Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
LRFN3Q9BTN0 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.26□□□□□ -1.73
LRFN3Q9BTN0 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
LRFN3Q9BTN0 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
LRFN3Q9BTN0 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
LRFN3Q9BTN0 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
LRFN3Q9BTN0 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
LRFN3Q9BTN0 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
LRFN3Q9BTN0 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
LRFN3Q9BTN0 RNU5E-8P-201ENST00000363502 116 ntBASIC4.25□□□□□ -1.73
LRFN3Q9BTN0 SNORA51.2-201ENST00000364595 132 ntBASIC4.25□□□□□ -1.73
LRFN3Q9BTN0 RNA5SP189-201ENST00000364920 115 ntBASIC4.25□□□□□ -1.73
LRFN3Q9BTN0 SNORD81.2-201ENST00000365153 76 ntBASIC4.25□□□□□ -1.73
LRFN3Q9BTN0 RNU6-169P-201ENST00000365336 107 ntBASIC4.25□□□□□ -1.73
LRFN3Q9BTN0 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
LRFN3Q9BTN0 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
LRFN3Q9BTN0 RNU6-456P-201ENST00000384493 107 ntBASIC4.25□□□□□ -1.73
LRFN3Q9BTN0 RNU6ATAC10P-201ENST00000408635 111 ntBASIC4.25□□□□□ -1.73
LRFN3Q9BTN0 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
LRFN3Q9BTN0 RPL21P24-201ENST00000413752 448 ntBASIC4.25□□□□□ -1.73
LRFN3Q9BTN0 COX5BP7-201ENST00000414780 274 ntBASIC4.25□□□□□ -1.73
LRFN3Q9BTN0 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC4.25□□□□□ -1.73
LRFN3Q9BTN0 GTF2IP20-201ENST00000431663 360 ntBASIC4.25□□□□□ -1.73
LRFN3Q9BTN0 AC090774.1-201ENST00000435925 246 ntBASIC4.25□□□□□ -1.73
LRFN3Q9BTN0 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
LRFN3Q9BTN0 HMGB3P12-201ENST00000438745 556 ntBASIC4.25□□□□□ -1.73
LRFN3Q9BTN0 MTCO3P45-201ENST00000443036 613 ntBASIC4.25□□□□□ -1.73
LRFN3Q9BTN0 NIPA2P5-201ENST00000452282 464 ntBASIC4.25□□□□□ -1.73
LRFN3Q9BTN0 AC106707.2-201ENST00000484182 374 ntBASIC4.25□□□□□ -1.73
LRFN3Q9BTN0 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC4.25□□□□□ -1.73
LRFN3Q9BTN0 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.25□□□□□ -1.73
LRFN3Q9BTN0 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC4.25□□□□□ -1.73
LRFN3Q9BTN0 RNU6-64P-201ENST00000517119 105 ntBASIC4.25□□□□□ -1.73
LRFN3Q9BTN0 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC4.25□□□□□ -1.73
LRFN3Q9BTN0 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC4.25□□□□□ -1.73
LRFN3Q9BTN0 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC4.25□□□□□ -1.73
LRFN3Q9BTN0 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC4.25□□□□□ -1.73
LRFN3Q9BTN0 AC078814.3-201ENST00000553036 491 ntBASIC4.25□□□□□ -1.73
LRFN3Q9BTN0 SUB1P2-201ENST00000556401 297 ntBASIC4.25□□□□□ -1.73
LRFN3Q9BTN0 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.25□□□□□ -1.73
LRFN3Q9BTN0 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC4.25□□□□□ -1.73
LRFN3Q9BTN0 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC4.25□□□□□ -1.73
LRFN3Q9BTN0 AC008966.2-201ENST00000606157 453 ntBASIC4.25□□□□□ -1.73
LRFN3Q9BTN0 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC4.25□□□□□ -1.73
LRFN3Q9BTN0 AL365204.3-201ENST00000612448 685 ntBASIC4.25□□□□□ -1.73
LRFN3Q9BTN0 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC4.25□□□□□ -1.73
LRFN3Q9BTN0 SNHG22-203ENST00000617833 660 ntBASIC4.25□□□□□ -1.73
LRFN3Q9BTN0 AL360181.4-201ENST00000621752 134 ntBASIC4.25□□□□□ -1.73
LRFN3Q9BTN0 AL353748.2-201ENST00000622148 471 ntBASIC4.25□□□□□ -1.73
LRFN3Q9BTN0 AC015871.5-202ENST00000623252 701 ntBASIC4.25□□□□□ -1.73
LRFN3Q9BTN0 AC009161.2-201ENST00000624626 138 ntBASIC4.25□□□□□ -1.73
LRFN3Q9BTN0 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
LRFN3Q9BTN0 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
LRFN3Q9BTN0 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.25□□□□□ -1.73
LRFN3Q9BTN0 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC4.25□□□□□ -1.73
LRFN3Q9BTN0 SRP72P2-201ENST00000344851 1979 ntBASIC4.25□□□□□ -1.73
LRFN3Q9BTN0 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
LRFN3Q9BTN0 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.25□□□□□ -1.73
LRFN3Q9BTN0 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.25□□□□□ -1.73
LRFN3Q9BTN0 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.25□□□□□ -1.73
LRFN3Q9BTN0 AC139769.1-204ENST00000472297 1931 ntBASIC4.25□□□□□ -1.73
LRFN3Q9BTN0 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
LRFN3Q9BTN0 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.25□□□□□ -1.73
LRFN3Q9BTN0 Z82217.1-201ENST00000625157 8149 ntBASIC4.24□□□□□ -1.73
LRFN3Q9BTN0 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.24□□□□□ -1.73
LRFN3Q9BTN0 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.24□□□□□ -1.73
LRFN3Q9BTN0 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
LRFN3Q9BTN0 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
LRFN3Q9BTN0 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
LRFN3Q9BTN0 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.24□□□□□ -1.73
LRFN3Q9BTN0 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
LRFN3Q9BTN0 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
LRFN3Q9BTN0 Y_RNA.58-201ENST00000362807 102 ntBASIC4.24□□□□□ -1.73
LRFN3Q9BTN0 RNU6-451P-201ENST00000362921 107 ntBASIC4.24□□□□□ -1.73
LRFN3Q9BTN0 RNU1-20P-201ENST00000363314 162 ntBASIC4.24□□□□□ -1.73
LRFN3Q9BTN0 Y_RNA.154-201ENST00000363624 102 ntBASIC4.24□□□□□ -1.73
LRFN3Q9BTN0 Y_RNA.159-201ENST00000363674 87 ntBASIC4.24□□□□□ -1.73
LRFN3Q9BTN0 RNY3P1-201ENST00000365085 102 ntBASIC4.24□□□□□ -1.73
LRFN3Q9BTN0 RNU6-282P-201ENST00000365357 103 ntBASIC4.24□□□□□ -1.73
LRFN3Q9BTN0 RNY3-201ENST00000365484 102 ntBASIC4.24□□□□□ -1.73
LRFN3Q9BTN0 Y_RNA.419-201ENST00000384041 102 ntBASIC4.24□□□□□ -1.73
LRFN3Q9BTN0 Y_RNA.490-201ENST00000384413 102 ntBASIC4.24□□□□□ -1.73
LRFN3Q9BTN0 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
LRFN3Q9BTN0 AL356432.1-201ENST00000405809 419 ntBASIC4.24□□□□□ -1.73
LRFN3Q9BTN0 RNA5SP118-201ENST00000410385 109 ntBASIC4.24□□□□□ -1.73
LRFN3Q9BTN0 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC4.24□□□□□ -1.73
LRFN3Q9BTN0 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC4.24□□□□□ -1.73
LRFN3Q9BTN0 SSXP9-201ENST00000417503 292 ntBASIC4.24□□□□□ -1.73
LRFN3Q9BTN0 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.24□□□□□ -1.73
LRFN3Q9BTN0 MTND2P23-201ENST00000422990 651 ntBASIC4.24□□□□□ -1.73
LRFN3Q9BTN0 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC4.24□□□□□ -1.73
LRFN3Q9BTN0 DUTP6-201ENST00000425573 462 ntBASIC4.24□□□□□ -1.73
LRFN3Q9BTN0 MTCO1P39-201ENST00000426148 480 ntBASIC4.24□□□□□ -1.73
LRFN3Q9BTN0 RPL7P54-201ENST00000438336 674 ntBASIC4.24□□□□□ -1.73
LRFN3Q9BTN0 MTCYBP6-201ENST00000441810 138 ntBASIC4.24□□□□□ -1.73
LRFN3Q9BTN0 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC4.24□□□□□ -1.73
LRFN3Q9BTN0 RNA5SP246-201ENST00000458909 119 ntBASIC4.24□□□□□ -1.73
LRFN3Q9BTN0 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC4.24□□□□□ -1.73
LRFN3Q9BTN0 RPL36AP51-201ENST00000487216 318 ntBASIC4.24□□□□□ -1.73
LRFN3Q9BTN0 AC139783.2-201ENST00000504847 1145 ntBASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms