Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 AC026801.1-201ENST00000497178 464 ntBASIC0.88□□□□□ -2.27
UBR4Q5T4S7 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC0.88□□□□□ -2.27
UBR4Q5T4S7 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC0.88□□□□□ -2.27
UBR4Q5T4S7 SNORD53B-201ENST00000577887 78 ntBASIC0.88□□□□□ -2.27
UBR4Q5T4S7 AC013553.2-201ENST00000604244 589 ntBASIC0.88□□□□□ -2.27
UBR4Q5T4S7 AL592494.3-201ENST00000609485 464 ntBASIC0.88□□□□□ -2.27
UBR4Q5T4S7 RBM12B-AS1-201ENST00000623283 653 ntBASIC0.88□□□□□ -2.27
UBR4Q5T4S7 AC010297.1-201ENST00000623948 149 ntBASIC0.88□□□□□ -2.27
UBR4Q5T4S7 AC010889.1-201ENST00000566193 2666 ntBASIC0.88□□□□□ -2.27
UBR4Q5T4S7 AL596028.1-201ENST00000326971 197 ntBASIC0.88□□□□□ -2.27
UBR4Q5T4S7 Y_RNA.490-201ENST00000384413 102 ntBASIC0.88□□□□□ -2.27
UBR4Q5T4S7 AL121972.1-201ENST00000402023 252 ntBASIC0.88□□□□□ -2.27
UBR4Q5T4S7 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.88□□□□□ -2.27
UBR4Q5T4S7 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC0.88□□□□□ -2.27
UBR4Q5T4S7 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC0.88□□□□□ -2.27
UBR4Q5T4S7 SNORA70.14-201ENST00000516205 110 ntBASIC0.88□□□□□ -2.27
UBR4Q5T4S7 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC0.88□□□□□ -2.27
UBR4Q5T4S7 AC103710.2-202ENST00000641454 2853 ntBASIC0.88□□□□□ -2.27
UBR4Q5T4S7 AC020633.1-201ENST00000468439 2247 ntBASIC0.88□□□□□ -2.27
UBR4Q5T4S7 AC009501.3-201ENST00000605001 1352 ntBASIC0.88□□□□□ -2.27
UBR4Q5T4S7 METTL21EP-201ENST00000298105 713 ntBASIC0.88□□□□□ -2.27
UBR4Q5T4S7 RNA5SP338-201ENST00000410495 85 ntBASIC0.88□□□□□ -2.27
UBR4Q5T4S7 TOMM22P1-201ENST00000418578 312 ntBASIC0.88□□□□□ -2.27
UBR4Q5T4S7 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC0.88□□□□□ -2.27
UBR4Q5T4S7 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC0.88□□□□□ -2.27
UBR4Q5T4S7 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC0.88□□□□□ -2.27
UBR4Q5T4S7 AC004486.1-201ENST00000546846 233 ntBASIC0.88□□□□□ -2.27
UBR4Q5T4S7 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC0.88□□□□□ -2.27
UBR4Q5T4S7 AP000811.1-201ENST00000603803 651 ntBASIC0.88□□□□□ -2.27
UBR4Q5T4S7 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC0.88□□□□□ -2.27
UBR4Q5T4S7 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC0.88□□□□□ -2.27
UBR4Q5T4S7 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC0.88□□□□□ -2.27
UBR4Q5T4S7 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC0.87□□□□□ -2.27
UBR4Q5T4S7 Z86062.1-201ENST00000406773 777 ntBASIC0.87□□□□□ -2.27
UBR4Q5T4S7 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
UBR4Q5T4S7 Pinc.1-201ENST00000616452 154 ntBASIC0.87□□□□□ -2.27
UBR4Q5T4S7 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC0.87□□□□□ -2.27
UBR4Q5T4S7 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC0.87□□□□□ -2.27
UBR4Q5T4S7 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC0.87□□□□□ -2.27
UBR4Q5T4S7 ATP6V0E1P3-201ENST00000420036 246 ntBASIC0.87□□□□□ -2.27
UBR4Q5T4S7 AC084364.2-201ENST00000546924 395 ntBASIC0.87□□□□□ -2.27
UBR4Q5T4S7 MIR4711-201ENST00000578274 70 ntBASIC0.87□□□□□ -2.27
UBR4Q5T4S7 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC0.87□□□□□ -2.27
UBR4Q5T4S7 AC111188.2-201ENST00000529697 1387 ntBASIC0.87□□□□□ -2.27
UBR4Q5T4S7 HMGB1P13-201ENST00000406019 642 ntBASIC0.87□□□□□ -2.27
UBR4Q5T4S7 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC0.87□□□□□ -2.27
UBR4Q5T4S7 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC0.87□□□□□ -2.27
UBR4Q5T4S7 AC009901.1-201ENST00000506703 541 ntBASIC0.87□□□□□ -2.27
UBR4Q5T4S7 Y_RNA.778-201ENST00000620203 90 ntBASIC0.87□□□□□ -2.27
UBR4Q5T4S7 SGO1P2-201ENST00000429458 1589 ntBASIC0.87□□□□□ -2.27
UBR4Q5T4S7 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
UBR4Q5T4S7 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC0.87□□□□□ -2.27
UBR4Q5T4S7 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC0.87□□□□□ -2.27
UBR4Q5T4S7 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC0.87□□□□□ -2.27
UBR4Q5T4S7 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC0.87□□□□□ -2.27
UBR4Q5T4S7 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC0.87□□□□□ -2.27
UBR4Q5T4S7 SNORD88.1-201ENST00000408684 91 ntBASIC0.86□□□□□ -2.27
UBR4Q5T4S7 RN7SKP101-201ENST00000411376 320 ntBASIC0.86□□□□□ -2.27
UBR4Q5T4S7 OR7L1P-201ENST00000456181 380 ntBASIC0.86□□□□□ -2.27
UBR4Q5T4S7 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC0.86□□□□□ -2.27
UBR4Q5T4S7 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC0.86□□□□□ -2.27
UBR4Q5T4S7 Y_RNA.55-201ENST00000362797 102 ntBASIC0.86□□□□□ -2.27
UBR4Q5T4S7 RPL23AP29-201ENST00000397284 453 ntBASIC0.86□□□□□ -2.27
UBR4Q5T4S7 RNA5SP489-201ENST00000410986 109 ntBASIC0.86□□□□□ -2.27
UBR4Q5T4S7 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC0.86□□□□□ -2.27
UBR4Q5T4S7 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
UBR4Q5T4S7 MTCYBP19-201ENST00000517463 1124 ntBASIC0.86□□□□□ -2.27
UBR4Q5T4S7 AC012119.1-201ENST00000603184 222 ntBASIC0.86□□□□□ -2.27
UBR4Q5T4S7 VN1R7P-201ENST00000619242 903 ntBASIC0.86□□□□□ -2.27
UBR4Q5T4S7 NF1-214ENST00000490416 1329 ntTSL 3 BASIC0.86□□□□□ -2.27
UBR4Q5T4S7 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
UBR4Q5T4S7 SNORA67.6-201ENST00000391093 99 ntBASIC0.86□□□□□ -2.27
UBR4Q5T4S7 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC0.86□□□□□ -2.27
UBR4Q5T4S7 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC0.86□□□□□ -2.27
UBR4Q5T4S7 uc_338.22-201ENST00000622722 187 ntBASIC0.86□□□□□ -2.27
UBR4Q5T4S7 CENPCP1-201ENST00000533085 2578 ntBASIC0.86□□□□□ -2.27
UBR4Q5T4S7 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC0.86□□□□□ -2.27
UBR4Q5T4S7 BNIP3P4-201ENST00000604946 565 ntBASIC0.86□□□□□ -2.27
UBR4Q5T4S7 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC0.86□□□□□ -2.27
UBR4Q5T4S7 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC0.86□□□□□ -2.27
UBR4Q5T4S7 OR5H6-203ENST00000642105 978 ntBASIC0.86□□□□□ -2.27
UBR4Q5T4S7 MTCO1P14-201ENST00000441695 1559 ntBASIC0.86□□□□□ -2.27
UBR4Q5T4S7 Y_RNA.403-201ENST00000383977 101 ntBASIC0.85□□□□□ -2.27
UBR4Q5T4S7 OR10R1P-201ENST00000441524 1141 ntBASIC0.85□□□□□ -2.27
UBR4Q5T4S7 CBX3P2-202ENST00000583365 535 ntBASIC0.85□□□□□ -2.27
UBR4Q5T4S7 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC0.85□□□□□ -2.27
UBR4Q5T4S7 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
UBR4Q5T4S7 AL513331.1-201ENST00000411908 397 ntBASIC0.85□□□□□ -2.27
UBR4Q5T4S7 OR51A5P-201ENST00000415429 942 ntBASIC0.85□□□□□ -2.27
UBR4Q5T4S7 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC0.85□□□□□ -2.27
UBR4Q5T4S7 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC0.85□□□□□ -2.27
UBR4Q5T4S7 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC0.85□□□□□ -2.27
UBR4Q5T4S7 FGF7P3-201ENST00000454645 303 ntBASIC0.85□□□□□ -2.27
UBR4Q5T4S7 RPL9P33-201ENST00000484311 566 ntBASIC0.85□□□□□ -2.27
UBR4Q5T4S7 SNORA14.1-201ENST00000516113 141 ntBASIC0.85□□□□□ -2.27
UBR4Q5T4S7 AC005156.1-201ENST00000613371 573 ntBASIC0.85□□□□□ -2.27
UBR4Q5T4S7 U3.37-201ENST00000408528 213 ntBASIC0.85□□□□□ -2.27
UBR4Q5T4S7 MUPP-201ENST00000438111 566 ntBASIC0.85□□□□□ -2.27
UBR4Q5T4S7 RPL31P58-201ENST00000469001 379 ntBASIC0.85□□□□□ -2.27
UBR4Q5T4S7 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC0.85□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms