Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.48□□□□□ -1.85
CLCNKAP51800 MTND5P26-201ENST00000426018 1752 ntBASIC3.48□□□□□ -1.85
CLCNKAP51800 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CLCNKAP51800 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CLCNKAP51800 RNA5SP42-201ENST00000364278 115 ntBASIC3.48□□□□□ -1.85
CLCNKAP51800 RNU6-629P-201ENST00000384061 103 ntBASIC3.48□□□□□ -1.85
CLCNKAP51800 MIR183-201ENST00000384958 110 ntBASIC3.48□□□□□ -1.85
CLCNKAP51800 Y_RNA.582-201ENST00000391023 95 ntBASIC3.48□□□□□ -1.85
CLCNKAP51800 RNA5SP44-201ENST00000410446 133 ntBASIC3.48□□□□□ -1.85
CLCNKAP51800 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.48□□□□□ -1.85
CLCNKAP51800 AC002075.2-201ENST00000425207 252 ntBASIC3.48□□□□□ -1.85
CLCNKAP51800 AL451062.2-201ENST00000427515 271 ntBASIC3.48□□□□□ -1.85
CLCNKAP51800 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC3.48□□□□□ -1.85
CLCNKAP51800 ATP5JP1-201ENST00000431631 322 ntBASIC3.48□□□□□ -1.85
CLCNKAP51800 NEK4P1-201ENST00000433383 879 ntBASIC3.48□□□□□ -1.85
CLCNKAP51800 USP9YP28-201ENST00000435142 589 ntBASIC3.48□□□□□ -1.85
CLCNKAP51800 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.48□□□□□ -1.85
CLCNKAP51800 RAC1P7-201ENST00000445367 377 ntBASIC3.48□□□□□ -1.85
CLCNKAP51800 AC007967.1-201ENST00000455422 1159 ntBASIC3.48□□□□□ -1.85
CLCNKAP51800 SRRM1P2-201ENST00000464531 1192 ntBASIC3.48□□□□□ -1.85
CLCNKAP51800 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CLCNKAP51800 AC026784.1-201ENST00000507986 352 ntBASIC3.48□□□□□ -1.85
CLCNKAP51800 AC107934.1-201ENST00000522215 217 ntBASIC3.48□□□□□ -1.85
CLCNKAP51800 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.48□□□□□ -1.85
CLCNKAP51800 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.48□□□□□ -1.85
CLCNKAP51800 NTS-203ENST00000551529 801 ntTSL 3 BASIC3.48□□□□□ -1.85
CLCNKAP51800 AL121603.1-201ENST00000553815 142 ntBASIC3.48□□□□□ -1.85
CLCNKAP51800 SETP2-201ENST00000553886 926 ntBASIC3.48□□□□□ -1.85
CLCNKAP51800 AL163153.1-201ENST00000554223 283 ntBASIC3.48□□□□□ -1.85
CLCNKAP51800 MIR3118-1-201ENST00000581787 76 ntBASIC3.48□□□□□ -1.85
CLCNKAP51800 SNORD84-203ENST00000584275 78 ntBASIC3.48□□□□□ -1.85
CLCNKAP51800 AC068790.3-201ENST00000602988 553 ntBASIC3.48□□□□□ -1.85
CLCNKAP51800 AC121334.2-201ENST00000605387 271 ntBASIC3.48□□□□□ -1.85
CLCNKAP51800 AC103710.1-201ENST00000610003 901 ntBASIC3.48□□□□□ -1.85
CLCNKAP51800 BX664608.1-201ENST00000610519 487 ntBASIC3.48□□□□□ -1.85
CLCNKAP51800 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CLCNKAP51800 AL592295.2-201ENST00000612578 206 ntBASIC3.48□□□□□ -1.85
CLCNKAP51800 PISRT1-201ENST00000626175 531 ntBASIC3.48□□□□□ -1.85
CLCNKAP51800 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.48□□□□□ -1.85
CLCNKAP51800 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
CLCNKAP51800 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.48□□□□□ -1.85
CLCNKAP51800 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CLCNKAP51800 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.48□□□□□ -1.85
CLCNKAP51800 FARSBP1-201ENST00000435808 1778 ntBASIC3.48□□□□□ -1.85
CLCNKAP51800 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CLCNKAP51800 AC027514.1-201ENST00000588561 1603 ntBASIC3.48□□□□□ -1.85
CLCNKAP51800 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.48□□□□□ -1.85
CLCNKAP51800 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CLCNKAP51800 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
CLCNKAP51800 RPL7P26-201ENST00000333817 754 ntBASIC3.47□□□□□ -1.85
CLCNKAP51800 RNY4P16-201ENST00000364768 94 ntBASIC3.47□□□□□ -1.85
CLCNKAP51800 RN7SKP226-201ENST00000364912 300 ntBASIC3.47□□□□□ -1.85
CLCNKAP51800 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.47□□□□□ -1.85
CLCNKAP51800 MIR135A2-201ENST00000384854 100 ntBASIC3.47□□□□□ -1.85
CLCNKAP51800 AC093578.1-201ENST00000415219 368 ntBASIC3.47□□□□□ -1.85
CLCNKAP51800 SSXP9-201ENST00000417503 292 ntBASIC3.47□□□□□ -1.85
CLCNKAP51800 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.47□□□□□ -1.85
CLCNKAP51800 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC3.47□□□□□ -1.85
CLCNKAP51800 AC019097.1-201ENST00000424783 735 ntBASIC3.47□□□□□ -1.85
CLCNKAP51800 AC233728.2-201ENST00000425348 757 ntBASIC3.47□□□□□ -1.85
CLCNKAP51800 YME1L1P1-201ENST00000429435 297 ntBASIC3.47□□□□□ -1.85
CLCNKAP51800 AL358934.1-201ENST00000432346 324 ntBASIC3.47□□□□□ -1.85
CLCNKAP51800 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.47□□□□□ -1.85
CLCNKAP51800 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.47□□□□□ -1.85
CLCNKAP51800 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC3.47□□□□□ -1.85
CLCNKAP51800 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.47□□□□□ -1.85
CLCNKAP51800 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC3.47□□□□□ -1.85
CLCNKAP51800 snoU13.4-201ENST00000458916 104 ntBASIC3.47□□□□□ -1.85
CLCNKAP51800 RN7SL594P-201ENST00000470590 287 ntBASIC3.47□□□□□ -1.85
CLCNKAP51800 RPS27AP1-201ENST00000475545 471 ntBASIC3.47□□□□□ -1.85
CLCNKAP51800 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC3.47□□□□□ -1.85
CLCNKAP51800 RNU6-1095P-201ENST00000516148 108 ntBASIC3.47□□□□□ -1.85
CLCNKAP51800 AL133271.1-201ENST00000538229 291 ntBASIC3.47□□□□□ -1.85
CLCNKAP51800 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.47□□□□□ -1.85
CLCNKAP51800 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.47□□□□□ -1.85
CLCNKAP51800 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.47□□□□□ -1.85
CLCNKAP51800 AP001429.1-201ENST00000602568 530 ntBASIC3.47□□□□□ -1.85
CLCNKAP51800 RMST_8.1-201ENST00000610287 165 ntBASIC3.47□□□□□ -1.85
CLCNKAP51800 AC095031.1-201ENST00000623685 672 ntBASIC3.47□□□□□ -1.85
CLCNKAP51800 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC3.47□□□□□ -1.85
CLCNKAP51800 RIOK3P1-201ENST00000418778 1528 ntBASIC3.47□□□□□ -1.85
CLCNKAP51800 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC3.47□□□□□ -1.85
CLCNKAP51800 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CLCNKAP51800 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.47□□□□□ -1.85
CLCNKAP51800 CEP170P1-201ENST00000502249 4587 ntBASIC3.47□□□□□ -1.85
CLCNKAP51800 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.47□□□□□ -1.85
CLCNKAP51800 AC073073.2-201ENST00000609827 2578 ntBASIC3.47□□□□□ -1.85
CLCNKAP51800 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.46□□□□□ -1.85
CLCNKAP51800 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.85
CLCNKAP51800 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
CLCNKAP51800 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
CLCNKAP51800 RNU5E-1-201ENST00000362477 120 ntBASIC3.46□□□□□ -1.86
CLCNKAP51800 RNU6-1078P-201ENST00000364522 103 ntBASIC3.46□□□□□ -1.86
CLCNKAP51800 RNU5A-6P-201ENST00000384136 116 ntBASIC3.46□□□□□ -1.86
CLCNKAP51800 RNU6-517P-201ENST00000384362 110 ntBASIC3.46□□□□□ -1.86
CLCNKAP51800 MIR19A-201ENST00000384878 82 ntBASIC3.46□□□□□ -1.86
CLCNKAP51800 RNU6-648P-201ENST00000410190 107 ntBASIC3.46□□□□□ -1.86
CLCNKAP51800 RN7SKP53-201ENST00000411337 315 ntBASIC3.46□□□□□ -1.86
CLCNKAP51800 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC3.46□□□□□ -1.86
CLCNKAP51800 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms