Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.43□□□□□ -1.7
TRIM48Q8IWZ4 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC4.43□□□□□ -1.7
TRIM48Q8IWZ4 AL356218.2-201ENST00000605264 187 ntBASIC4.43□□□□□ -1.7
TRIM48Q8IWZ4 AC091979.2-201ENST00000607514 214 ntBASIC4.43□□□□□ -1.7
TRIM48Q8IWZ4 AC103705.1-201ENST00000619013 241 ntBASIC4.43□□□□□ -1.7
TRIM48Q8IWZ4 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
TRIM48Q8IWZ4 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
TRIM48Q8IWZ4 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
TRIM48Q8IWZ4 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
TRIM48Q8IWZ4 AC104118.1-201ENST00000607625 1589 ntBASIC4.43□□□□□ -1.7
TRIM48Q8IWZ4 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
TRIM48Q8IWZ4 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
TRIM48Q8IWZ4 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
TRIM48Q8IWZ4 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
TRIM48Q8IWZ4 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
TRIM48Q8IWZ4 AC090229.1-201ENST00000590983 1609 ntBASIC4.43□□□□□ -1.7
TRIM48Q8IWZ4 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
TRIM48Q8IWZ4 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.42□□□□□ -1.7
TRIM48Q8IWZ4 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
TRIM48Q8IWZ4 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
TRIM48Q8IWZ4 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.42□□□□□ -1.7
TRIM48Q8IWZ4 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
TRIM48Q8IWZ4 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.42□□□□□ -1.7
TRIM48Q8IWZ4 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
TRIM48Q8IWZ4 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.42□□□□□ -1.7
TRIM48Q8IWZ4 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
TRIM48Q8IWZ4 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
TRIM48Q8IWZ4 OR51H2P-202ENST00000641424 3046 ntBASIC4.42□□□□□ -1.7
TRIM48Q8IWZ4 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.42□□□□□ -1.7
TRIM48Q8IWZ4 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
TRIM48Q8IWZ4 RNU4-44P-201ENST00000363050 141 ntBASIC4.42□□□□□ -1.7
TRIM48Q8IWZ4 Y_RNA.187-201ENST00000363918 113 ntBASIC4.42□□□□□ -1.7
TRIM48Q8IWZ4 Y_RNA.197-201ENST00000364004 102 ntBASIC4.42□□□□□ -1.7
TRIM48Q8IWZ4 Y_RNA.212-201ENST00000364177 102 ntBASIC4.42□□□□□ -1.7
TRIM48Q8IWZ4 MDM4-202ENST00000367180 547 ntTSL 3 BASIC4.42□□□□□ -1.7
TRIM48Q8IWZ4 Y_RNA.459-201ENST00000384251 102 ntBASIC4.42□□□□□ -1.7
TRIM48Q8IWZ4 MIR153-1-201ENST00000384914 90 ntBASIC4.42□□□□□ -1.7
TRIM48Q8IWZ4 RNU6-712P-201ENST00000410558 100 ntBASIC4.42□□□□□ -1.7
TRIM48Q8IWZ4 AC092809.3-201ENST00000415453 231 ntBASIC4.42□□□□□ -1.7
TRIM48Q8IWZ4 AL139396.1-201ENST00000421137 167 ntBASIC4.42□□□□□ -1.7
TRIM48Q8IWZ4 RPL31P12-201ENST00000422587 358 ntBASIC4.42□□□□□ -1.7
TRIM48Q8IWZ4 SKA2P1-201ENST00000425592 390 ntBASIC4.42□□□□□ -1.7
TRIM48Q8IWZ4 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
TRIM48Q8IWZ4 AL589765.3-201ENST00000446084 462 ntBASIC4.42□□□□□ -1.7
TRIM48Q8IWZ4 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.42□□□□□ -1.7
TRIM48Q8IWZ4 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC4.42□□□□□ -1.7
TRIM48Q8IWZ4 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.42□□□□□ -1.7
TRIM48Q8IWZ4 DYNLL1P5-201ENST00000467158 270 ntBASIC4.42□□□□□ -1.7
TRIM48Q8IWZ4 DEFB109F-201ENST00000491870 277 ntBASIC4.42□□□□□ -1.7
TRIM48Q8IWZ4 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC4.42□□□□□ -1.7
TRIM48Q8IWZ4 AP001086.1-201ENST00000494882 321 ntBASIC4.42□□□□□ -1.7
TRIM48Q8IWZ4 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
TRIM48Q8IWZ4 HIGD1AP13-201ENST00000509878 289 ntBASIC4.42□□□□□ -1.7
TRIM48Q8IWZ4 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.42□□□□□ -1.7
TRIM48Q8IWZ4 RNA5SP360-201ENST00000516555 118 ntBASIC4.42□□□□□ -1.7
TRIM48Q8IWZ4 RNU6-1213P-201ENST00000517075 94 ntBASIC4.42□□□□□ -1.7
TRIM48Q8IWZ4 AP006587.4-201ENST00000526053 529 ntBASIC4.42□□□□□ -1.7
TRIM48Q8IWZ4 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC4.42□□□□□ -1.7
TRIM48Q8IWZ4 AC093012.1-202ENST00000549403 582 ntBASIC4.42□□□□□ -1.7
TRIM48Q8IWZ4 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC4.42□□□□□ -1.7
TRIM48Q8IWZ4 AL161713.1-201ENST00000555538 145 ntBASIC4.42□□□□□ -1.7
TRIM48Q8IWZ4 AC007151.1-201ENST00000572774 483 ntBASIC4.42□□□□□ -1.7
TRIM48Q8IWZ4 AL138889.2-201ENST00000603883 242 ntBASIC4.42□□□□□ -1.7
TRIM48Q8IWZ4 AC008121.3-201ENST00000618726 433 ntBASIC4.42□□□□□ -1.7
TRIM48Q8IWZ4 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
TRIM48Q8IWZ4 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
TRIM48Q8IWZ4 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
TRIM48Q8IWZ4 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
TRIM48Q8IWZ4 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
TRIM48Q8IWZ4 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.42□□□□□ -1.7
TRIM48Q8IWZ4 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.42□□□□□ -1.7
TRIM48Q8IWZ4 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
TRIM48Q8IWZ4 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.41□□□□□ -1.7
TRIM48Q8IWZ4 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.41□□□□□ -1.7
TRIM48Q8IWZ4 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.41□□□□□ -1.7
TRIM48Q8IWZ4 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
TRIM48Q8IWZ4 AC125257.1-201ENST00000560400 2930 ntBASIC4.41□□□□□ -1.7
TRIM48Q8IWZ4 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.41□□□□□ -1.7
TRIM48Q8IWZ4 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
TRIM48Q8IWZ4 RNU6-1155P-201ENST00000363554 107 ntBASIC4.41□□□□□ -1.7
TRIM48Q8IWZ4 RNU6-1188P-201ENST00000363795 107 ntBASIC4.41□□□□□ -1.7
TRIM48Q8IWZ4 SNORA62-201ENST00000365493 153 ntBASIC4.41□□□□□ -1.7
TRIM48Q8IWZ4 SNORD116-11-201ENST00000383882 92 ntBASIC4.41□□□□□ -1.7
TRIM48Q8IWZ4 SNORA16.2-201ENST00000390991 127 ntBASIC4.41□□□□□ -1.7
TRIM48Q8IWZ4 CISD1P1-201ENST00000393907 327 ntBASIC4.41□□□□□ -1.7
TRIM48Q8IWZ4 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.41□□□□□ -1.7
TRIM48Q8IWZ4 CALM2P2-201ENST00000428512 440 ntBASIC4.41□□□□□ -1.7
TRIM48Q8IWZ4 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC4.41□□□□□ -1.7
TRIM48Q8IWZ4 HMGB3P22-202ENST00000451823 572 ntBASIC4.41□□□□□ -1.7
TRIM48Q8IWZ4 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC4.41□□□□□ -1.7
TRIM48Q8IWZ4 MTCO3P10-201ENST00000455912 772 ntBASIC4.41□□□□□ -1.7
TRIM48Q8IWZ4 RPL7AP28-201ENST00000464513 571 ntBASIC4.41□□□□□ -1.7
TRIM48Q8IWZ4 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.41□□□□□ -1.7
TRIM48Q8IWZ4 SRP72-202ENST00000504757 745 ntTSL 2 BASIC4.41□□□□□ -1.7
TRIM48Q8IWZ4 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC4.41□□□□□ -1.7
TRIM48Q8IWZ4 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC4.41□□□□□ -1.7
TRIM48Q8IWZ4 Y_RNA.689-201ENST00000516589 107 ntBASIC4.41□□□□□ -1.7
TRIM48Q8IWZ4 AC008489.1-201ENST00000524271 483 ntBASIC4.41□□□□□ -1.7
TRIM48Q8IWZ4 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.41□□□□□ -1.7
TRIM48Q8IWZ4 AC022882.1-201ENST00000532142 501 ntBASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms