Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.22□□□□□ -1.57
RNF144AP50876 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
RNF144AP50876 UBE2L2-201ENST00000254302 429 ntBASIC5.22□□□□□ -1.57
RNF144AP50876 RNA5SP510-201ENST00000364697 99 ntBASIC5.22□□□□□ -1.57
RNF144AP50876 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
RNF144AP50876 SNORD63-201ENST00000384262 68 ntBASIC5.22□□□□□ -1.57
RNF144AP50876 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
RNF144AP50876 RNU6-918P-201ENST00000391219 106 ntBASIC5.22□□□□□ -1.57
RNF144AP50876 RNU6-651P-201ENST00000411040 105 ntBASIC5.22□□□□□ -1.57
RNF144AP50876 RNU2-61P-201ENST00000411069 191 ntBASIC5.22□□□□□ -1.57
RNF144AP50876 RNU6-1135P-201ENST00000411083 103 ntBASIC5.22□□□□□ -1.57
RNF144AP50876 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC5.22□□□□□ -1.57
RNF144AP50876 BMS1P22-201ENST00000414726 313 ntBASIC5.22□□□□□ -1.57
RNF144AP50876 AL035660.1-201ENST00000422041 222 ntBASIC5.22□□□□□ -1.57
RNF144AP50876 RPL21P40-201ENST00000428586 483 ntBASIC5.22□□□□□ -1.57
RNF144AP50876 MTCO1P5-201ENST00000433573 344 ntBASIC5.22□□□□□ -1.57
RNF144AP50876 RPL36AP39-201ENST00000445859 318 ntBASIC5.22□□□□□ -1.57
RNF144AP50876 NUTF2P3-201ENST00000448540 384 ntBASIC5.22□□□□□ -1.57
RNF144AP50876 OR2A1-AS1-202ENST00000467944 422 ntBASIC5.22□□□□□ -1.57
RNF144AP50876 AC010683.1-201ENST00000473673 378 ntBASIC5.22□□□□□ -1.57
RNF144AP50876 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.22□□□□□ -1.57
RNF144AP50876 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC5.22□□□□□ -1.57
RNF144AP50876 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC5.22□□□□□ -1.57
RNF144AP50876 SNORA70.20-201ENST00000516848 126 ntBASIC5.22□□□□□ -1.57
RNF144AP50876 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC5.22□□□□□ -1.57
RNF144AP50876 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC5.22□□□□□ -1.57
RNF144AP50876 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.22□□□□□ -1.57
RNF144AP50876 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC5.22□□□□□ -1.57
RNF144AP50876 AC137627.1-201ENST00000545761 289 ntBASIC5.22□□□□□ -1.57
RNF144AP50876 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC5.22□□□□□ -1.57
RNF144AP50876 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.22□□□□□ -1.57
RNF144AP50876 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC5.22□□□□□ -1.57
RNF144AP50876 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5.22□□□□□ -1.57
RNF144AP50876 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.22□□□□□ -1.57
RNF144AP50876 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.22□□□□□ -1.57
RNF144AP50876 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.22□□□□□ -1.57
RNF144AP50876 MIR1910-201ENST00000636955 80 ntBASIC5.22□□□□□ -1.57
RNF144AP50876 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
RNF144AP50876 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC5.22□□□□□ -1.57
RNF144AP50876 AL022311.1-201ENST00000623726 19416 ntBASIC5.22□□□□□ -1.57
RNF144AP50876 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC5.22□□□□□ -1.57
RNF144AP50876 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
RNF144AP50876 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC5.22□□□□□ -1.57
RNF144AP50876 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
RNF144AP50876 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.22□□□□□ -1.57
RNF144AP50876 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
RNF144AP50876 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC5.21□□□□□ -1.57
RNF144AP50876 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
RNF144AP50876 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
RNF144AP50876 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
RNF144AP50876 NCAPGP1-201ENST00000505112 1814 ntBASIC5.21□□□□□ -1.58
RNF144AP50876 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.21□□□□□ -1.58
RNF144AP50876 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
RNF144AP50876 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
RNF144AP50876 MIR301A-201ENST00000385261 86 ntBASIC5.21□□□□□ -1.58
RNF144AP50876 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
RNF144AP50876 AC005042.1-201ENST00000393397 800 ntBASIC5.21□□□□□ -1.58
RNF144AP50876 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.21□□□□□ -1.58
RNF144AP50876 MIR1282-201ENST00000408865 101 ntBASIC5.21□□□□□ -1.58
RNF144AP50876 RPL23AP36-201ENST00000413895 458 ntBASIC5.21□□□□□ -1.58
RNF144AP50876 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC5.21□□□□□ -1.58
RNF144AP50876 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC5.21□□□□□ -1.58
RNF144AP50876 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.21□□□□□ -1.58
RNF144AP50876 HSPD1P21-201ENST00000436541 245 ntBASIC5.21□□□□□ -1.58
RNF144AP50876 IGHV5-78-201ENST00000450948 295 ntBASIC5.21□□□□□ -1.58
RNF144AP50876 AL356981.1-201ENST00000454879 684 ntBASIC5.21□□□□□ -1.58
RNF144AP50876 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
RNF144AP50876 AP001324.2-201ENST00000461163 319 ntBASIC5.21□□□□□ -1.58
RNF144AP50876 RPL23AP65-201ENST00000475608 468 ntBASIC5.21□□□□□ -1.58
RNF144AP50876 AK3P2-201ENST00000507976 429 ntBASIC5.21□□□□□ -1.58
RNF144AP50876 AL157871.3-201ENST00000557231 293 ntBASIC5.21□□□□□ -1.58
RNF144AP50876 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.21□□□□□ -1.58
RNF144AP50876 COX6CP7-201ENST00000597056 208 ntBASIC5.21□□□□□ -1.58
RNF144AP50876 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC5.21□□□□□ -1.58
RNF144AP50876 MIR4496-201ENST00000635896 61 ntBASIC5.21□□□□□ -1.58
RNF144AP50876 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
RNF144AP50876 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC5.21□□□□□ -1.58
RNF144AP50876 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
RNF144AP50876 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
RNF144AP50876 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC5.21□□□□□ -1.58
RNF144AP50876 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.21□□□□□ -1.58
RNF144AP50876 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
RNF144AP50876 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.21□□□□□ -1.58
RNF144AP50876 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.21□□□□□ -1.58
RNF144AP50876 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
RNF144AP50876 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC5.21□□□□□ -1.58
RNF144AP50876 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RNF144AP50876 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RNF144AP50876 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RNF144AP50876 AC107027.3-201ENST00000565095 3473 ntBASIC5.2□□□□□ -1.58
RNF144AP50876 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.2□□□□□ -1.58
RNF144AP50876 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
RNF144AP50876 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
RNF144AP50876 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
RNF144AP50876 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.2□□□□□ -1.58
RNF144AP50876 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
RNF144AP50876 RNU6-923P-201ENST00000364753 107 ntBASIC5.2□□□□□ -1.58
RNF144AP50876 RNU6-395P-201ENST00000365662 106 ntBASIC5.2□□□□□ -1.58
RNF144AP50876 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC5.2□□□□□ -1.58
RNF144AP50876 AC008065.1-201ENST00000428525 348 ntBASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms