Protein–RNA interactions for Protein: Q9H0E7

USP44, Ubiquitin carboxyl-terminal hydrolase 44, humanhuman

Predictions only

Length 712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP44Q9H0E7 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
USP44Q9H0E7 AL138885.1-201ENST00000405921 675 ntBASIC3.79□□□□□ -1.8
USP44Q9H0E7 RNU6-516P-201ENST00000411381 104 ntBASIC3.79□□□□□ -1.8
USP44Q9H0E7 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC3.79□□□□□ -1.8
USP44Q9H0E7 RPL32P35-201ENST00000415214 394 ntBASIC3.79□□□□□ -1.8
USP44Q9H0E7 NPM1P11-201ENST00000417106 855 ntBASIC3.79□□□□□ -1.8
USP44Q9H0E7 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.79□□□□□ -1.8
USP44Q9H0E7 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.79□□□□□ -1.8
USP44Q9H0E7 THAP5P1-201ENST00000439089 262 ntBASIC3.79□□□□□ -1.8
USP44Q9H0E7 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.79□□□□□ -1.8
USP44Q9H0E7 KATNBL1P6-201ENST00000453433 915 ntBASIC3.79□□□□□ -1.8
USP44Q9H0E7 AC092754.2-201ENST00000463506 460 ntBASIC3.79□□□□□ -1.8
USP44Q9H0E7 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC3.79□□□□□ -1.8
USP44Q9H0E7 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
USP44Q9H0E7 AC117532.1-201ENST00000514638 323 ntBASIC3.79□□□□□ -1.8
USP44Q9H0E7 RNU6-201P-201ENST00000517100 61 ntBASIC3.79□□□□□ -1.8
USP44Q9H0E7 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.79□□□□□ -1.8
USP44Q9H0E7 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.79□□□□□ -1.8
USP44Q9H0E7 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.79□□□□□ -1.8
USP44Q9H0E7 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.79□□□□□ -1.8
USP44Q9H0E7 AC060771.1-201ENST00000582031 164 ntBASIC3.79□□□□□ -1.8
USP44Q9H0E7 AC004908.2-201ENST00000609090 574 ntBASIC3.79□□□□□ -1.8
USP44Q9H0E7 AC093838.1-201ENST00000613014 469 ntBASIC3.79□□□□□ -1.8
USP44Q9H0E7 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC3.79□□□□□ -1.8
USP44Q9H0E7 AL162274.2-201ENST00000614406 332 ntBASIC3.79□□□□□ -1.8
USP44Q9H0E7 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.79□□□□□ -1.8
USP44Q9H0E7 AL603758.1-201ENST00000618654 241 ntBASIC3.79□□□□□ -1.8
USP44Q9H0E7 DDX10P1-201ENST00000448545 1933 ntBASIC3.79□□□□□ -1.8
USP44Q9H0E7 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
USP44Q9H0E7 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.79□□□□□ -1.8
USP44Q9H0E7 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.79□□□□□ -1.8
USP44Q9H0E7 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
USP44Q9H0E7 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.79□□□□□ -1.8
USP44Q9H0E7 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
USP44Q9H0E7 AC138915.3-201ENST00000562908 1389 ntBASIC3.78□□□□□ -1.8
USP44Q9H0E7 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
USP44Q9H0E7 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.78□□□□□ -1.8
USP44Q9H0E7 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
USP44Q9H0E7 SNORD116-9-201ENST00000384000 95 ntBASIC3.78□□□□□ -1.8
USP44Q9H0E7 SNORD116-3-201ENST00000384287 95 ntBASIC3.78□□□□□ -1.8
USP44Q9H0E7 SNORD116-7-201ENST00000384404 95 ntBASIC3.78□□□□□ -1.8
USP44Q9H0E7 SNORD116-5-201ENST00000384462 95 ntBASIC3.78□□□□□ -1.8
USP44Q9H0E7 SNORA44-201ENST00000384584 132 ntBASIC3.78□□□□□ -1.8
USP44Q9H0E7 MT-TH-201ENST00000387441 69 ntBASIC3.78□□□□□ -1.8
USP44Q9H0E7 BX119904.4-201ENST00000424402 301 ntBASIC3.78□□□□□ -1.8
USP44Q9H0E7 RPL35AP12-201ENST00000425362 338 ntBASIC3.78□□□□□ -1.8
USP44Q9H0E7 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC3.78□□□□□ -1.8
USP44Q9H0E7 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.78□□□□□ -1.8
USP44Q9H0E7 RPL37P4-201ENST00000448908 268 ntBASIC3.78□□□□□ -1.8
USP44Q9H0E7 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC3.78□□□□□ -1.8
USP44Q9H0E7 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC3.78□□□□□ -1.8
USP44Q9H0E7 AC114967.1-201ENST00000504890 259 ntBASIC3.78□□□□□ -1.8
USP44Q9H0E7 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC3.78□□□□□ -1.8
USP44Q9H0E7 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.78□□□□□ -1.8
USP44Q9H0E7 RNU1-61P-201ENST00000516107 151 ntBASIC3.78□□□□□ -1.8
USP44Q9H0E7 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
USP44Q9H0E7 AP002404.1-201ENST00000532005 451 ntBASIC3.78□□□□□ -1.8
USP44Q9H0E7 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.78□□□□□ -1.8
USP44Q9H0E7 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC3.78□□□□□ -1.8
USP44Q9H0E7 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.78□□□□□ -1.8
USP44Q9H0E7 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC3.78□□□□□ -1.8
USP44Q9H0E7 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.78□□□□□ -1.8
USP44Q9H0E7 AC068790.3-201ENST00000602988 553 ntBASIC3.78□□□□□ -1.8
USP44Q9H0E7 AC011468.4-201ENST00000603942 409 ntBASIC3.78□□□□□ -1.8
USP44Q9H0E7 AL022161.1-201ENST00000604390 213 ntBASIC3.78□□□□□ -1.8
USP44Q9H0E7 AP002826.1-201ENST00000608835 315 ntBASIC3.78□□□□□ -1.8
USP44Q9H0E7 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
USP44Q9H0E7 AC009090.3-201ENST00000616553 565 ntBASIC3.78□□□□□ -1.8
USP44Q9H0E7 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC3.78□□□□□ -1.8
USP44Q9H0E7 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
USP44Q9H0E7 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
USP44Q9H0E7 AL035425.3-201ENST00000564206 4996 ntBASIC3.78□□□□□ -1.8
USP44Q9H0E7 AC092125.1-201ENST00000562568 1995 ntBASIC3.78□□□□□ -1.8
USP44Q9H0E7 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.78□□□□□ -1.8
USP44Q9H0E7 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
USP44Q9H0E7 AC092326.2-201ENST00000624772 1561 ntBASIC3.77□□□□□ -1.81
USP44Q9H0E7 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
USP44Q9H0E7 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
USP44Q9H0E7 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
USP44Q9H0E7 RNU5F-7P-201ENST00000363696 115 ntBASIC3.77□□□□□ -1.81
USP44Q9H0E7 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
USP44Q9H0E7 SNORA26.8-201ENST00000391306 124 ntBASIC3.77□□□□□ -1.81
USP44Q9H0E7 RNA5SP293-201ENST00000410527 113 ntBASIC3.77□□□□□ -1.81
USP44Q9H0E7 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.77□□□□□ -1.81
USP44Q9H0E7 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.77□□□□□ -1.81
USP44Q9H0E7 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
USP44Q9H0E7 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC3.77□□□□□ -1.81
USP44Q9H0E7 AC090774.1-201ENST00000435925 246 ntBASIC3.77□□□□□ -1.81
USP44Q9H0E7 COX6CP2-201ENST00000444980 225 ntBASIC3.77□□□□□ -1.81
USP44Q9H0E7 RAC1P7-201ENST00000445367 377 ntBASIC3.77□□□□□ -1.81
USP44Q9H0E7 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.77□□□□□ -1.81
USP44Q9H0E7 AP000797.1-201ENST00000478870 387 ntBASIC3.77□□□□□ -1.81
USP44Q9H0E7 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
USP44Q9H0E7 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.77□□□□□ -1.81
USP44Q9H0E7 AC116347.2-201ENST00000514912 523 ntBASIC3.77□□□□□ -1.81
USP44Q9H0E7 MTND4LP18-201ENST00000526864 291 ntBASIC3.77□□□□□ -1.81
USP44Q9H0E7 MAL2-203ENST00000534619 578 ntTSL 4 BASIC3.77□□□□□ -1.81
USP44Q9H0E7 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC3.77□□□□□ -1.81
USP44Q9H0E7 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC3.77□□□□□ -1.81
USP44Q9H0E7 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms