Protein–RNA interactions for Protein: Q96S86

HAPLN3, Hyaluronan and proteoglycan link protein 3, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HAPLN3Q96S86 Y_RNA.142-201ENST00000363491 102 ntBASIC4.08□□□□□ -1.76
HAPLN3Q96S86 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
HAPLN3Q96S86 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
HAPLN3Q96S86 SNORA69-201ENST00000383895 132 ntBASIC4.08□□□□□ -1.76
HAPLN3Q96S86 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
HAPLN3Q96S86 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
HAPLN3Q96S86 MRPL50P2-201ENST00000416821 482 ntBASIC4.08□□□□□ -1.76
HAPLN3Q96S86 CKS1BP5-201ENST00000434172 273 ntBASIC4.08□□□□□ -1.76
HAPLN3Q96S86 MRPS18BP2-201ENST00000434310 759 ntBASIC4.08□□□□□ -1.76
HAPLN3Q96S86 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
HAPLN3Q96S86 AC093019.1-201ENST00000443135 252 ntBASIC4.08□□□□□ -1.76
HAPLN3Q96S86 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC4.08□□□□□ -1.76
HAPLN3Q96S86 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC4.08□□□□□ -1.76
HAPLN3Q96S86 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC4.08□□□□□ -1.76
HAPLN3Q96S86 RPL21P11-201ENST00000461458 483 ntBASIC4.08□□□□□ -1.76
HAPLN3Q96S86 RPS3AP50-201ENST00000487064 803 ntBASIC4.08□□□□□ -1.76
HAPLN3Q96S86 AC068305.1-201ENST00000497406 726 ntBASIC4.08□□□□□ -1.76
HAPLN3Q96S86 SNORA40.12-201ENST00000516329 111 ntBASIC4.08□□□□□ -1.76
HAPLN3Q96S86 RNA5SP337-201ENST00000517007 109 ntBASIC4.08□□□□□ -1.76
HAPLN3Q96S86 AC087369.1-201ENST00000520775 996 ntBASIC4.08□□□□□ -1.76
HAPLN3Q96S86 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC4.08□□□□□ -1.76
HAPLN3Q96S86 AP003072.2-201ENST00000527756 676 ntBASIC4.08□□□□□ -1.76
HAPLN3Q96S86 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC4.08□□□□□ -1.76
HAPLN3Q96S86 ARL2BPP2-201ENST00000550907 489 ntBASIC4.08□□□□□ -1.76
HAPLN3Q96S86 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.08□□□□□ -1.76
HAPLN3Q96S86 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.08□□□□□ -1.76
HAPLN3Q96S86 AC055876.1-202ENST00000567053 138 ntBASIC4.08□□□□□ -1.76
HAPLN3Q96S86 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC4.08□□□□□ -1.76
HAPLN3Q96S86 AL592436.1-201ENST00000605135 558 ntBASIC4.08□□□□□ -1.76
HAPLN3Q96S86 AL391261.4-201ENST00000616012 481 ntBASIC4.08□□□□□ -1.76
HAPLN3Q96S86 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
HAPLN3Q96S86 MIR6500-201ENST00000622700 86 ntBASIC4.08□□□□□ -1.76
HAPLN3Q96S86 AC024940.5-201ENST00000622889 474 ntBASIC4.08□□□□□ -1.76
HAPLN3Q96S86 Z73965.1-201ENST00000623412 2297 ntBASIC4.08□□□□□ -1.76
HAPLN3Q96S86 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.08□□□□□ -1.76
HAPLN3Q96S86 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
HAPLN3Q96S86 AC244205.2-202ENST00000635781 342 ntBASIC4.08□□□□□ -1.76
HAPLN3Q96S86 AC138649.5-201ENST00000637456 137 ntBASIC4.08□□□□□ -1.76
HAPLN3Q96S86 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC4.08□□□□□ -1.76
HAPLN3Q96S86 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
HAPLN3Q96S86 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
HAPLN3Q96S86 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
HAPLN3Q96S86 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
HAPLN3Q96S86 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.08□□□□□ -1.76
HAPLN3Q96S86 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
HAPLN3Q96S86 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
HAPLN3Q96S86 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
HAPLN3Q96S86 ZNF680P1-201ENST00000436625 1469 ntBASIC4.07□□□□□ -1.76
HAPLN3Q96S86 TNPO1P3-201ENST00000436471 2662 ntBASIC4.07□□□□□ -1.76
HAPLN3Q96S86 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
HAPLN3Q96S86 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
HAPLN3Q96S86 RNU6-213P-201ENST00000384051 104 ntBASIC4.07□□□□□ -1.76
HAPLN3Q96S86 RNU2-9P-201ENST00000410194 145 ntBASIC4.07□□□□□ -1.76
HAPLN3Q96S86 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC4.07□□□□□ -1.76
HAPLN3Q96S86 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC4.07□□□□□ -1.76
HAPLN3Q96S86 PDCL2P1-201ENST00000419302 352 ntBASIC4.07□□□□□ -1.76
HAPLN3Q96S86 ATP5HP2-201ENST00000433885 485 ntBASIC4.07□□□□□ -1.76
HAPLN3Q96S86 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
HAPLN3Q96S86 SEPT14P3-201ENST00000439401 183 ntBASIC4.07□□□□□ -1.76
HAPLN3Q96S86 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC4.07□□□□□ -1.76
HAPLN3Q96S86 AC016691.1-201ENST00000441321 413 ntBASIC4.07□□□□□ -1.76
HAPLN3Q96S86 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC4.07□□□□□ -1.76
HAPLN3Q96S86 AL732372.2-207ENST00000445840 183 ntBASIC4.07□□□□□ -1.76
HAPLN3Q96S86 NDUFS5P3-201ENST00000450668 321 ntBASIC4.07□□□□□ -1.76
HAPLN3Q96S86 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC4.07□□□□□ -1.76
HAPLN3Q96S86 SEPT14P2-201ENST00000453405 183 ntBASIC4.07□□□□□ -1.76
HAPLN3Q96S86 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.07□□□□□ -1.76
HAPLN3Q96S86 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.07□□□□□ -1.76
HAPLN3Q96S86 NIPA2P2-201ENST00000496376 1083 ntBASIC4.07□□□□□ -1.76
HAPLN3Q96S86 ACTR3BP4-201ENST00000503033 1244 ntBASIC4.07□□□□□ -1.76
HAPLN3Q96S86 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.07□□□□□ -1.76
HAPLN3Q96S86 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC4.07□□□□□ -1.76
HAPLN3Q96S86 AC010486.1-201ENST00000511793 424 ntBASIC4.07□□□□□ -1.76
HAPLN3Q96S86 SEPT14P4-201ENST00000513445 186 ntBASIC4.07□□□□□ -1.76
HAPLN3Q96S86 AC017037.2-201ENST00000513850 890 ntBASIC4.07□□□□□ -1.76
HAPLN3Q96S86 RNA5SP401-201ENST00000515920 127 ntBASIC4.07□□□□□ -1.76
HAPLN3Q96S86 RNU6-1231P-201ENST00000517185 103 ntBASIC4.07□□□□□ -1.76
HAPLN3Q96S86 RNU4-60P-201ENST00000517239 135 ntBASIC4.07□□□□□ -1.76
HAPLN3Q96S86 FO082796.1-201ENST00000523795 183 ntBASIC4.07□□□□□ -1.76
HAPLN3Q96S86 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC4.07□□□□□ -1.76
HAPLN3Q96S86 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.07□□□□□ -1.76
HAPLN3Q96S86 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC4.07□□□□□ -1.76
HAPLN3Q96S86 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC4.07□□□□□ -1.76
HAPLN3Q96S86 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC4.07□□□□□ -1.76
HAPLN3Q96S86 KC877982.1-201ENST00000602313 470 ntBASIC4.07□□□□□ -1.76
HAPLN3Q96S86 Z84480.1-201ENST00000605131 311 ntBASIC4.07□□□□□ -1.76
HAPLN3Q96S86 RNA5SP108-201ENST00000605921 117 ntBASIC4.07□□□□□ -1.76
HAPLN3Q96S86 AC007038.2-201ENST00000608095 740 ntBASIC4.07□□□□□ -1.76
HAPLN3Q96S86 OR6R2P-201ENST00000609216 300 ntBASIC4.07□□□□□ -1.76
HAPLN3Q96S86 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC4.07□□□□□ -1.76
HAPLN3Q96S86 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.07□□□□□ -1.76
HAPLN3Q96S86 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC4.07□□□□□ -1.76
HAPLN3Q96S86 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.07□□□□□ -1.76
HAPLN3Q96S86 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
HAPLN3Q96S86 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
HAPLN3Q96S86 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
HAPLN3Q96S86 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC4.06□□□□□ -1.76
HAPLN3Q96S86 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.06□□□□□ -1.76
HAPLN3Q96S86 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
HAPLN3Q96S86 AL138713.1-201ENST00000624026 2130 ntBASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 119.8 ms