Protein–RNA interactions for Protein: Q6NT89

TRNP1, TMF-regulated nuclear protein 1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRNP1Q6NT89 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.4□□□□□ -1.86
TRNP1Q6NT89 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
TRNP1Q6NT89 Y_RNA.296-201ENST00000364930 108 ntBASIC3.4□□□□□ -1.87
TRNP1Q6NT89 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
TRNP1Q6NT89 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
TRNP1Q6NT89 RNU6-629P-201ENST00000384061 103 ntBASIC3.4□□□□□ -1.87
TRNP1Q6NT89 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.4□□□□□ -1.87
TRNP1Q6NT89 MIR548F1-201ENST00000408667 84 ntBASIC3.4□□□□□ -1.87
TRNP1Q6NT89 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC3.4□□□□□ -1.87
TRNP1Q6NT89 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC3.4□□□□□ -1.87
TRNP1Q6NT89 SSXP9-201ENST00000417503 292 ntBASIC3.4□□□□□ -1.87
TRNP1Q6NT89 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC3.4□□□□□ -1.87
TRNP1Q6NT89 AC233728.2-201ENST00000425348 757 ntBASIC3.4□□□□□ -1.87
TRNP1Q6NT89 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC3.4□□□□□ -1.87
TRNP1Q6NT89 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.4□□□□□ -1.87
TRNP1Q6NT89 USP9YP15-201ENST00000442391 422 ntBASIC3.4□□□□□ -1.87
TRNP1Q6NT89 AC079448.1-201ENST00000449377 373 ntBASIC3.4□□□□□ -1.87
TRNP1Q6NT89 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.4□□□□□ -1.87
TRNP1Q6NT89 HMGN1P18-201ENST00000457642 277 ntBASIC3.4□□□□□ -1.87
TRNP1Q6NT89 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.4□□□□□ -1.87
TRNP1Q6NT89 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
TRNP1Q6NT89 RBM43P1-201ENST00000476891 1081 ntBASIC3.4□□□□□ -1.87
TRNP1Q6NT89 S100A11P1-201ENST00000477525 312 ntBASIC3.4□□□□□ -1.87
TRNP1Q6NT89 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC3.4□□□□□ -1.87
TRNP1Q6NT89 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC3.4□□□□□ -1.87
TRNP1Q6NT89 AC114797.1-201ENST00000514003 728 ntBASIC3.4□□□□□ -1.87
TRNP1Q6NT89 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
TRNP1Q6NT89 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC3.4□□□□□ -1.87
TRNP1Q6NT89 MTCO2P4-201ENST00000517968 247 ntBASIC3.4□□□□□ -1.87
TRNP1Q6NT89 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC3.4□□□□□ -1.87
TRNP1Q6NT89 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.4□□□□□ -1.87
TRNP1Q6NT89 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC3.4□□□□□ -1.87
TRNP1Q6NT89 SETP2-201ENST00000553886 926 ntBASIC3.4□□□□□ -1.87
TRNP1Q6NT89 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.4□□□□□ -1.87
TRNP1Q6NT89 MIR3146-201ENST00000580367 79 ntBASIC3.4□□□□□ -1.87
TRNP1Q6NT89 MIR3682-201ENST00000581338 84 ntBASIC3.4□□□□□ -1.87
TRNP1Q6NT89 Z83843.1-201ENST00000604070 3685 ntBASIC3.4□□□□□ -1.87
TRNP1Q6NT89 AL158211.4-201ENST00000606988 584 ntBASIC3.4□□□□□ -1.87
TRNP1Q6NT89 OR6R2P-201ENST00000609216 300 ntBASIC3.4□□□□□ -1.87
TRNP1Q6NT89 AC069200.1-201ENST00000609511 323 ntBASIC3.4□□□□□ -1.87
TRNP1Q6NT89 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.4□□□□□ -1.87
TRNP1Q6NT89 AL158209.2-201ENST00000619266 216 ntBASIC3.4□□□□□ -1.87
TRNP1Q6NT89 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.4□□□□□ -1.87
TRNP1Q6NT89 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
TRNP1Q6NT89 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
TRNP1Q6NT89 AL356489.2-201ENST00000566968 3528 ntBASIC3.39□□□□□ -1.87
TRNP1Q6NT89 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.39□□□□□ -1.87
TRNP1Q6NT89 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.39□□□□□ -1.87
TRNP1Q6NT89 AC244517.1-201ENST00000606030 2086 ntBASIC3.39□□□□□ -1.87
TRNP1Q6NT89 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC3.39□□□□□ -1.87
TRNP1Q6NT89 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.39□□□□□ -1.87
TRNP1Q6NT89 Y_RNA.6-201ENST00000362350 114 ntBASIC3.39□□□□□ -1.87
TRNP1Q6NT89 RNU6-1078P-201ENST00000364522 103 ntBASIC3.39□□□□□ -1.87
TRNP1Q6NT89 RNA5SP267-201ENST00000364893 126 ntBASIC3.39□□□□□ -1.87
TRNP1Q6NT89 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
TRNP1Q6NT89 MIR135A2-201ENST00000384854 100 ntBASIC3.39□□□□□ -1.87
TRNP1Q6NT89 MIR19A-201ENST00000384878 82 ntBASIC3.39□□□□□ -1.87
TRNP1Q6NT89 FCF1P9-201ENST00000412546 282 ntBASIC3.39□□□□□ -1.87
TRNP1Q6NT89 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC3.39□□□□□ -1.87
TRNP1Q6NT89 DNAJC19P4-201ENST00000440115 345 ntBASIC3.39□□□□□ -1.87
TRNP1Q6NT89 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC3.39□□□□□ -1.87
TRNP1Q6NT89 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC3.39□□□□□ -1.87
TRNP1Q6NT89 AC093899.1-201ENST00000457984 376 ntBASIC3.39□□□□□ -1.87
TRNP1Q6NT89 RPL7L1P8-201ENST00000469911 741 ntBASIC3.39□□□□□ -1.87
TRNP1Q6NT89 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
TRNP1Q6NT89 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC3.39□□□□□ -1.87
TRNP1Q6NT89 RNU6-314P-201ENST00000516574 104 ntBASIC3.39□□□□□ -1.87
TRNP1Q6NT89 RNU6-1231P-201ENST00000517185 103 ntBASIC3.39□□□□□ -1.87
TRNP1Q6NT89 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC3.39□□□□□ -1.87
TRNP1Q6NT89 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.39□□□□□ -1.87
TRNP1Q6NT89 DEFB108A-201ENST00000530110 222 ntBASIC3.39□□□□□ -1.87
TRNP1Q6NT89 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
TRNP1Q6NT89 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.39□□□□□ -1.87
TRNP1Q6NT89 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.39□□□□□ -1.87
TRNP1Q6NT89 OR4T1P-201ENST00000554933 911 ntBASIC3.39□□□□□ -1.87
TRNP1Q6NT89 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC3.39□□□□□ -1.87
TRNP1Q6NT89 AL391840.1-201ENST00000571144 367 ntBASIC3.39□□□□□ -1.87
TRNP1Q6NT89 MIR98-201ENST00000606724 119 ntBASIC3.39□□□□□ -1.87
TRNP1Q6NT89 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.39□□□□□ -1.87
TRNP1Q6NT89 AL590282.1-201ENST00000610379 1136 ntBASIC3.39□□□□□ -1.87
TRNP1Q6NT89 AC019176.2-201ENST00000611579 315 ntBASIC3.39□□□□□ -1.87
TRNP1Q6NT89 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.39□□□□□ -1.87
TRNP1Q6NT89 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
TRNP1Q6NT89 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
TRNP1Q6NT89 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
TRNP1Q6NT89 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
TRNP1Q6NT89 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC3.38□□□□□ -1.87
TRNP1Q6NT89 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.38□□□□□ -1.87
TRNP1Q6NT89 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
TRNP1Q6NT89 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
TRNP1Q6NT89 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
TRNP1Q6NT89 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
TRNP1Q6NT89 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
TRNP1Q6NT89 RNU1-75P-201ENST00000347264 129 ntBASIC3.38□□□□□ -1.87
TRNP1Q6NT89 RNU6-282P-201ENST00000365357 103 ntBASIC3.38□□□□□ -1.87
TRNP1Q6NT89 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC3.38□□□□□ -1.87
TRNP1Q6NT89 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC3.38□□□□□ -1.87
TRNP1Q6NT89 MIR23B-201ENST00000384832 97 ntBASIC3.38□□□□□ -1.87
TRNP1Q6NT89 RNU6-837P-201ENST00000391056 108 ntBASIC3.38□□□□□ -1.87
TRNP1Q6NT89 RPL23AP32-201ENST00000395315 459 ntBASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms