Protein–RNA interactions for Protein: Q12864

CDH17, Cadherin-17, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17Q12864 AC009163.5-201ENST00000575421 637 ntBASIC2.51□□□□□ -2.01
CDH17Q12864 MIR4319-201ENST00000577285 85 ntBASIC2.51□□□□□ -2.01
CDH17Q12864 AL390838.2-201ENST00000602394 274 ntBASIC2.51□□□□□ -2.01
CDH17Q12864 AL158163.2-201ENST00000619110 700 ntBASIC2.51□□□□□ -2.01
CDH17Q12864 U4.3-201ENST00000621047 82 ntBASIC2.51□□□□□ -2.01
CDH17Q12864 AC004009.2-201ENST00000623016 728 ntBASIC2.51□□□□□ -2.01
CDH17Q12864 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
CDH17Q12864 AC010872.1-201ENST00000624225 675 ntBASIC2.51□□□□□ -2.01
CDH17Q12864 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC2.51□□□□□ -2.01
CDH17Q12864 AC106858.1-201ENST00000637497 429 ntBASIC2.51□□□□□ -2.01
CDH17Q12864 MIR1322-201ENST00000638013 71 ntBASIC2.51□□□□□ -2.01
CDH17Q12864 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
CDH17Q12864 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
CDH17Q12864 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.5□□□□□ -2.01
CDH17Q12864 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.5□□□□□ -2.01
CDH17Q12864 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
CDH17Q12864 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.5□□□□□ -2.01
CDH17Q12864 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.5□□□□□ -2.01
CDH17Q12864 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
CDH17Q12864 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
CDH17Q12864 AC062016.1-201ENST00000355719 319 ntBASIC2.5□□□□□ -2.01
CDH17Q12864 Y_RNA.408-201ENST00000383987 102 ntBASIC2.5□□□□□ -2.01
CDH17Q12864 RNA5SP184-201ENST00000411071 108 ntBASIC2.5□□□□□ -2.01
CDH17Q12864 AC007742.1-201ENST00000425789 329 ntBASIC2.5□□□□□ -2.01
CDH17Q12864 MTND2P5-201ENST00000432656 1006 ntBASIC2.5□□□□□ -2.01
CDH17Q12864 ELOCP26-201ENST00000436067 329 ntBASIC2.5□□□□□ -2.01
CDH17Q12864 TAAR7P-201ENST00000436141 242 ntBASIC2.5□□□□□ -2.01
CDH17Q12864 RPL26P6-201ENST00000440913 438 ntBASIC2.5□□□□□ -2.01
CDH17Q12864 AC009296.1-201ENST00000443146 155 ntBASIC2.5□□□□□ -2.01
CDH17Q12864 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC2.5□□□□□ -2.01
CDH17Q12864 RNU7-23P-201ENST00000459465 62 ntBASIC2.5□□□□□ -2.01
CDH17Q12864 AC073901.1-201ENST00000462471 408 ntBASIC2.5□□□□□ -2.01
CDH17Q12864 RPL31P41-201ENST00000477967 372 ntBASIC2.5□□□□□ -2.01
CDH17Q12864 AC104982.1-201ENST00000478775 574 ntBASIC2.5□□□□□ -2.01
CDH17Q12864 RPS15AP34-201ENST00000487776 387 ntBASIC2.5□□□□□ -2.01
CDH17Q12864 TMEM251P1-201ENST00000503717 318 ntBASIC2.5□□□□□ -2.01
CDH17Q12864 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC2.5□□□□□ -2.01
CDH17Q12864 RNU6-1225P-201ENST00000516336 65 ntBASIC2.5□□□□□ -2.01
CDH17Q12864 AC103783.1-201ENST00000520506 373 ntBASIC2.5□□□□□ -2.01
CDH17Q12864 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.5□□□□□ -2.01
CDH17Q12864 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC2.5□□□□□ -2.01
CDH17Q12864 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.5□□□□□ -2.01
CDH17Q12864 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC2.5□□□□□ -2.01
CDH17Q12864 HSPE1P3-201ENST00000559254 309 ntBASIC2.5□□□□□ -2.01
CDH17Q12864 AC010546.1-201ENST00000569391 485 ntBASIC2.5□□□□□ -2.01
CDH17Q12864 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.5□□□□□ -2.01
CDH17Q12864 MIR4637-201ENST00000582405 84 ntBASIC2.5□□□□□ -2.01
CDH17Q12864 DUXAP11-201ENST00000603858 526 ntBASIC2.5□□□□□ -2.01
CDH17Q12864 AC024560.3-201ENST00000608482 349 ntBASIC2.5□□□□□ -2.01
CDH17Q12864 AC024257.5-201ENST00000612739 531 ntBASIC2.5□□□□□ -2.01
CDH17Q12864 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC2.5□□□□□ -2.01
CDH17Q12864 AC123767.1-202ENST00000620407 817 ntBASIC2.5□□□□□ -2.01
CDH17Q12864 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.5□□□□□ -2.01
CDH17Q12864 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.5□□□□□ -2.01
CDH17Q12864 SDAD1P2-201ENST00000441308 2028 ntBASIC2.5□□□□□ -2.01
CDH17Q12864 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.5□□□□□ -2.01
CDH17Q12864 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
CDH17Q12864 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
CDH17Q12864 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.5□□□□□ -2.01
CDH17Q12864 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.49□□□□□ -2.01
CDH17Q12864 AC135776.4-201ENST00000624300 1904 ntBASIC2.49□□□□□ -2.01
CDH17Q12864 RNU5A-1-201ENST00000362698 116 ntBASIC2.49□□□□□ -2.01
CDH17Q12864 Y_RNA.111-201ENST00000363248 100 ntBASIC2.49□□□□□ -2.01
CDH17Q12864 RNU6-270P-201ENST00000364131 105 ntBASIC2.49□□□□□ -2.01
CDH17Q12864 SET-203ENST00000372688 801 ntTSL 2 BASIC2.49□□□□□ -2.01
CDH17Q12864 SNORA41-201ENST00000384675 132 ntBASIC2.49□□□□□ -2.01
CDH17Q12864 MIR196B-201ENST00000384852 84 ntBASIC2.49□□□□□ -2.01
CDH17Q12864 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
CDH17Q12864 SNORA40.2-201ENST00000390847 128 ntBASIC2.49□□□□□ -2.01
CDH17Q12864 DHFRP6-201ENST00000401776 268 ntBASIC2.49□□□□□ -2.01
CDH17Q12864 AL449283.1-202ENST00000418249 604 ntBASIC2.49□□□□□ -2.01
CDH17Q12864 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC2.49□□□□□ -2.01
CDH17Q12864 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.49□□□□□ -2.01
CDH17Q12864 AL590233.1-201ENST00000430017 456 ntBASIC2.49□□□□□ -2.01
CDH17Q12864 AC098826.1-201ENST00000433943 471 ntBASIC2.49□□□□□ -2.01
CDH17Q12864 AL714022.1-201ENST00000439897 151 ntBASIC2.49□□□□□ -2.01
CDH17Q12864 AC104389.3-201ENST00000445629 235 ntBASIC2.49□□□□□ -2.01
CDH17Q12864 TRGVB-201ENST00000453257 471 ntBASIC2.49□□□□□ -2.01
CDH17Q12864 OFD1P3Y-201ENST00000453312 783 ntBASIC2.49□□□□□ -2.01
CDH17Q12864 AL109741.2-201ENST00000455561 343 ntBASIC2.49□□□□□ -2.01
CDH17Q12864 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC2.49□□□□□ -2.01
CDH17Q12864 RPL23AP45-201ENST00000476406 468 ntBASIC2.49□□□□□ -2.01
CDH17Q12864 AC116337.2-201ENST00000477662 156 ntBASIC2.49□□□□□ -2.01
CDH17Q12864 KC877373.1-201ENST00000479066 408 ntBASIC2.49□□□□□ -2.01
CDH17Q12864 AC069528.1-202ENST00000482888 637 ntBASIC2.49□□□□□ -2.01
CDH17Q12864 AC079203.1-201ENST00000487972 404 ntBASIC2.49□□□□□ -2.01
CDH17Q12864 AC023424.2-201ENST00000493479 777 ntBASIC2.49□□□□□ -2.01
CDH17Q12864 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC2.49□□□□□ -2.01
CDH17Q12864 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC2.49□□□□□ -2.01
CDH17Q12864 RNA5SP320-201ENST00000516263 124 ntBASIC2.49□□□□□ -2.01
CDH17Q12864 RNU6-1282P-201ENST00000516735 96 ntBASIC2.49□□□□□ -2.01
CDH17Q12864 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
CDH17Q12864 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.49□□□□□ -2.01
CDH17Q12864 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC2.49□□□□□ -2.01
CDH17Q12864 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC2.49□□□□□ -2.01
CDH17Q12864 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
CDH17Q12864 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC2.49□□□□□ -2.01
CDH17Q12864 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC2.49□□□□□ -2.01
CDH17Q12864 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC2.49□□□□□ -2.01
CDH17Q12864 HIGD1AP17-201ENST00000554576 276 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms