Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 AC245036.5-201ENST00000596330 847 ntBASIC2.39□□□□□ -2.03
CXCL12P48061 AC055876.5-201ENST00000605667 259 ntBASIC2.39□□□□□ -2.03
CXCL12P48061 AC097504.2-201ENST00000608088 454 ntBASIC2.39□□□□□ -2.03
CXCL12P48061 AL121895.2-201ENST00000619558 447 ntBASIC2.39□□□□□ -2.03
CXCL12P48061 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
CXCL12P48061 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
CXCL12P48061 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
CXCL12P48061 RNU6-1074P-201ENST00000383995 104 ntBASIC2.38□□□□□ -2.03
CXCL12P48061 SNORD51-201ENST00000384320 80 ntBASIC2.38□□□□□ -2.03
CXCL12P48061 RNU6-878P-201ENST00000384578 110 ntBASIC2.38□□□□□ -2.03
CXCL12P48061 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
CXCL12P48061 MOB4-205ENST00000409916 829 ntTSL 3 BASIC2.38□□□□□ -2.03
CXCL12P48061 RN7SKP140-201ENST00000411196 284 ntBASIC2.38□□□□□ -2.03
CXCL12P48061 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC2.38□□□□□ -2.03
CXCL12P48061 AL354692.1-201ENST00000423044 315 ntBASIC2.38□□□□□ -2.03
CXCL12P48061 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC2.38□□□□□ -2.03
CXCL12P48061 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
CXCL12P48061 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC2.38□□□□□ -2.03
CXCL12P48061 MTCYBP11-201ENST00000447254 1109 ntBASIC2.38□□□□□ -2.03
CXCL12P48061 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC2.38□□□□□ -2.03
CXCL12P48061 AC005297.2-201ENST00000450430 606 ntBASIC2.38□□□□□ -2.03
CXCL12P48061 snoU109.4-201ENST00000458953 143 ntBASIC2.38□□□□□ -2.03
CXCL12P48061 RPS15AP17-201ENST00000470598 390 ntBASIC2.38□□□□□ -2.03
CXCL12P48061 RPL23AP42-201ENST00000471152 471 ntBASIC2.38□□□□□ -2.03
CXCL12P48061 AC098799.2-201ENST00000509466 868 ntBASIC2.38□□□□□ -2.03
CXCL12P48061 AC008716.1-201ENST00000511084 513 ntBASIC2.38□□□□□ -2.03
CXCL12P48061 CA1-215ENST00000522389 551 ntTSL 3 BASIC2.38□□□□□ -2.03
CXCL12P48061 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC2.38□□□□□ -2.03
CXCL12P48061 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC2.38□□□□□ -2.03
CXCL12P48061 BNIP3P24-201ENST00000593398 557 ntBASIC2.38□□□□□ -2.03
CXCL12P48061 RPL23AP88-201ENST00000605759 454 ntBASIC2.38□□□□□ -2.03
CXCL12P48061 AL136370.1-201ENST00000608166 691 ntBASIC2.38□□□□□ -2.03
CXCL12P48061 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC2.38□□□□□ -2.03
CXCL12P48061 AL138478.1-201ENST00000612252 832 ntBASIC2.38□□□□□ -2.03
CXCL12P48061 AC104763.3-201ENST00000613765 618 ntBASIC2.38□□□□□ -2.03
CXCL12P48061 OR1S1-201ENST00000624470 978 ntBASIC2.38□□□□□ -2.03
CXCL12P48061 AP000676.4-201ENST00000624659 623 ntBASIC2.38□□□□□ -2.03
CXCL12P48061 AL445984.1-201ENST00000637834 659 ntBASIC2.38□□□□□ -2.03
CXCL12P48061 LINC02211-204ENST00000642024 1070 ntBASIC2.38□□□□□ -2.03
CXCL12P48061 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.38□□□□□ -2.03
CXCL12P48061 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
CXCL12P48061 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.37□□□□□ -2.03
CXCL12P48061 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
CXCL12P48061 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.37□□□□□ -2.03
CXCL12P48061 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
CXCL12P48061 MTND5P19-201ENST00000424872 1794 ntBASIC2.37□□□□□ -2.03
CXCL12P48061 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
CXCL12P48061 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
CXCL12P48061 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC2.37□□□□□ -2.03
CXCL12P48061 AL591034.1-201ENST00000407447 340 ntBASIC2.37□□□□□ -2.03
CXCL12P48061 RNU4-65P-201ENST00000410473 140 ntBASIC2.37□□□□□ -2.03
CXCL12P48061 RPL19P1-201ENST00000411635 428 ntBASIC2.37□□□□□ -2.03
CXCL12P48061 AC068533.2-201ENST00000411872 306 ntBASIC2.37□□□□□ -2.03
CXCL12P48061 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.37□□□□□ -2.03
CXCL12P48061 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC2.37□□□□□ -2.03
CXCL12P48061 NANOGP2-201ENST00000435391 727 ntBASIC2.37□□□□□ -2.03
CXCL12P48061 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.37□□□□□ -2.03
CXCL12P48061 RPL23AP76-201ENST00000441860 458 ntBASIC2.37□□□□□ -2.03
CXCL12P48061 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC2.37□□□□□ -2.03
CXCL12P48061 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC2.37□□□□□ -2.03
CXCL12P48061 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC2.37□□□□□ -2.03
CXCL12P48061 TMEM251P1-201ENST00000503717 318 ntBASIC2.37□□□□□ -2.03
CXCL12P48061 AC104090.1-201ENST00000506341 1171 ntBASIC2.37□□□□□ -2.03
CXCL12P48061 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC2.37□□□□□ -2.03
CXCL12P48061 HMGB1P28-201ENST00000507778 552 ntBASIC2.37□□□□□ -2.03
CXCL12P48061 AC116337.1-201ENST00000509680 687 ntBASIC2.37□□□□□ -2.03
CXCL12P48061 AC008837.2-201ENST00000513076 418 ntBASIC2.37□□□□□ -2.03
CXCL12P48061 RNA5SP458-201ENST00000516188 119 ntBASIC2.37□□□□□ -2.03
CXCL12P48061 RNA5SP468-201ENST00000516782 93 ntBASIC2.37□□□□□ -2.03
CXCL12P48061 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC2.37□□□□□ -2.03
CXCL12P48061 AP001330.4-201ENST00000604350 154 ntBASIC2.37□□□□□ -2.03
CXCL12P48061 AC010738.1-201ENST00000604970 987 ntBASIC2.37□□□□□ -2.03
CXCL12P48061 AL391834.2-201ENST00000609982 546 ntBASIC2.37□□□□□ -2.03
CXCL12P48061 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC2.37□□□□□ -2.03
CXCL12P48061 AC022306.3-201ENST00000619930 550 ntBASIC2.37□□□□□ -2.03
CXCL12P48061 AL353748.2-201ENST00000622148 471 ntBASIC2.37□□□□□ -2.03
CXCL12P48061 AC010608.3-201ENST00000625048 527 ntBASIC2.37□□□□□ -2.03
CXCL12P48061 MIR1322-201ENST00000638013 71 ntBASIC2.37□□□□□ -2.03
CXCL12P48061 CDR1-202ENST00000625883 1485 ntBASIC2.37□□□□□ -2.03
CXCL12P48061 OR4G2P-202ENST00000641004 1759 ntBASIC2.36□□□□□ -2.03
CXCL12P48061 AC069528.2-201ENST00000624849 1991 ntBASIC2.36□□□□□ -2.03
CXCL12P48061 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.36□□□□□ -2.03
CXCL12P48061 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
CXCL12P48061 OFD1P1Y-201ENST00000411756 1225 ntBASIC2.36□□□□□ -2.03
CXCL12P48061 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC2.36□□□□□ -2.03
CXCL12P48061 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC2.36□□□□□ -2.03
CXCL12P48061 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC2.36□□□□□ -2.03
CXCL12P48061 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.36□□□□□ -2.03
CXCL12P48061 EXOSC3P1-201ENST00000448649 500 ntBASIC2.36□□□□□ -2.03
CXCL12P48061 TRGVB-201ENST00000453257 471 ntBASIC2.36□□□□□ -2.03
CXCL12P48061 snoU109.3-201ENST00000459477 145 ntBASIC2.36□□□□□ -2.03
CXCL12P48061 AC026410.2-201ENST00000460281 156 ntBASIC2.36□□□□□ -2.03
CXCL12P48061 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC2.36□□□□□ -2.03
CXCL12P48061 AC104164.3-201ENST00000467363 1258 ntBASIC2.36□□□□□ -2.03
CXCL12P48061 TRBV1-201ENST00000476502 284 ntBASIC2.36□□□□□ -2.03
CXCL12P48061 RPL21P131-201ENST00000497298 483 ntBASIC2.36□□□□□ -2.03
CXCL12P48061 MTCYBP17-201ENST00000503579 789 ntBASIC2.36□□□□□ -2.03
CXCL12P48061 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC2.36□□□□□ -2.03
CXCL12P48061 AC010625.1-201ENST00000511296 403 ntBASIC2.36□□□□□ -2.03
CXCL12P48061 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.36□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 118.4 ms