ntBASIC4.77□□□□□ -1.65
SSU72Q9NP77 RPL7AP28-201ENST00000464513 571 ntBASIC4.77□□□□□ -1.65
SSU72Q9NP77 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
SSU72Q9NP77 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC4.77□□□□□ -1.65
SSU72Q9NP77 VN1R104P-201ENST00000505115 1009 ntBASIC4.77□□□□□ -1.65
SSU72Q9NP77 RNA5SP446-201ENST00000515955 82 ntBASIC4.77□□□□□ -1.65
SSU72Q9NP77 RNA5SP392-201ENST00000516905 112 ntBASIC4.77□□□□□ -1.65
SSU72Q9NP77 RN7SKP258-201ENST00000517151 304 ntBASIC4.77□□□□□ -1.65
SSU72Q9NP77 AC104576.1-201ENST00000524225 88 ntBASIC4.77□□□□□ -1.65
SSU72Q9NP77 AL049839.1-201ENST00000556151 657 ntBASIC4.77□□□□□ -1.65
SSU72Q9NP77 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC4.77□□□□□ -1.65
SSU72Q9NP77 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.77□□□□□ -1.65
SSU72Q9NP77 AL022401.1-201ENST00000619498 108 ntBASIC4.77□□□□□ -1.65
SSU72Q9NP77 MIR7154-201ENST00000620673 73 ntBASIC4.77□□□□□ -1.65
SSU72Q9NP77 AC010615.1-201ENST00000594254 1764 ntBASIC4.77□□□□□ -1.65
SSU72Q9NP77 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms