Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 AL713922.2-201ENST00000619384 716 ntBASIC4.5□□□□□ -1.69
SYNPOQ8N3V7 AL357559.1-201ENST00000622228 274 ntBASIC4.5□□□□□ -1.69
SYNPOQ8N3V7 AC090617.10-201ENST00000624308 134 ntBASIC4.5□□□□□ -1.69
SYNPOQ8N3V7 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.5□□□□□ -1.69
SYNPOQ8N3V7 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
SYNPOQ8N3V7 LARP1BP1-201ENST00000506036 1359 ntBASIC4.5□□□□□ -1.69
SYNPOQ8N3V7 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
SYNPOQ8N3V7 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SYNPOQ8N3V7 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SYNPOQ8N3V7 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
SYNPOQ8N3V7 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SYNPOQ8N3V7 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
SYNPOQ8N3V7 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
SYNPOQ8N3V7 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.49□□□□□ -1.69
SYNPOQ8N3V7 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.49□□□□□ -1.69
SYNPOQ8N3V7 PNPT1P2-201ENST00000456768 2050 ntBASIC4.49□□□□□ -1.69
SYNPOQ8N3V7 AL672167.1-203ENST00000641299 2975 ntBASIC4.49□□□□□ -1.69
SYNPOQ8N3V7 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
SYNPOQ8N3V7 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.49□□□□□ -1.69
SYNPOQ8N3V7 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.49□□□□□ -1.69
SYNPOQ8N3V7 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.49□□□□□ -1.69
SYNPOQ8N3V7 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.49□□□□□ -1.69
SYNPOQ8N3V7 AL359837.1-201ENST00000381357 287 ntBASIC4.49□□□□□ -1.69
SYNPOQ8N3V7 RNU6-38P-201ENST00000384085 107 ntBASIC4.49□□□□□ -1.69
SYNPOQ8N3V7 MIR23A-201ENST00000385245 73 ntBASIC4.49□□□□□ -1.69
SYNPOQ8N3V7 BX323014.1-201ENST00000412876 237 ntBASIC4.49□□□□□ -1.69
SYNPOQ8N3V7 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.49□□□□□ -1.69
SYNPOQ8N3V7 CYP4F29P-201ENST00000420685 446 ntBASIC4.49□□□□□ -1.69
SYNPOQ8N3V7 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.49□□□□□ -1.69
SYNPOQ8N3V7 SNRPEP8-201ENST00000442866 260 ntBASIC4.49□□□□□ -1.69
SYNPOQ8N3V7 AL671855.1-201ENST00000446875 1203 ntBASIC4.49□□□□□ -1.69
SYNPOQ8N3V7 RNU6-333P-201ENST00000459117 107 ntBASIC4.49□□□□□ -1.69
SYNPOQ8N3V7 RNU7-180P-201ENST00000459240 63 ntBASIC4.49□□□□□ -1.69
SYNPOQ8N3V7 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.49□□□□□ -1.69
SYNPOQ8N3V7 DEFB109F-201ENST00000491870 277 ntBASIC4.49□□□□□ -1.69
SYNPOQ8N3V7 MTCO2P30-201ENST00000503662 364 ntBASIC4.49□□□□□ -1.69
SYNPOQ8N3V7 AC008958.1-201ENST00000511047 682 ntBASIC4.49□□□□□ -1.69
SYNPOQ8N3V7 AC010486.1-201ENST00000511793 424 ntBASIC4.49□□□□□ -1.69
SYNPOQ8N3V7 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.49□□□□□ -1.69
SYNPOQ8N3V7 RNA5SP468-201ENST00000516782 93 ntBASIC4.49□□□□□ -1.69
SYNPOQ8N3V7 RNA5SP471-201ENST00000516971 106 ntBASIC4.49□□□□□ -1.69
SYNPOQ8N3V7 RNU6-685P-201ENST00000517088 95 ntBASIC4.49□□□□□ -1.69
SYNPOQ8N3V7 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC4.49□□□□□ -1.69
SYNPOQ8N3V7 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC4.49□□□□□ -1.69
SYNPOQ8N3V7 AL137161.1-201ENST00000532231 390 ntBASIC4.49□□□□□ -1.69
SYNPOQ8N3V7 TRAV8-5-201ENST00000537369 341 ntBASIC4.49□□□□□ -1.69
SYNPOQ8N3V7 AC243972.3-201ENST00000539655 198 ntBASIC4.49□□□□□ -1.69
SYNPOQ8N3V7 MIR3690-201ENST00000580266 75 ntBASIC4.49□□□□□ -1.69
SYNPOQ8N3V7 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC4.49□□□□□ -1.69
SYNPOQ8N3V7 AC012417.1-201ENST00000582307 1039 ntBASIC4.49□□□□□ -1.69
SYNPOQ8N3V7 AC053481.4-201ENST00000583164 216 ntBASIC4.49□□□□□ -1.69
SYNPOQ8N3V7 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC4.49□□□□□ -1.69
SYNPOQ8N3V7 RNU6-89P-201ENST00000606519 100 ntBASIC4.49□□□□□ -1.69
SYNPOQ8N3V7 AC034102.8-201ENST00000615146 484 ntBASIC4.49□□□□□ -1.69
SYNPOQ8N3V7 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.49□□□□□ -1.69
SYNPOQ8N3V7 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC4.49□□□□□ -1.69
SYNPOQ8N3V7 AC005086.4-201ENST00000623065 213 ntBASIC4.49□□□□□ -1.69
SYNPOQ8N3V7 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
SYNPOQ8N3V7 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
SYNPOQ8N3V7 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
SYNPOQ8N3V7 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
SYNPOQ8N3V7 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
SYNPOQ8N3V7 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
SYNPOQ8N3V7 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
SYNPOQ8N3V7 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SYNPOQ8N3V7 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.48□□□□□ -1.69
SYNPOQ8N3V7 AC103710.2-202ENST00000641454 2853 ntBASIC4.48□□□□□ -1.69
SYNPOQ8N3V7 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
SYNPOQ8N3V7 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.48□□□□□ -1.69
SYNPOQ8N3V7 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
SYNPOQ8N3V7 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
SYNPOQ8N3V7 AC008568.2-201ENST00000623862 2313 ntBASIC4.48□□□□□ -1.69
SYNPOQ8N3V7 AL158163.1-201ENST00000603915 1649 ntBASIC4.48□□□□□ -1.69
SYNPOQ8N3V7 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
SYNPOQ8N3V7 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SYNPOQ8N3V7 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SYNPOQ8N3V7 RN7SKP202-201ENST00000410439 330 ntBASIC4.48□□□□□ -1.69
SYNPOQ8N3V7 AC080125.1-201ENST00000414888 684 ntBASIC4.48□□□□□ -1.69
SYNPOQ8N3V7 AL592045.1-201ENST00000429867 352 ntBASIC4.48□□□□□ -1.69
SYNPOQ8N3V7 RPL7P12-201ENST00000446719 750 ntBASIC4.48□□□□□ -1.69
SYNPOQ8N3V7 AL590639.1-201ENST00000456484 337 ntBASIC4.48□□□□□ -1.69
SYNPOQ8N3V7 SCARNA18-201ENST00000459004 134 ntBASIC4.48□□□□□ -1.69
SYNPOQ8N3V7 RPL21P104-201ENST00000464143 478 ntBASIC4.48□□□□□ -1.69
SYNPOQ8N3V7 RPL7P5-201ENST00000471472 736 ntBASIC4.48□□□□□ -1.69
SYNPOQ8N3V7 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.48□□□□□ -1.69
SYNPOQ8N3V7 RPS15AP34-201ENST00000487776 387 ntBASIC4.48□□□□□ -1.69
SYNPOQ8N3V7 RPL39P36-201ENST00000490784 156 ntBASIC4.48□□□□□ -1.69
SYNPOQ8N3V7 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.48□□□□□ -1.69
SYNPOQ8N3V7 RN7SL604P-201ENST00000492589 296 ntBASIC4.48□□□□□ -1.69
SYNPOQ8N3V7 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC4.48□□□□□ -1.69
SYNPOQ8N3V7 AC098591.2-201ENST00000510152 315 ntBASIC4.48□□□□□ -1.69
SYNPOQ8N3V7 SNORA31.3-201ENST00000516029 96 ntBASIC4.48□□□□□ -1.69
SYNPOQ8N3V7 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC4.48□□□□□ -1.69
SYNPOQ8N3V7 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC4.48□□□□□ -1.69
SYNPOQ8N3V7 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
SYNPOQ8N3V7 AC078814.3-201ENST00000553036 491 ntBASIC4.48□□□□□ -1.69
SYNPOQ8N3V7 AL121576.1-201ENST00000556055 276 ntBASIC4.48□□□□□ -1.69
SYNPOQ8N3V7 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC4.48□□□□□ -1.69
SYNPOQ8N3V7 MIR4286-201ENST00000580651 93 ntBASIC4.48□□□□□ -1.69
SYNPOQ8N3V7 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 116.4 ms