Protein–RNA interactions for Protein: Q9H0I3

CCDC113, Coiled-coil domain-containing protein 113, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113Q9H0I3 AC012409.4-201ENST00000612923 249 ntBASIC4.76□□□□□ -1.65
CCDC113Q9H0I3 MIR6716-201ENST00000613413 80 ntBASIC4.76□□□□□ -1.65
CCDC113Q9H0I3 AL355810.1-201ENST00000614629 552 ntBASIC4.76□□□□□ -1.65
CCDC113Q9H0I3 AL021997.2-201ENST00000615674 271 ntBASIC4.76□□□□□ -1.65
CCDC113Q9H0I3 AL359547.2-201ENST00000615810 418 ntBASIC4.76□□□□□ -1.65
CCDC113Q9H0I3 AL359314.1-201ENST00000616913 261 ntBASIC4.76□□□□□ -1.65
CCDC113Q9H0I3 uc_338.34-201ENST00000617467 174 ntBASIC4.76□□□□□ -1.65
CCDC113Q9H0I3 AL445363.3-201ENST00000623080 671 ntBASIC4.76□□□□□ -1.65
CCDC113Q9H0I3 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.76□□□□□ -1.65
CCDC113Q9H0I3 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CCDC113Q9H0I3 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CCDC113Q9H0I3 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.76□□□□□ -1.65
CCDC113Q9H0I3 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.76□□□□□ -1.65
CCDC113Q9H0I3 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CCDC113Q9H0I3 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
CCDC113Q9H0I3 TPTE2P4-201ENST00000258589 1605 ntBASIC4.75□□□□□ -1.65
CCDC113Q9H0I3 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CCDC113Q9H0I3 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CCDC113Q9H0I3 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.75□□□□□ -1.65
CCDC113Q9H0I3 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CCDC113Q9H0I3 RNU6-845P-201ENST00000362578 103 ntBASIC4.75□□□□□ -1.65
CCDC113Q9H0I3 RNU6-288P-201ENST00000363690 104 ntBASIC4.75□□□□□ -1.65
CCDC113Q9H0I3 RNA5SP167-201ENST00000365461 116 ntBASIC4.75□□□□□ -1.65
CCDC113Q9H0I3 Y_RNA.373-201ENST00000365600 103 ntBASIC4.75□□□□□ -1.65
CCDC113Q9H0I3 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
CCDC113Q9H0I3 RNU6-510P-201ENST00000391239 108 ntBASIC4.75□□□□□ -1.65
CCDC113Q9H0I3 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CCDC113Q9H0I3 RNU2-41P-201ENST00000410991 178 ntBASIC4.75□□□□□ -1.65
CCDC113Q9H0I3 RPL23AP26-201ENST00000412728 464 ntBASIC4.75□□□□□ -1.65
CCDC113Q9H0I3 RPL21P66-201ENST00000426566 466 ntBASIC4.75□□□□□ -1.65
CCDC113Q9H0I3 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CCDC113Q9H0I3 TRAPPC2P3-201ENST00000443200 321 ntBASIC4.75□□□□□ -1.65
CCDC113Q9H0I3 IGKV1OR-3-201ENST00000446944 348 ntBASIC4.75□□□□□ -1.65
CCDC113Q9H0I3 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.75□□□□□ -1.65
CCDC113Q9H0I3 RPL37P6-201ENST00000460682 294 ntBASIC4.75□□□□□ -1.65
CCDC113Q9H0I3 AC007547.1-201ENST00000462177 490 ntBASIC4.75□□□□□ -1.65
CCDC113Q9H0I3 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC4.75□□□□□ -1.65
CCDC113Q9H0I3 AC078817.1-201ENST00000492623 435 ntBASIC4.75□□□□□ -1.65
CCDC113Q9H0I3 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CCDC113Q9H0I3 AL359273.1-201ENST00000510918 627 ntBASIC4.75□□□□□ -1.65
CCDC113Q9H0I3 AC008958.1-201ENST00000511047 682 ntBASIC4.75□□□□□ -1.65
CCDC113Q9H0I3 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CCDC113Q9H0I3 CYCSP29-201ENST00000533731 318 ntBASIC4.75□□□□□ -1.65
CCDC113Q9H0I3 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.75□□□□□ -1.65
CCDC113Q9H0I3 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC4.75□□□□□ -1.65
CCDC113Q9H0I3 MDM2-233ENST00000545204 398 ntTSL 5 BASIC4.75□□□□□ -1.65
CCDC113Q9H0I3 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.75□□□□□ -1.65
CCDC113Q9H0I3 AC078814.3-201ENST00000553036 491 ntBASIC4.75□□□□□ -1.65
CCDC113Q9H0I3 AC007424.1-203ENST00000554613 687 ntBASIC4.75□□□□□ -1.65
CCDC113Q9H0I3 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC4.75□□□□□ -1.65
CCDC113Q9H0I3 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC4.75□□□□□ -1.65
CCDC113Q9H0I3 AL138889.2-201ENST00000603883 242 ntBASIC4.75□□□□□ -1.65
CCDC113Q9H0I3 AC013553.2-201ENST00000604244 589 ntBASIC4.75□□□□□ -1.65
CCDC113Q9H0I3 AC007619.2-201ENST00000605743 379 ntBASIC4.75□□□□□ -1.65
CCDC113Q9H0I3 AP002826.1-201ENST00000608835 315 ntBASIC4.75□□□□□ -1.65
CCDC113Q9H0I3 AC112200.1-201ENST00000625015 234 ntBASIC4.75□□□□□ -1.65
CCDC113Q9H0I3 MIR3653-201ENST00000625572 110 ntBASIC4.75□□□□□ -1.65
CCDC113Q9H0I3 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC4.75□□□□□ -1.65
CCDC113Q9H0I3 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.75□□□□□ -1.65
CCDC113Q9H0I3 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CCDC113Q9H0I3 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
CCDC113Q9H0I3 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CCDC113Q9H0I3 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CCDC113Q9H0I3 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CCDC113Q9H0I3 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CCDC113Q9H0I3 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.74□□□□□ -1.65
CCDC113Q9H0I3 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CCDC113Q9H0I3 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.74□□□□□ -1.65
CCDC113Q9H0I3 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.74□□□□□ -1.65
CCDC113Q9H0I3 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
CCDC113Q9H0I3 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CCDC113Q9H0I3 Y_RNA.142-201ENST00000363491 102 ntBASIC4.74□□□□□ -1.65
CCDC113Q9H0I3 RN7SKP44-201ENST00000363602 316 ntBASIC4.74□□□□□ -1.65
CCDC113Q9H0I3 RNU6-38P-201ENST00000384085 107 ntBASIC4.74□□□□□ -1.65
CCDC113Q9H0I3 MT-TD-201ENST00000387419 68 ntBASIC4.74□□□□□ -1.65
CCDC113Q9H0I3 LAP3P1-201ENST00000403648 294 ntBASIC4.74□□□□□ -1.65
CCDC113Q9H0I3 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC4.74□□□□□ -1.65
CCDC113Q9H0I3 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.74□□□□□ -1.65
CCDC113Q9H0I3 AL645939.1-201ENST00000453429 797 ntBASIC4.74□□□□□ -1.65
CCDC113Q9H0I3 RNU6-333P-201ENST00000459117 107 ntBASIC4.74□□□□□ -1.65
CCDC113Q9H0I3 RNU7-180P-201ENST00000459240 63 ntBASIC4.74□□□□□ -1.65
CCDC113Q9H0I3 AP000926.1-201ENST00000479573 241 ntBASIC4.74□□□□□ -1.65
CCDC113Q9H0I3 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.74□□□□□ -1.65
CCDC113Q9H0I3 AC117522.3-201ENST00000507974 584 ntBASIC4.74□□□□□ -1.65
CCDC113Q9H0I3 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CCDC113Q9H0I3 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC4.74□□□□□ -1.65
CCDC113Q9H0I3 RNA5SP49-201ENST00000516450 115 ntBASIC4.74□□□□□ -1.65
CCDC113Q9H0I3 BTF3P12-201ENST00000519620 469 ntBASIC4.74□□□□□ -1.65
CCDC113Q9H0I3 AL137161.1-201ENST00000532231 390 ntBASIC4.74□□□□□ -1.65
CCDC113Q9H0I3 AC100770.1-201ENST00000532310 322 ntBASIC4.74□□□□□ -1.65
CCDC113Q9H0I3 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC4.74□□□□□ -1.65
CCDC113Q9H0I3 MED28P6-201ENST00000558776 231 ntBASIC4.74□□□□□ -1.65
CCDC113Q9H0I3 AC106782.4-201ENST00000568264 210 ntBASIC4.74□□□□□ -1.65
CCDC113Q9H0I3 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC4.74□□□□□ -1.65
CCDC113Q9H0I3 AL390240.1-201ENST00000612950 384 ntBASIC4.74□□□□□ -1.65
CCDC113Q9H0I3 AL158196.1-201ENST00000616786 434 ntBASIC4.74□□□□□ -1.65
CCDC113Q9H0I3 AC090617.10-201ENST00000624308 134 ntBASIC4.74□□□□□ -1.65
CCDC113Q9H0I3 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CCDC113Q9H0I3 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
CCDC113Q9H0I3 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms