Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC2.92□□□□□ -1.94
RPAP1Q9BWH6 SNORA31.1-201ENST00000515993 133 ntBASIC2.92□□□□□ -1.94
RPAP1Q9BWH6 SNORA31.5-201ENST00000516190 133 ntBASIC2.92□□□□□ -1.94
RPAP1Q9BWH6 SNORA31.15-201ENST00000516771 132 ntBASIC2.92□□□□□ -1.94
RPAP1Q9BWH6 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC2.92□□□□□ -1.94
RPAP1Q9BWH6 DEFB122-202ENST00000569013 197 ntBASIC2.92□□□□□ -1.94
RPAP1Q9BWH6 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.92□□□□□ -1.94
RPAP1Q9BWH6 DUXAP3-201ENST00000603616 594 ntBASIC2.92□□□□□ -1.94
RPAP1Q9BWH6 AC104237.2-201ENST00000612456 443 ntBASIC2.92□□□□□ -1.94
RPAP1Q9BWH6 AC120349.2-201ENST00000625002 298 ntBASIC2.92□□□□□ -1.94
RPAP1Q9BWH6 AP000720.1-201ENST00000625091 483 ntBASIC2.92□□□□□ -1.94
RPAP1Q9BWH6 MIR1291-201ENST00000627649 87 ntBASIC2.92□□□□□ -1.94
RPAP1Q9BWH6 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
RPAP1Q9BWH6 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.92□□□□□ -1.94
RPAP1Q9BWH6 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.92□□□□□ -1.94
RPAP1Q9BWH6 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
RPAP1Q9BWH6 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
RPAP1Q9BWH6 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
RPAP1Q9BWH6 OR4G11P-202ENST00000642116 1414 ntBASIC2.91□□□□□ -1.94
RPAP1Q9BWH6 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
RPAP1Q9BWH6 FAM133CP-201ENST00000332869 704 ntBASIC2.91□□□□□ -1.94
RPAP1Q9BWH6 snoZ40.1-201ENST00000364540 72 ntBASIC2.91□□□□□ -1.94
RPAP1Q9BWH6 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
RPAP1Q9BWH6 RNU6-1000P-201ENST00000391066 106 ntBASIC2.91□□□□□ -1.94
RPAP1Q9BWH6 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.91□□□□□ -1.94
RPAP1Q9BWH6 MTND2P5-201ENST00000432656 1006 ntBASIC2.91□□□□□ -1.94
RPAP1Q9BWH6 CR769767.1-201ENST00000436337 346 ntBASIC2.91□□□□□ -1.94
RPAP1Q9BWH6 AC004866.2-201ENST00000438285 481 ntBASIC2.91□□□□□ -1.94
RPAP1Q9BWH6 AC005297.2-201ENST00000450430 606 ntBASIC2.91□□□□□ -1.94
RPAP1Q9BWH6 OFD1P3Y-201ENST00000453312 783 ntBASIC2.91□□□□□ -1.94
RPAP1Q9BWH6 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.91□□□□□ -1.94
RPAP1Q9BWH6 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC2.91□□□□□ -1.94
RPAP1Q9BWH6 RPL21P131-201ENST00000497298 483 ntBASIC2.91□□□□□ -1.94
RPAP1Q9BWH6 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC2.91□□□□□ -1.94
RPAP1Q9BWH6 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC2.91□□□□□ -1.94
RPAP1Q9BWH6 RN7SKP31-201ENST00000516354 278 ntBASIC2.91□□□□□ -1.94
RPAP1Q9BWH6 SNORD59.2-201ENST00000516873 68 ntBASIC2.91□□□□□ -1.94
RPAP1Q9BWH6 RNA5SP402-201ENST00000517148 110 ntBASIC2.91□□□□□ -1.94
RPAP1Q9BWH6 AP001804.3-201ENST00000525146 880 ntBASIC2.91□□□□□ -1.94
RPAP1Q9BWH6 CR383656.7-201ENST00000548164 174 ntBASIC2.91□□□□□ -1.94
RPAP1Q9BWH6 HSPE1P3-201ENST00000559254 309 ntBASIC2.91□□□□□ -1.94
RPAP1Q9BWH6 MIR1273D-201ENST00000577266 86 ntBASIC2.91□□□□□ -1.94
RPAP1Q9BWH6 MIR4637-201ENST00000582405 84 ntBASIC2.91□□□□□ -1.94
RPAP1Q9BWH6 AC061975.8-201ENST00000587058 721 ntBASIC2.91□□□□□ -1.94
RPAP1Q9BWH6 AL606834.3-201ENST00000602615 496 ntBASIC2.91□□□□□ -1.94
RPAP1Q9BWH6 AC112220.2-201ENST00000605513 533 ntBASIC2.91□□□□□ -1.94
RPAP1Q9BWH6 AC069545.1-201ENST00000605671 358 ntBASIC2.91□□□□□ -1.94
RPAP1Q9BWH6 AC024060.1-201ENST00000607052 494 ntBASIC2.91□□□□□ -1.94
RPAP1Q9BWH6 AC010872.1-201ENST00000624225 675 ntBASIC2.91□□□□□ -1.94
RPAP1Q9BWH6 AP002371.2-201ENST00000624450 503 ntBASIC2.91□□□□□ -1.94
RPAP1Q9BWH6 AC090897.3-201ENST00000636973 1157 ntBASIC2.91□□□□□ -1.94
RPAP1Q9BWH6 AL513185.3-201ENST00000433335 1300 ntBASIC2.91□□□□□ -1.94
RPAP1Q9BWH6 RNU1-73P-201ENST00000383971 164 ntBASIC2.9□□□□□ -1.94
RPAP1Q9BWH6 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC2.9□□□□□ -1.94
RPAP1Q9BWH6 FAT1P1-201ENST00000406588 507 ntBASIC2.9□□□□□ -1.94
RPAP1Q9BWH6 BTF3P7-201ENST00000407097 488 ntBASIC2.9□□□□□ -1.94
RPAP1Q9BWH6 RNU6-1077P-201ENST00000410506 102 ntBASIC2.9□□□□□ -1.94
RPAP1Q9BWH6 ATG3P1-201ENST00000419507 911 ntBASIC2.9□□□□□ -1.94
RPAP1Q9BWH6 AL137014.1-201ENST00000420490 1226 ntBASIC2.9□□□□□ -1.94
RPAP1Q9BWH6 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC2.9□□□□□ -1.94
RPAP1Q9BWH6 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.9□□□□□ -1.94
RPAP1Q9BWH6 AC007742.1-201ENST00000425789 329 ntBASIC2.9□□□□□ -1.94
RPAP1Q9BWH6 AL590233.1-201ENST00000430017 456 ntBASIC2.9□□□□□ -1.94
RPAP1Q9BWH6 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC2.9□□□□□ -1.94
RPAP1Q9BWH6 ELOCP26-201ENST00000436067 329 ntBASIC2.9□□□□□ -1.94
RPAP1Q9BWH6 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.9□□□□□ -1.94
RPAP1Q9BWH6 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC2.9□□□□□ -1.94
RPAP1Q9BWH6 AL109741.2-201ENST00000455561 343 ntBASIC2.9□□□□□ -1.94
RPAP1Q9BWH6 RNA5SP310-201ENST00000459084 116 ntBASIC2.9□□□□□ -1.94
RPAP1Q9BWH6 AC026410.2-201ENST00000460281 156 ntBASIC2.9□□□□□ -1.94
RPAP1Q9BWH6 RPS15AP17-201ENST00000470598 390 ntBASIC2.9□□□□□ -1.94
RPAP1Q9BWH6 AC069528.1-202ENST00000482888 637 ntBASIC2.9□□□□□ -1.94
RPAP1Q9BWH6 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.9□□□□□ -1.94
RPAP1Q9BWH6 AC090453.1-201ENST00000495560 436 ntBASIC2.9□□□□□ -1.94
RPAP1Q9BWH6 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC2.9□□□□□ -1.94
RPAP1Q9BWH6 RNU6-711P-201ENST00000517255 106 ntBASIC2.9□□□□□ -1.94
RPAP1Q9BWH6 AP003467.2-201ENST00000520175 319 ntBASIC2.9□□□□□ -1.94
RPAP1Q9BWH6 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC2.9□□□□□ -1.94
RPAP1Q9BWH6 REXO2-218ENST00000544827 880 ntTSL 3 BASIC2.9□□□□□ -1.94
RPAP1Q9BWH6 AC009220.3-201ENST00000604318 586 ntBASIC2.9□□□□□ -1.94
RPAP1Q9BWH6 BNIP3P31-201ENST00000604515 566 ntBASIC2.9□□□□□ -1.94
RPAP1Q9BWH6 AL031176.1-201ENST00000604554 466 ntBASIC2.9□□□□□ -1.94
RPAP1Q9BWH6 AC012443.1-201ENST00000605605 231 ntBASIC2.9□□□□□ -1.94
RPAP1Q9BWH6 AC009570.1-201ENST00000609599 745 ntBASIC2.9□□□□□ -1.94
RPAP1Q9BWH6 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.9□□□□□ -1.94
RPAP1Q9BWH6 AC009159.1-201ENST00000618386 642 ntBASIC2.9□□□□□ -1.94
RPAP1Q9BWH6 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC2.9□□□□□ -1.94
RPAP1Q9BWH6 MIR1322-201ENST00000638013 71 ntBASIC2.9□□□□□ -1.94
RPAP1Q9BWH6 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.9□□□□□ -1.94
RPAP1Q9BWH6 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.9□□□□□ -1.95
RPAP1Q9BWH6 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
RPAP1Q9BWH6 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.9□□□□□ -1.95
RPAP1Q9BWH6 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
RPAP1Q9BWH6 AP002907.1-201ENST00000606361 1430 ntBASIC2.9□□□□□ -1.95
RPAP1Q9BWH6 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
RPAP1Q9BWH6 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
RPAP1Q9BWH6 RNU5D-1-201ENST00000363299 116 ntBASIC2.89□□□□□ -1.95
RPAP1Q9BWH6 SNORD56.5-201ENST00000364281 72 ntBASIC2.89□□□□□ -1.95
RPAP1Q9BWH6 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
RPAP1Q9BWH6 U3.37-201ENST00000408528 213 ntBASIC2.89□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms