Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC5.34□□□□□ -1.55
CNTNAP3Q9BZ76 RNA5SP171-201ENST00000391071 115 ntBASIC5.34□□□□□ -1.55
CNTNAP3Q9BZ76 RNA5SP494-201ENST00000410653 129 ntBASIC5.34□□□□□ -1.55
CNTNAP3Q9BZ76 PTGES3P4-201ENST00000426243 356 ntBASIC5.34□□□□□ -1.55
CNTNAP3Q9BZ76 AC073063.1-201ENST00000434352 607 ntBASIC5.34□□□□□ -1.55
CNTNAP3Q9BZ76 AC079168.2-201ENST00000453977 416 ntBASIC5.34□□□□□ -1.55
CNTNAP3Q9BZ76 snoU13.1-201ENST00000459157 104 ntBASIC5.34□□□□□ -1.55
CNTNAP3Q9BZ76 AC010326.1-201ENST00000462726 602 ntBASIC5.34□□□□□ -1.55
CNTNAP3Q9BZ76 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.34□□□□□ -1.55
CNTNAP3Q9BZ76 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.34□□□□□ -1.55
CNTNAP3Q9BZ76 Y_RNA.679-201ENST00000516416 91 ntBASIC5.34□□□□□ -1.55
CNTNAP3Q9BZ76 AC069113.1-201ENST00000517763 267 ntBASIC5.34□□□□□ -1.55
CNTNAP3Q9BZ76 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC5.34□□□□□ -1.55
CNTNAP3Q9BZ76 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC5.34□□□□□ -1.55
CNTNAP3Q9BZ76 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CNTNAP3Q9BZ76 CR383656.7-201ENST00000548164 174 ntBASIC5.34□□□□□ -1.55
CNTNAP3Q9BZ76 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC5.34□□□□□ -1.55
CNTNAP3Q9BZ76 TXNP4-201ENST00000575018 310 ntBASIC5.34□□□□□ -1.55
CNTNAP3Q9BZ76 MIR3613-201ENST00000579844 87 ntBASIC5.34□□□□□ -1.55
CNTNAP3Q9BZ76 AC174048.1-201ENST00000603389 144 ntBASIC5.34□□□□□ -1.55
CNTNAP3Q9BZ76 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
CNTNAP3Q9BZ76 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CNTNAP3Q9BZ76 AC022164.1-201ENST00000568767 2673 ntBASIC5.34□□□□□ -1.55
CNTNAP3Q9BZ76 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CNTNAP3Q9BZ76 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC5.34□□□□□ -1.55
CNTNAP3Q9BZ76 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CNTNAP3Q9BZ76 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
CNTNAP3Q9BZ76 AC140134.1-201ENST00000511830 3544 ntBASIC5.34□□□□□ -1.56
CNTNAP3Q9BZ76 AP001284.1-201ENST00000528393 2118 ntBASIC5.33□□□□□ -1.56
CNTNAP3Q9BZ76 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.33□□□□□ -1.56
CNTNAP3Q9BZ76 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CNTNAP3Q9BZ76 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.33□□□□□ -1.56
CNTNAP3Q9BZ76 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CNTNAP3Q9BZ76 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
CNTNAP3Q9BZ76 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.33□□□□□ -1.56
CNTNAP3Q9BZ76 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CNTNAP3Q9BZ76 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CNTNAP3Q9BZ76 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CNTNAP3Q9BZ76 AC019155.1-201ENST00000382242 574 ntBASIC5.33□□□□□ -1.56
CNTNAP3Q9BZ76 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
CNTNAP3Q9BZ76 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC5.33□□□□□ -1.56
CNTNAP3Q9BZ76 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC5.33□□□□□ -1.56
CNTNAP3Q9BZ76 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC5.33□□□□□ -1.56
CNTNAP3Q9BZ76 BX276092.4-201ENST00000452056 248 ntBASIC5.33□□□□□ -1.56
CNTNAP3Q9BZ76 AC074255.1-201ENST00000511259 501 ntBASIC5.33□□□□□ -1.56
CNTNAP3Q9BZ76 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC5.33□□□□□ -1.56
CNTNAP3Q9BZ76 TRAV32-201ENST00000553993 340 ntBASIC5.33□□□□□ -1.56
CNTNAP3Q9BZ76 AC009127.3-201ENST00000570531 403 ntBASIC5.33□□□□□ -1.56
CNTNAP3Q9BZ76 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CNTNAP3Q9BZ76 AC012616.1-201ENST00000600294 197 ntBASIC5.33□□□□□ -1.56
CNTNAP3Q9BZ76 AC240442.1-201ENST00000616055 283 ntBASIC5.33□□□□□ -1.56
CNTNAP3Q9BZ76 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC5.33□□□□□ -1.56
CNTNAP3Q9BZ76 UBA3-213ENST00000631029 123 ntTSL 5 BASIC5.33□□□□□ -1.56
CNTNAP3Q9BZ76 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CNTNAP3Q9BZ76 AC000374.1-201ENST00000434698 1745 ntBASIC5.33□□□□□ -1.56
CNTNAP3Q9BZ76 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC5.33□□□□□ -1.56
CNTNAP3Q9BZ76 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CNTNAP3Q9BZ76 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CNTNAP3Q9BZ76 AC068870.1-201ENST00000563737 2455 ntBASIC5.33□□□□□ -1.56
CNTNAP3Q9BZ76 AC110774.1-201ENST00000623567 2018 ntBASIC5.33□□□□□ -1.56
CNTNAP3Q9BZ76 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC5.33□□□□□ -1.56
CNTNAP3Q9BZ76 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
CNTNAP3Q9BZ76 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CNTNAP3Q9BZ76 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.33□□□□□ -1.56
CNTNAP3Q9BZ76 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CNTNAP3Q9BZ76 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC5.33□□□□□ -1.56
CNTNAP3Q9BZ76 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CNTNAP3Q9BZ76 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.32□□□□□ -1.56
CNTNAP3Q9BZ76 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CNTNAP3Q9BZ76 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CNTNAP3Q9BZ76 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC5.32□□□□□ -1.56
CNTNAP3Q9BZ76 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.32□□□□□ -1.56
CNTNAP3Q9BZ76 RNU6-818P-201ENST00000364837 108 ntBASIC5.32□□□□□ -1.56
CNTNAP3Q9BZ76 Y_RNA.308-201ENST00000365043 101 ntBASIC5.32□□□□□ -1.56
CNTNAP3Q9BZ76 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CNTNAP3Q9BZ76 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
CNTNAP3Q9BZ76 RNY4P18-201ENST00000391107 89 ntBASIC5.32□□□□□ -1.56
CNTNAP3Q9BZ76 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC5.32□□□□□ -1.56
CNTNAP3Q9BZ76 AL513475.1-201ENST00000406602 315 ntBASIC5.32□□□□□ -1.56
CNTNAP3Q9BZ76 MIR1250-201ENST00000408098 113 ntBASIC5.32□□□□□ -1.56
CNTNAP3Q9BZ76 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC5.32□□□□□ -1.56
CNTNAP3Q9BZ76 AL162389.1-201ENST00000449233 177 ntBASIC5.32□□□□□ -1.56
CNTNAP3Q9BZ76 AL137159.1-201ENST00000452808 512 ntBASIC5.32□□□□□ -1.56
CNTNAP3Q9BZ76 SNRPCP3-201ENST00000474888 476 ntBASIC5.32□□□□□ -1.56
CNTNAP3Q9BZ76 RPL23AP65-201ENST00000475608 468 ntBASIC5.32□□□□□ -1.56
CNTNAP3Q9BZ76 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC5.32□□□□□ -1.56
CNTNAP3Q9BZ76 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC5.32□□□□□ -1.56
CNTNAP3Q9BZ76 Y_RNA.686-201ENST00000516548 134 ntBASIC5.32□□□□□ -1.56
CNTNAP3Q9BZ76 RNU6-971P-201ENST00000516920 106 ntBASIC5.32□□□□□ -1.56
CNTNAP3Q9BZ76 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.32□□□□□ -1.56
CNTNAP3Q9BZ76 AC090151.1-201ENST00000520784 730 ntBASIC5.32□□□□□ -1.56
CNTNAP3Q9BZ76 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC5.32□□□□□ -1.56
CNTNAP3Q9BZ76 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC5.32□□□□□ -1.56
CNTNAP3Q9BZ76 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.32□□□□□ -1.56
CNTNAP3Q9BZ76 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CNTNAP3Q9BZ76 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC5.32□□□□□ -1.56
CNTNAP3Q9BZ76 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC5.32□□□□□ -1.56
CNTNAP3Q9BZ76 AC006077.1-201ENST00000604746 343 ntBASIC5.32□□□□□ -1.56
CNTNAP3Q9BZ76 TUG1_2.1-201ENST00000614234 87 ntBASIC5.32□□□□□ -1.56
CNTNAP3Q9BZ76 MIR6780A-201ENST00000615089 68 ntBASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms